Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_I21
(1033 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, mem... 35 0.56
AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, mem... 35 0.56
AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein pro... 35 0.56
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 33 1.7
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 33 1.7
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 33 1.7
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 32 3.0
AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrom... 31 5.2
AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein. 31 5.2
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 31 6.8
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 31 6.8
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 31 6.8
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 31 6.8
>BC040943-1|AAH40943.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.56
Identities = 26/89 (29%), Positives = 30/89 (33%), Gaps = 5/89 (5%)
Frame = -1
Query: 556 PXXGFFXGPPFLXXPPXXXGVXPPXP--GXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPP 383
P GF P PP G+ PP P G G P +F P + PP PP
Sbjct: 312 PKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPP 371
Query: 382 ---FPQKVRGXGXXPKXSXXXXPPPPIXP 305
+P P PPPP P
Sbjct: 372 AADYPTLPPPPLSQPTGGAPPPPPPPPPP 400
>AL096774-6|CAC18518.1| 498|Homo sapiens WAS protein family, member
2 protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.56
Identities = 26/89 (29%), Positives = 30/89 (33%), Gaps = 5/89 (5%)
Frame = -1
Query: 556 PXXGFFXGPPFLXXPPXXXGVXPPXP--GXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPP 383
P GF P PP G+ PP P G G P +F P + PP PP
Sbjct: 312 PKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPP 371
Query: 382 ---FPQKVRGXGXXPKXSXXXXPPPPIXP 305
+P P PPPP P
Sbjct: 372 AADYPTLPPPPLSQPTGGAPPPPPPPPPP 400
>AB026542-1|BAA81795.1| 498|Homo sapiens WASP-family protein
protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.56
Identities = 26/89 (29%), Positives = 30/89 (33%), Gaps = 5/89 (5%)
Frame = -1
Query: 556 PXXGFFXGPPFLXXPPXXXGVXPPXP--GXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPP 383
P GF P PP G+ PP P G G P +F P + PP PP
Sbjct: 312 PKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPP 371
Query: 382 ---FPQKVRGXGXXPKXSXXXXPPPPIXP 305
+P P PPPP P
Sbjct: 372 AADYPTLPPPPLSQPTGGAPPPPPPPPPP 400
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 33.1 bits (72), Expect = 1.7
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = -1
Query: 514 PPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXPKXSX 335
PP G PP P G P G P + P PP P P
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPN 340
Query: 334 XXXPPPP 314
PPPP
Sbjct: 341 RMYPPPP 347
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 33.1 bits (72), Expect = 1.7
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = -1
Query: 514 PPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXPKXSX 335
PP G PP P G P G P + P PP P P
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPN 340
Query: 334 XXXPPPP 314
PPPP
Sbjct: 341 RMYPPPP 347
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 33.1 bits (72), Expect = 1.7
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = -1
Query: 514 PPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXPKXSX 335
PP G PP P G P G P + P PP P P
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPN 340
Query: 334 XXXPPPP 314
PPPP
Sbjct: 341 RMYPPPP 347
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 32.3 bits (70), Expect = 3.0
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = -1
Query: 514 PPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXPKXSX 335
PP G PP P G P G P + P PP P P
Sbjct: 281 PPSRGGPPPPPPPPHSSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVEVPPPPPN 340
Query: 334 XXXPPPP 314
PPPP
Sbjct: 341 RMYPPPP 347
>AJ509090-1|CAD48858.1| 625|Homo sapiens Wiskott-Aldrich syndrome
protein family member 4 protein.
Length = 625
Score = 31.5 bits (68), Expect = 5.2
Identities = 27/91 (29%), Positives = 31/91 (34%), Gaps = 13/91 (14%)
Frame = -1
Query: 547 GFFXGPPFLXXPPXXXGVXPPXP--GXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPP--- 383
GF P PP G+ PP P G G P +F P + PP PP
Sbjct: 443 GFAPPPAPPPPPPPMIGIPPPPPPIGFGSPGTPPPPSSPSFPPHPDFAAPPPLPPPPAAD 502
Query: 382 FP--------QKVRGXGXXPKXSXXXXPPPP 314
+P Q RG P PPPP
Sbjct: 503 YPTLPPPPLSQPTRGAPPPPPPPPPGPPPPP 533
>AF134304-1|AAD33053.2| 496|Homo sapiens Scar2 protein.
Length = 496
Score = 31.5 bits (68), Expect = 5.2
Identities = 27/91 (29%), Positives = 31/91 (34%), Gaps = 13/91 (14%)
Frame = -1
Query: 547 GFFXGPPFLXXPPXXXGVXPPXP--GXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPP--- 383
GF P PP G+ PP P G G P +F P + PP PP
Sbjct: 314 GFAPPPAPPPPPPPMIGIPPPPPPIGFGSPGTPPPPSSPSFPPHPDFAAPPPLPPPPAAD 373
Query: 382 FP--------QKVRGXGXXPKXSXXXXPPPP 314
+P Q RG P PPPP
Sbjct: 374 YPTLPPPPLSQPTRGAPPPPPPPPPGPPPPP 404
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 31.1 bits (67), Expect = 6.8
Identities = 27/83 (32%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Frame = -1
Query: 556 PXXGFFXGPPFLXXPPXXXGV--XPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPP 383
P GPP L PP G+ PP P G + P N P PP PP
Sbjct: 35 PPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFG--RPPFDPNMPPMPPPGGIPPPMGPP 92
Query: 382 FPQKVRGXGXXPKXSXXXXPPPP 314
Q R P S PPPP
Sbjct: 93 HLQ--RPPFMPPPMS--SMPPPP 111
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 31.1 bits (67), Expect = 6.8
Identities = 25/82 (30%), Positives = 27/82 (32%), Gaps = 3/82 (3%)
Frame = -1
Query: 556 PXXGFFXGPPFLXXPPXXXGVXP-PXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPP- 383
P G PP PP P P PG K G P G PG K P P
Sbjct: 170 PSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKM-PGGPKPGGGPGLSTPG 228
Query: 382 -FPQKVRGXGXXPKXSXXXXPP 320
P+ R G P+ PP
Sbjct: 229 GHPKPPRRGGGEPRGGRQHHPP 250
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 31.1 bits (67), Expect = 6.8
Identities = 27/83 (32%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Frame = -1
Query: 556 PXXGFFXGPPFLXXPPXXXGV--XPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPP 383
P GPP L PP G+ PP P G + P N P PP PP
Sbjct: 35 PPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFG--RPPFDPNMPPMPPPGGIPPPMGPP 92
Query: 382 FPQKVRGXGXXPKXSXXXXPPPP 314
Q R P S PPPP
Sbjct: 93 HLQ--RPPFMPPPMS--SMPPPP 111
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 31.1 bits (67), Expect = 6.8
Identities = 27/83 (32%), Positives = 29/83 (34%), Gaps = 2/83 (2%)
Frame = -1
Query: 556 PXXGFFXGPPFLXXPPXXXGV--XPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPP 383
P GPP L PP G+ PP P G + P N P PP PP
Sbjct: 39 PPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFG--RPPFDPNMPPMPPPGGIPPPMGPP 96
Query: 382 FPQKVRGXGXXPKXSXXXXPPPP 314
Q R P S PPPP
Sbjct: 97 HLQ--RPPFMPPPMS--SMPPPP 115
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,998,098
Number of Sequences: 237096
Number of extensions: 1628451
Number of successful extensions: 7994
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6910
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13931398152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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