BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_I21 (1033 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.14 U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.14 AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.58 AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.58 U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.77 U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.77 AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.77 AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 31 1.0 AL117203-6|CAB60419.1| 234|Caenorhabditis elegans Hypothetical ... 31 1.0 Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.1 AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.1 U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.4 U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 5.4 AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.4 AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.4 AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.4 Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 9.4 Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 9.4 >Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein C08B11.5 protein. Length = 388 Score = 34.3 bits (75), Expect = 0.14 Identities = 25/75 (33%), Positives = 28/75 (37%), Gaps = 2/75 (2%) Frame = -1 Query: 532 PPFLXXPPXXXGV-XPPXPGXKXLGGXKXPXXGNF-XPGFNKXKXPPXXXPPFPQKVRGX 359 PP PP G+ PP PG + GG P + G PP PP P G Sbjct: 321 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS--GH 378 Query: 358 GXXPKXSXXXXPPPP 314 G P PPPP Sbjct: 379 GMIP------PPPPP 387 >U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding protein protein. Length = 398 Score = 34.3 bits (75), Expect = 0.14 Identities = 25/75 (33%), Positives = 28/75 (37%), Gaps = 2/75 (2%) Frame = -1 Query: 532 PPFLXXPPXXXGV-XPPXPGXKXLGGXKXPXXGNF-XPGFNKXKXPPXXXPPFPQKVRGX 359 PP PP G+ PP PG + GG P + G PP PP P G Sbjct: 331 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS--GH 388 Query: 358 GXXPKXSXXXXPPPP 314 G P PPPP Sbjct: 389 GMIP------PPPPP 397 >AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical protein R148.5b protein. Length = 505 Score = 32.3 bits (70), Expect = 0.58 Identities = 23/73 (31%), Positives = 24/73 (32%) Frame = -1 Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGX 353 PPF PP G PP P +G P P F PP P RG Sbjct: 291 PPFGFFPPPPRGHFPPPP-PHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPY 349 Query: 352 XPKXSXXXXPPPP 314 P PPPP Sbjct: 350 PP----FFPPPPP 358 >AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical protein R148.5a protein. Length = 528 Score = 32.3 bits (70), Expect = 0.58 Identities = 23/73 (31%), Positives = 24/73 (32%) Frame = -1 Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGX 353 PPF PP G PP P +G P P F PP P RG Sbjct: 291 PPFGFFPPPPRGHFPPPP-PHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPY 349 Query: 352 XPKXSXXXXPPPP 314 P PPPP Sbjct: 350 PP----FFPPPPP 358 >U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect protein 1, isoformb protein. Length = 1437 Score = 31.9 bits (69), Expect = 0.77 Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 1/77 (1%) Frame = -1 Query: 514 PPXXXGVXPPXPGXKXL-GGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXPKXS 338 PP G PP PG + GG P P PP P + G P Sbjct: 707 PPITGG-PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPP 764 Query: 337 XXXXPPPPIXPVXXGXK 287 PPPP P G K Sbjct: 765 PGGCPPPPPPPPPGGFK 781 Score = 29.1 bits (62), Expect = 5.4 Identities = 22/76 (28%), Positives = 24/76 (31%) Frame = -1 Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGX 353 PP PP G PP P GG G P PP PP P +G Sbjct: 730 PPPGGLPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785 Query: 352 XPKXSXXXXPPPPIXP 305 P P P+ P Sbjct: 786 PPPPPGMFAPMAPVIP 801 Score = 24.6 bits (51), Expect(2) = 2.6 Identities = 10/21 (47%), Positives = 10/21 (47%) Frame = -3 Query: 515 PPPXXGGXXPPXGXXNXGGXK 453 PPP GG PP GG K Sbjct: 761 PPPPPGGCPPPPPPPPPGGFK 781 Score = 23.8 bits (49), Expect(2) = 2.6 Identities = 9/22 (40%), Positives = 9/22 (40%) Frame = -3 Query: 701 PPPPPPXXXXXXFFXKXXXPPP 636 PPPPPP PPP Sbjct: 742 PPPPPPPGGLPPISGGPPPPPP 763 >U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect protein 1, isoforma protein. Length = 1435 Score = 31.9 bits (69), Expect = 0.77 Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 1/77 (1%) Frame = -1 Query: 514 PPXXXGVXPPXPGXKXL-GGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXPKXS 338 PP G PP PG + GG P P PP P + G P Sbjct: 707 PPITGG-PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPP 764 Query: 337 XXXXPPPPIXPVXXGXK 287 PPPP P G K Sbjct: 765 PGGCPPPPPPPPPGGFK 781 Score = 29.1 bits (62), Expect = 5.4 Identities = 22/76 (28%), Positives = 24/76 (31%) Frame = -1 Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGX 353 PP PP G PP P GG G P PP PP P +G Sbjct: 730 PPPGGLPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785 Query: 352 XPKXSXXXXPPPPIXP 305 P P P+ P Sbjct: 786 PPPPPGMFAPMAPVIP 801 Score = 24.6 bits (51), Expect(2) = 2.6 Identities = 10/21 (47%), Positives = 10/21 (47%) Frame = -3 Query: 515 PPPXXGGXXPPXGXXNXGGXK 453 PPP GG PP GG K Sbjct: 761 PPPPPGGCPPPPPPPPPGGFK 781 Score = 23.8 bits (49), Expect(2) = 2.6 Identities = 9/22 (40%), Positives = 9/22 (40%) Frame = -3 Query: 701 PPPPPPXXXXXXFFXKXXXPPP 636 PPPPPP PPP Sbjct: 742 PPPPPPPGGLPPISGGPPPPPP 763 >AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. Length = 1018 Score = 31.9 bits (69), Expect = 0.77 Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 1/77 (1%) Frame = -1 Query: 514 PPXXXGVXPPXPGXKXL-GGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXPKXS 338 PP G PP PG + GG P P PP P + G P Sbjct: 290 PPITGG-PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPP 347 Query: 337 XXXXPPPPIXPVXXGXK 287 PPPP P G K Sbjct: 348 PGGCPPPPPPPPPGGFK 364 Score = 29.1 bits (62), Expect = 5.4 Identities = 22/76 (28%), Positives = 24/76 (31%) Frame = -1 Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGX 353 PP PP G PP P GG G P PP PP P +G Sbjct: 313 PPPGGLPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368 Query: 352 XPKXSXXXXPPPPIXP 305 P P P+ P Sbjct: 369 PPPPPGMFAPMAPVIP 384 Score = 24.6 bits (51), Expect(2) = 2.7 Identities = 10/21 (47%), Positives = 10/21 (47%) Frame = -3 Query: 515 PPPXXGGXXPPXGXXNXGGXK 453 PPP GG PP GG K Sbjct: 344 PPPPPGGCPPPPPPPPPGGFK 364 Score = 23.8 bits (49), Expect(2) = 2.7 Identities = 9/22 (40%), Positives = 9/22 (40%) Frame = -3 Query: 701 PPPPPPXXXXXXFFXKXXXPPP 636 PPPPPP PPP Sbjct: 325 PPPPPPPGGLPPISGGPPPPPP 346 >AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical protein Y53H1A.1 protein. Length = 613 Score = 31.5 bits (68), Expect = 1.0 Identities = 23/77 (29%), Positives = 27/77 (35%), Gaps = 3/77 (3%) Frame = -1 Query: 535 GPPFLXXPPXXXGVXPPXP-GXKXLGGXKXPXX-GNFXPGFNKXKXPPXXXPPFPQKVRG 362 GPP G PP P G G P G+F P + + PP PP P + Sbjct: 86 GPPVYHNQGPPRGYPPPPPQGADTWRGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHF 145 Query: 361 XG-XXPKXSXXXXPPPP 314 G P P PP Sbjct: 146 PGPPGPHRPPEHYPGPP 162 >AL117203-6|CAB60419.1| 234|Caenorhabditis elegans Hypothetical protein Y48C3A.9 protein. Length = 234 Score = 31.5 bits (68), Expect = 1.0 Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 7/73 (9%) Frame = -1 Query: 514 PPXXXG-VXPPXPGXKXLGGXKXPXXGNFXPG------FNKXKXPPXXXPPFPQKVRGXG 356 PP G PP G + +GG G F PG PP P FP R Sbjct: 110 PPGMNGHFAPPPMGMEMMGGHPGAFGGRFAPGRMPPGAMAPGGMPPGAFPMFPPDPRLQR 169 Query: 355 XXPKXSXXXXPPP 317 P PPP Sbjct: 170 MAPNQGMRMPPPP 182 >Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein T24B8.4 protein. Length = 866 Score = 29.5 bits (63), Expect = 4.1 Identities = 24/82 (29%), Positives = 26/82 (31%), Gaps = 5/82 (6%) Frame = -1 Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXP-----GFNKXKXPPXXXPPFPQKV 368 P F PP G PP PG + G P G P PP P Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120 Query: 367 RGXGXXPKXSXXXXPPPPIXPV 302 G G P+ PP P PV Sbjct: 121 SGLGVAPQ------PPRPKTPV 136 >AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical protein D1007.7 protein. Length = 988 Score = 29.5 bits (63), Expect = 4.1 Identities = 21/71 (29%), Positives = 25/71 (35%) Frame = -1 Query: 523 LXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXPK 344 L P G+ P P L P PG+ PP PP PQ + G P Sbjct: 685 LPGQPRPAGLPPGVPPMFNLNAPPPPGI----PGYPPAPPPPGVGPPPPQGIPPMGFDPN 740 Query: 343 XSXXXXPPPPI 311 PPPP+ Sbjct: 741 -----KPPPPM 746 >U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cytoskeleton modulator)homolog protein 1, isoform b protein. Length = 781 Score = 29.1 bits (62), Expect = 5.4 Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 2/65 (3%) Frame = -1 Query: 490 PPXPGXKXLGGXKX-PXXGNFXPGFNKXKX-PPXXXPPFPQKVRGXGXXPKXSXXXXPPP 317 PP G + + + P N+ N+ PP PP PQ G P S PPP Sbjct: 578 PPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSF---GMAPISSAAPPPPP 634 Query: 316 PIXPV 302 P P+ Sbjct: 635 PPPPM 639 >U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cytoskeleton modulator)homolog protein 1, isoform a protein. Length = 607 Score = 29.1 bits (62), Expect = 5.4 Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 2/65 (3%) Frame = -1 Query: 490 PPXPGXKXLGGXKX-PXXGNFXPGFNKXKX-PPXXXPPFPQKVRGXGXXPKXSXXXXPPP 317 PP G + + + P N+ N+ PP PP PQ G P S PPP Sbjct: 404 PPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSF---GMAPISSAAPPPPP 460 Query: 316 PIXPV 302 P P+ Sbjct: 461 PPPPM 465 >AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform b protein. Length = 518 Score = 29.1 bits (62), Expect = 5.4 Identities = 24/85 (28%), Positives = 28/85 (32%) Frame = -1 Query: 568 KKKTPXXGFFXGPPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXX 389 K++ P G PP P G P P G P G+ P PP Sbjct: 228 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPP-PPAAGSPPPPRTGSPPP-------PPTGS 279 Query: 388 PPFPQKVRGXGXXPKXSXXXXPPPP 314 PP P G P+ PPPP Sbjct: 280 PP-PPPAGGSPPPPRAGSPPPPPPP 303 >AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform c protein. Length = 539 Score = 29.1 bits (62), Expect = 5.4 Identities = 24/85 (28%), Positives = 28/85 (32%) Frame = -1 Query: 568 KKKTPXXGFFXGPPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXX 389 K++ P G PP P G P P G P G+ P PP Sbjct: 249 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPP-PPAAGSPPPPRTGSPPP-------PPTGS 300 Query: 388 PPFPQKVRGXGXXPKXSXXXXPPPP 314 PP P G P+ PPPP Sbjct: 301 PP-PPPAGGSPPPPRAGSPPPPPPP 324 >AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform a protein. Length = 524 Score = 29.1 bits (62), Expect = 5.4 Identities = 24/85 (28%), Positives = 28/85 (32%) Frame = -1 Query: 568 KKKTPXXGFFXGPPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXX 389 K++ P G PP P G P P G P G+ P PP Sbjct: 234 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPP-PPAAGSPPPPRTGSPPP-------PPTGS 285 Query: 388 PPFPQKVRGXGXXPKXSXXXXPPPP 314 PP P G P+ PPPP Sbjct: 286 PP-PPPAGGSPPPPRAGSPPPPPPP 309 >Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein C33B4.3b protein. Length = 993 Score = 28.3 bits (60), Expect = 9.4 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%) Frame = -1 Query: 403 PPXXXPPF--PQKVRGXGXXPKXSXXXXPPPPIXPVXXG 293 PP PP P V P S PPPP+ P+ G Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSG 806 >Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein C33B4.3a protein. Length = 1110 Score = 28.3 bits (60), Expect = 9.4 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%) Frame = -1 Query: 403 PPXXXPPF--PQKVRGXGXXPKXSXXXXPPPPIXPVXXG 293 PP PP P V P S PPPP+ P+ G Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSG 806 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,630,861 Number of Sequences: 27780 Number of extensions: 201850 Number of successful extensions: 1186 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 480 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1002 length of database: 12,740,198 effective HSP length: 82 effective length of database: 10,462,238 effective search space used: 2730644118 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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