Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_I21
(1033 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.14
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.14
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.58
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.58
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.77
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.77
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.77
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 31 1.0
AL117203-6|CAB60419.1| 234|Caenorhabditis elegans Hypothetical ... 31 1.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 5.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.4
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 9.4
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.14
Identities = 25/75 (33%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Frame = -1
Query: 532 PPFLXXPPXXXGV-XPPXPGXKXLGGXKXPXXGNF-XPGFNKXKXPPXXXPPFPQKVRGX 359
PP PP G+ PP PG + GG P + G PP PP P G
Sbjct: 321 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS--GH 378
Query: 358 GXXPKXSXXXXPPPP 314
G P PPPP
Sbjct: 379 GMIP------PPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.14
Identities = 25/75 (33%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Frame = -1
Query: 532 PPFLXXPPXXXGV-XPPXPGXKXLGGXKXPXXGNF-XPGFNKXKXPPXXXPPFPQKVRGX 359
PP PP G+ PP PG + GG P + G PP PP P G
Sbjct: 331 PPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS--GH 388
Query: 358 GXXPKXSXXXXPPPP 314
G P PPPP
Sbjct: 389 GMIP------PPPPP 397
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 32.3 bits (70), Expect = 0.58
Identities = 23/73 (31%), Positives = 24/73 (32%)
Frame = -1
Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGX 353
PPF PP G PP P +G P P F PP P RG
Sbjct: 291 PPFGFFPPPPRGHFPPPP-PHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPY 349
Query: 352 XPKXSXXXXPPPP 314
P PPPP
Sbjct: 350 PP----FFPPPPP 358
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 32.3 bits (70), Expect = 0.58
Identities = 23/73 (31%), Positives = 24/73 (32%)
Frame = -1
Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGX 353
PPF PP G PP P +G P P F PP P RG
Sbjct: 291 PPFGFFPPPPRGHFPPPP-PHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPY 349
Query: 352 XPKXSXXXXPPPP 314
P PPPP
Sbjct: 350 PP----FFPPPPP 358
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.77
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Frame = -1
Query: 514 PPXXXGVXPPXPGXKXL-GGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXPKXS 338
PP G PP PG + GG P P PP P + G P
Sbjct: 707 PPITGG-PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPP 764
Query: 337 XXXXPPPPIXPVXXGXK 287
PPPP P G K
Sbjct: 765 PGGCPPPPPPPPPGGFK 781
Score = 29.1 bits (62), Expect = 5.4
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = -1
Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGX 353
PP PP G PP P GG G P PP PP P +G
Sbjct: 730 PPPGGLPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 352 XPKXSXXXXPPPPIXP 305
P P P+ P
Sbjct: 786 PPPPPGMFAPMAPVIP 801
Score = 24.6 bits (51), Expect(2) = 2.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 515 PPPXXGGXXPPXGXXNXGGXK 453
PPP GG PP GG K
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFK 781
Score = 23.8 bits (49), Expect(2) = 2.6
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -3
Query: 701 PPPPPPXXXXXXFFXKXXXPPP 636
PPPPPP PPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPP 763
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.77
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Frame = -1
Query: 514 PPXXXGVXPPXPGXKXL-GGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXPKXS 338
PP G PP PG + GG P P PP P + G P
Sbjct: 707 PPITGG-PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPP 764
Query: 337 XXXXPPPPIXPVXXGXK 287
PPPP P G K
Sbjct: 765 PGGCPPPPPPPPPGGFK 781
Score = 29.1 bits (62), Expect = 5.4
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = -1
Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGX 353
PP PP G PP P GG G P PP PP P +G
Sbjct: 730 PPPGGLPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 352 XPKXSXXXXPPPPIXP 305
P P P+ P
Sbjct: 786 PPPPPGMFAPMAPVIP 801
Score = 24.6 bits (51), Expect(2) = 2.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 515 PPPXXGGXXPPXGXXNXGGXK 453
PPP GG PP GG K
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFK 781
Score = 23.8 bits (49), Expect(2) = 2.6
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -3
Query: 701 PPPPPPXXXXXXFFXKXXXPPP 636
PPPPPP PPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPP 763
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.77
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Frame = -1
Query: 514 PPXXXGVXPPXPGXKXL-GGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXPKXS 338
PP G PP PG + GG P P PP P + G P
Sbjct: 290 PPITGG-PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPP 347
Query: 337 XXXXPPPPIXPVXXGXK 287
PPPP P G K
Sbjct: 348 PGGCPPPPPPPPPGGFK 364
Score = 29.1 bits (62), Expect = 5.4
Identities = 22/76 (28%), Positives = 24/76 (31%)
Frame = -1
Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGX 353
PP PP G PP P GG G P PP PP P +G
Sbjct: 313 PPPGGLPPITGGPPPPPPP----GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 352 XPKXSXXXXPPPPIXP 305
P P P+ P
Sbjct: 369 PPPPPGMFAPMAPVIP 384
Score = 24.6 bits (51), Expect(2) = 2.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 515 PPPXXGGXXPPXGXXNXGGXK 453
PPP GG PP GG K
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFK 364
Score = 23.8 bits (49), Expect(2) = 2.7
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -3
Query: 701 PPPPPPXXXXXXFFXKXXXPPP 636
PPPPPP PPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPP 346
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 31.5 bits (68), Expect = 1.0
Identities = 23/77 (29%), Positives = 27/77 (35%), Gaps = 3/77 (3%)
Frame = -1
Query: 535 GPPFLXXPPXXXGVXPPXP-GXKXLGGXKXPXX-GNFXPGFNKXKXPPXXXPPFPQKVRG 362
GPP G PP P G G P G+F P + + PP PP P +
Sbjct: 86 GPPVYHNQGPPRGYPPPPPQGADTWRGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHF 145
Query: 361 XG-XXPKXSXXXXPPPP 314
G P P PP
Sbjct: 146 PGPPGPHRPPEHYPGPP 162
>AL117203-6|CAB60419.1| 234|Caenorhabditis elegans Hypothetical
protein Y48C3A.9 protein.
Length = 234
Score = 31.5 bits (68), Expect = 1.0
Identities = 22/73 (30%), Positives = 24/73 (32%), Gaps = 7/73 (9%)
Frame = -1
Query: 514 PPXXXG-VXPPXPGXKXLGGXKXPXXGNFXPG------FNKXKXPPXXXPPFPQKVRGXG 356
PP G PP G + +GG G F PG PP P FP R
Sbjct: 110 PPGMNGHFAPPPMGMEMMGGHPGAFGGRFAPGRMPPGAMAPGGMPPGAFPMFPPDPRLQR 169
Query: 355 XXPKXSXXXXPPP 317
P PPP
Sbjct: 170 MAPNQGMRMPPPP 182
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 4.1
Identities = 24/82 (29%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Frame = -1
Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXP-----GFNKXKXPPXXXPPFPQKV 368
P F PP G PP PG + G P G P PP P
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Query: 367 RGXGXXPKXSXXXXPPPPIXPV 302
G G P+ PP P PV
Sbjct: 121 SGLGVAPQ------PPRPKTPV 136
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/71 (29%), Positives = 25/71 (35%)
Frame = -1
Query: 523 LXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXPK 344
L P G+ P P L P PG+ PP PP PQ + G P
Sbjct: 685 LPGQPRPAGLPPGVPPMFNLNAPPPPGI----PGYPPAPPPPGVGPPPPQGIPPMGFDPN 740
Query: 343 XSXXXXPPPPI 311
PPPP+
Sbjct: 741 -----KPPPPM 746
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = -1
Query: 490 PPXPGXKXLGGXKX-PXXGNFXPGFNKXKX-PPXXXPPFPQKVRGXGXXPKXSXXXXPPP 317
PP G + + + P N+ N+ PP PP PQ G P S PPP
Sbjct: 578 PPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSF---GMAPISSAAPPPPP 634
Query: 316 PIXPV 302
P P+
Sbjct: 635 PPPPM 639
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = -1
Query: 490 PPXPGXKXLGGXKX-PXXGNFXPGFNKXKX-PPXXXPPFPQKVRGXGXXPKXSXXXXPPP 317
PP G + + + P N+ N+ PP PP PQ G P S PPP
Sbjct: 404 PPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSF---GMAPISSAAPPPPP 460
Query: 316 PIXPV 302
P P+
Sbjct: 461 PPPPM 465
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 5.4
Identities = 24/85 (28%), Positives = 28/85 (32%)
Frame = -1
Query: 568 KKKTPXXGFFXGPPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXX 389
K++ P G PP P G P P G P G+ P PP
Sbjct: 228 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPP-PPAAGSPPPPRTGSPPP-------PPTGS 279
Query: 388 PPFPQKVRGXGXXPKXSXXXXPPPP 314
PP P G P+ PPPP
Sbjct: 280 PP-PPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 5.4
Identities = 24/85 (28%), Positives = 28/85 (32%)
Frame = -1
Query: 568 KKKTPXXGFFXGPPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXX 389
K++ P G PP P G P P G P G+ P PP
Sbjct: 249 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPP-PPAAGSPPPPRTGSPPP-------PPTGS 300
Query: 388 PPFPQKVRGXGXXPKXSXXXXPPPP 314
PP P G P+ PPPP
Sbjct: 301 PP-PPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 5.4
Identities = 24/85 (28%), Positives = 28/85 (32%)
Frame = -1
Query: 568 KKKTPXXGFFXGPPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXX 389
K++ P G PP P G P P G P G+ P PP
Sbjct: 234 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPP-PPAAGSPPPPRTGSPPP-------PPTGS 285
Query: 388 PPFPQKVRGXGXXPKXSXXXXPPPP 314
PP P G P+ PPPP
Sbjct: 286 PP-PPPAGGSPPPPRAGSPPPPPPP 309
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -1
Query: 403 PPXXXPPF--PQKVRGXGXXPKXSXXXXPPPPIXPVXXG 293
PP PP P V P S PPPP+ P+ G
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSG 806
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -1
Query: 403 PPXXXPPF--PQKVRGXGXXPKXSXXXXPPPPIXPVXXG 293
PP PP P V P S PPPP+ P+ G
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSG 806
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,630,861
Number of Sequences: 27780
Number of extensions: 201850
Number of successful extensions: 1186
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2730644118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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