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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I21
         (1033 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g31810.1 68414.m03904 formin homology 2 domain-containing pro...    33   0.23 
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t...    29   5.0  
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro...    25   5.4  
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex...    29   6.6  
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea...    29   6.6  
At1g61080.1 68414.m06877 proline-rich family protein                   29   6.6  
At1g67770.1 68414.m07733 RNA-binding protein, putative similar t...    28   8.8  

>At1g31810.1 68414.m03904 formin homology 2 domain-containing
           protein / FH2 domain-containing protein low similarity
           to SP|P48608 Diaphanous protein {Drosophila
           melanogaster}; contains Pfam profile PF02181: Formin
           Homology 2(FH2) Domain
          Length = 1201

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 21/74 (28%), Positives = 22/74 (29%)
 Frame = -1

Query: 535 GPPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXG 356
           GPP    PP      PP P        K P      P   +   PP   PP   K     
Sbjct: 675 GPPSTPPPPP-----PPPPKANISNAPKPPAPPPLPPSSTRLGAPPPPPPPPLSKTPAPP 729

Query: 355 XXPKXSXXXXPPPP 314
             P       PPPP
Sbjct: 730 PPPLSKTPVPPPPP 743


>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein similar to
           SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
           Lycopersicon esculentum, proline-rich cell wall protein
           [Medicago sativa] GI:3818416; contains Pfam profile
           PF00234 Protease inhibitor/seed storage/LTP family
          Length = 428

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 21/73 (28%), Positives = 22/73 (30%)
 Frame = -1

Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGX 353
           PP +  PP      PP P  K       P      P       PP   PP P  V     
Sbjct: 100 PPTVKPPPPPYVKPPPPPTVKP---PPPPTPYTPPPPTPYTPPPPTVKPPPPPVVTPPPP 156

Query: 352 XPKXSXXXXPPPP 314
            P       PPPP
Sbjct: 157 TPTPEAPCPPPPP 169


>At2g25050.1 68415.m02996 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02128
          Length = 1111

 Score = 24.6 bits (51), Expect(2) = 5.4
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = -3

Query: 701 PPPPPPXXXXXXFFXKXXXPPP 636
           PPPPPP             PPP
Sbjct: 604 PPPPPPLQSHRSALSSSPLPPP 625



 Score = 22.6 bits (46), Expect(2) = 5.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 707 RXPPPPPP 684
           R PPPPPP
Sbjct: 570 RPPPPPPP 577


>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 494

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 20/73 (27%), Positives = 23/73 (31%)
 Frame = -1

Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGX 353
           PP +  PP      PP P          P      P F+    PP   PP P  +     
Sbjct: 405 PPIVALPP------PPPPSPPLPPPVYSPPPS--PPVFSPPPSPPVYSPPPPPSIHYSSP 456

Query: 352 XPKXSXXXXPPPP 314
            P       PPPP
Sbjct: 457 PPPPVHHSSPPPP 469


>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
            family protein similar to CPY (GI:3096961) {Chironomus
            thummi}; contains Pfam PF00400: WD domain, G-beta repeat
            (8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
          Length = 2471

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +2

Query: 23   PHLXRGXFXLKNFDI-SXSPKXXRKXWSXIXKNVFXGVXVYPAC 151
            PHL    F L+NFDI   S     + WS + + V     +Y  C
Sbjct: 1959 PHLLHEAFLLENFDIFEWSKSKPLEDWSDMYREVIRKNELYVPC 2002


>At1g61080.1 68414.m06877 proline-rich family protein 
          Length = 907

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 22/77 (28%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
 Frame = -1

Query: 514 PPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXP---K 344
           PP    V PP P     G    P      PG  +   PP   PP   +       P    
Sbjct: 528 PPPRAAVAPPPPPPPP-GTAAAPPPPPPPPG-TQAAPPPPPPPPMQNRAPSPPPMPMGNS 585

Query: 343 XSXXXXPPPPIXPVXXG 293
            S    PPPP  P+  G
Sbjct: 586 GSGGPPPPPPPMPLANG 602


>At1g67770.1 68414.m07733 RNA-binding protein, putative similar to
           terminal ear1 gb|AAC39463.1
          Length = 527

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 701 PPPPPPXXXXXXFFXKXXXPPP 636
           PPPPPP      +F     PPP
Sbjct: 44  PPPPPPPPPPPLYFSYFSLPPP 65



 Score = 28.3 bits (60), Expect = 8.8
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 701 PPPPPPXXXXXXFFXKXXXPPP 636
           PPPPPP      +F     PPP
Sbjct: 47  PPPPPPPPLYFSYFSLPPPPPP 68


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,084,074
Number of Sequences: 28952
Number of extensions: 205925
Number of successful extensions: 1315
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,070,560
effective HSP length: 82
effective length of database: 9,696,496
effective search space used: 2530785456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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