BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_I21 (1033 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 33 0.23 At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 29 5.0 At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 25 5.4 At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 29 6.6 At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 29 6.6 At1g61080.1 68414.m06877 proline-rich family protein 29 6.6 At1g67770.1 68414.m07733 RNA-binding protein, putative similar t... 28 8.8 >At1g31810.1 68414.m03904 formin homology 2 domain-containing protein / FH2 domain-containing protein low similarity to SP|P48608 Diaphanous protein {Drosophila melanogaster}; contains Pfam profile PF02181: Formin Homology 2(FH2) Domain Length = 1201 Score = 33.5 bits (73), Expect = 0.23 Identities = 21/74 (28%), Positives = 22/74 (29%) Frame = -1 Query: 535 GPPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXG 356 GPP PP PP P K P P + PP PP K Sbjct: 675 GPPSTPPPPP-----PPPPKANISNAPKPPAPPPLPPSSTRLGAPPPPPPPPLSKTPAPP 729 Query: 355 XXPKXSXXXXPPPP 314 P PPPP Sbjct: 730 PPPLSKTPVPPPPP 743 >At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein similar to SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein Lycopersicon esculentum, proline-rich cell wall protein [Medicago sativa] GI:3818416; contains Pfam profile PF00234 Protease inhibitor/seed storage/LTP family Length = 428 Score = 29.1 bits (62), Expect = 5.0 Identities = 21/73 (28%), Positives = 22/73 (30%) Frame = -1 Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGX 353 PP + PP PP P K P P PP PP P V Sbjct: 100 PPTVKPPPPPYVKPPPPPTVKP---PPPPTPYTPPPPTPYTPPPPTVKPPPPPVVTPPPP 156 Query: 352 XPKXSXXXXPPPP 314 P PPPP Sbjct: 157 TPTPEAPCPPPPP 169 >At2g25050.1 68415.m02996 formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02128 Length = 1111 Score = 24.6 bits (51), Expect(2) = 5.4 Identities = 9/22 (40%), Positives = 9/22 (40%) Frame = -3 Query: 701 PPPPPPXXXXXXFFXKXXXPPP 636 PPPPPP PPP Sbjct: 604 PPPPPPLQSHRSALSSSPLPPP 625 Score = 22.6 bits (46), Expect(2) = 5.4 Identities = 7/8 (87%), Positives = 7/8 (87%) Frame = -3 Query: 707 RXPPPPPP 684 R PPPPPP Sbjct: 570 RPPPPPPP 577 >At3g24480.1 68416.m03070 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 494 Score = 28.7 bits (61), Expect = 6.6 Identities = 20/73 (27%), Positives = 23/73 (31%) Frame = -1 Query: 532 PPFLXXPPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGX 353 PP + PP PP P P P F+ PP PP P + Sbjct: 405 PPIVALPP------PPPPSPPLPPPVYSPPPS--PPVFSPPPSPPVYSPPPPPSIHYSSP 456 Query: 352 XPKXSXXXXPPPP 314 P PPPP Sbjct: 457 PPPPVHHSSPPPP 469 >At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat family protein similar to CPY (GI:3096961) {Chironomus thummi}; contains Pfam PF00400: WD domain, G-beta repeat (8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499 Length = 2471 Score = 28.7 bits (61), Expect = 6.6 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = +2 Query: 23 PHLXRGXFXLKNFDI-SXSPKXXRKXWSXIXKNVFXGVXVYPAC 151 PHL F L+NFDI S + WS + + V +Y C Sbjct: 1959 PHLLHEAFLLENFDIFEWSKSKPLEDWSDMYREVIRKNELYVPC 2002 >At1g61080.1 68414.m06877 proline-rich family protein Length = 907 Score = 28.7 bits (61), Expect = 6.6 Identities = 22/77 (28%), Positives = 25/77 (32%), Gaps = 3/77 (3%) Frame = -1 Query: 514 PPXXXGVXPPXPGXKXLGGXKXPXXGNFXPGFNKXKXPPXXXPPFPQKVRGXGXXP---K 344 PP V PP P G P PG + PP PP + P Sbjct: 528 PPPRAAVAPPPPPPPP-GTAAAPPPPPPPPG-TQAAPPPPPPPPMQNRAPSPPPMPMGNS 585 Query: 343 XSXXXXPPPPIXPVXXG 293 S PPPP P+ G Sbjct: 586 GSGGPPPPPPPMPLANG 602 >At1g67770.1 68414.m07733 RNA-binding protein, putative similar to terminal ear1 gb|AAC39463.1 Length = 527 Score = 28.3 bits (60), Expect = 8.8 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -3 Query: 701 PPPPPPXXXXXXFFXKXXXPPP 636 PPPPPP +F PPP Sbjct: 44 PPPPPPPPPPPLYFSYFSLPPP 65 Score = 28.3 bits (60), Expect = 8.8 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -3 Query: 701 PPPPPPXXXXXXFFXKXXXPPP 636 PPPPPP +F PPP Sbjct: 47 PPPPPPPPLYFSYFSLPPPPPP 68 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,084,074 Number of Sequences: 28952 Number of extensions: 205925 Number of successful extensions: 1315 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 431 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1125 length of database: 12,070,560 effective HSP length: 82 effective length of database: 9,696,496 effective search space used: 2530785456 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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