Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_I18
(1369 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 33 2.4
D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein. 32 4.2
BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich syndrom... 32 5.6
AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein. 32 5.6
AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens ... 32 5.6
AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein. 32 5.6
U41371-1|AAA97461.1| 872|Homo sapiens spliceosome associated pr... 31 9.7
BX537771-1|CAD97834.1| 799|Homo sapiens hypothetical protein pr... 31 9.7
BC053577-1|AAH53577.1| 877|Homo sapiens SF3B2 protein protein. 31 9.7
BC000401-1|AAH00401.2| 894|Homo sapiens SF3B2 protein protein. 31 9.7
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 33.1 bits (72), Expect = 2.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 814 PXPPXXASXXQSXSPPPPRXXPXLXPPXXAHTSPXRXPPSL 936
P PP PPPP P L PP A P PP L
Sbjct: 315 PAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPL 355
>D88460-1|BAA20128.1| 505|Homo sapiens N-WASP protein.
Length = 505
Score = 32.3 bits (70), Expect = 4.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 844 QSXSPPPPRXXPXLXPPXXAHTSPXRXPPSLGRG 945
Q+ PPPP PP H+S PP+ GRG
Sbjct: 275 QAPPPPPPSRGGPPPPPPPPHSSGPPPPPARGRG 308
>BC052955-1|AAH52955.1| 505|Homo sapiens Wiskott-Aldrich
syndrome-like protein.
Length = 505
Score = 31.9 bits (69), Expect = 5.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 844 QSXSPPPPRXXPXLXPPXXAHTSPXRXPPSLGRG 945
Q+ PPPP PP H S PP+ GRG
Sbjct: 275 QAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRG 308
>AM295156-1|CAL26602.1| 505|Homo sapiens WASL protein protein.
Length = 505
Score = 31.9 bits (69), Expect = 5.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 844 QSXSPPPPRXXPXLXPPXXAHTSPXRXPPSLGRG 945
Q+ PPPP PP H S PP+ GRG
Sbjct: 275 QAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRG 308
>AK025837-1|BAB15254.1| 616|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22184 fis, clone HRC00983. ).
Length = 616
Score = 31.9 bits (69), Expect = 5.6
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 814 PXPPXXASXXQSXSPPPPRXXPXLXPPXXAHTSPXRXPP 930
P PP S +PPP P PP SP PP
Sbjct: 200 PSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPP 238
>AC006333-1|AAQ96857.1| 505|Homo sapiens unknown protein.
Length = 505
Score = 31.9 bits (69), Expect = 5.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +1
Query: 844 QSXSPPPPRXXPXLXPPXXAHTSPXRXPPSLGRG 945
Q+ PPPP PP H S PP+ GRG
Sbjct: 275 QAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRG 308
>U41371-1|AAA97461.1| 872|Homo sapiens spliceosome associated
protein protein.
Length = 872
Score = 31.1 bits (67), Expect = 9.7
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +1
Query: 820 PPXXASXXQSXSPPPPRXXPXLXPPXXAHTSPXRXPPSLGRG 945
PP A PPPP P L PP P PP LG G
Sbjct: 58 PPMSAQLPGIPMPPPPLGLPPLQPP----PPPPPPPPGLGLG 95
>BX537771-1|CAD97834.1| 799|Homo sapiens hypothetical protein
protein.
Length = 799
Score = 31.1 bits (67), Expect = 9.7
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +1
Query: 820 PPXXASXXQSXSPPPPRXXPXLXPPXXAHTSPXRXPPSLGRG 945
PP A PPPP P L PP P PP LG G
Sbjct: 83 PPMSAQLPGIPMPPPPLGLPPLQPP----PPPPPPPPGLGLG 120
>BC053577-1|AAH53577.1| 877|Homo sapiens SF3B2 protein protein.
Length = 877
Score = 31.1 bits (67), Expect = 9.7
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +1
Query: 820 PPXXASXXQSXSPPPPRXXPXLXPPXXAHTSPXRXPPSLGRG 945
PP A PPPP P L PP P PP LG G
Sbjct: 81 PPMSAQLPGIPMPPPPLGLPPLQPP----PPPPPPPPGLGLG 118
>BC000401-1|AAH00401.2| 894|Homo sapiens SF3B2 protein protein.
Length = 894
Score = 31.1 bits (67), Expect = 9.7
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +1
Query: 820 PPXXASXXQSXSPPPPRXXPXLXPPXXAHTSPXRXPPSLGRG 945
PP A PPPP P L PP P PP LG G
Sbjct: 80 PPMSAQLPGIPMPPPPLGLPPLQPP----PPPPPPPPGLGLG 117
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,486,298
Number of Sequences: 237096
Number of extensions: 1018636
Number of successful extensions: 5692
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4771
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19840906508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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