Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I16
         (1005 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    45   0.003
UniRef50_Q3JLJ3 Cluster: Hydrolase, NUDIX family domain protein;...    36   1.6  
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0...    36   2.2  
UniRef50_A2YKD5 Cluster: Putative uncharacterized protein; n=2; ...    33   8.8  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 45.2 bits (102), Expect = 0.003
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +3

Query: 705 PWKXPSCPLLFRPCRLXNTCPPF 773
           P + PSC LLFRPCRL +TCPPF
Sbjct: 49  PLEAPSCALLFRPCRLPDTCPPF 71



 Score = 35.1 bits (77), Expect = 2.9
 Identities = 17/27 (62%), Positives = 17/27 (62%)
 Frame = +2

Query: 623 P*TSIXKIXPQXXGAXTRQDYKXTXRF 703
           P TSI KI  Q  G  TRQDYK T RF
Sbjct: 22  PLTSITKIDAQVRGGETRQDYKDTRRF 48


>UniRef50_Q3JLJ3 Cluster: Hydrolase, NUDIX family domain protein;
           n=1; Burkholderia pseudomallei 1710b|Rep: Hydrolase,
           NUDIX family domain protein - Burkholderia pseudomallei
           (strain 1710b)
          Length = 758

 Score = 35.9 bits (79), Expect = 1.6
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +1

Query: 700 FPPGXLPLALSCSD--PAAYXIPVRPFXPSGXRXPF 801
           +PP   P+A +C    PA Y +P+RPF PS    PF
Sbjct: 46  YPPCPSPVAFACRSLLPAHYPLPLRPFIPSHLLSPF 81


>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
           CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
           Citrobacter koseri ATCC BAA-895
          Length = 125

 Score = 35.5 bits (78), Expect = 2.2
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +1

Query: 715 LPLALSCSDPAAYXIPVRPFXPSG 786
           LPLALSCS+PA   IPV PF  +G
Sbjct: 42  LPLALSCSNPAVSRIPVPPFSLAG 65


>UniRef50_A2YKD5 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 97

 Score = 33.5 bits (73), Expect = 8.8
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +1

Query: 661 RCXNPTGL*XYQXFPPGXLPLALSCSDPAAYXIPVRPFXPS 783
           R   PTG   +  FP G LP A S   PA+   P  P  PS
Sbjct: 31  RSTGPTGKLCFCSFPAGALPPAASAGQPASDRQPATPLLPS 71


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,526,858
Number of Sequences: 1657284
Number of extensions: 8405589
Number of successful extensions: 14185
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14160
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 95122559191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)