Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I16
         (1005 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1201 - 11419851-11419913,11420090-11420311                       31   1.4  
05_03_0032 - 7582595-7582690,7582879-7583004,7583119-7583185,758...    30   2.5  
06_03_0828 + 25137782-25138312,25141349-25141588                       30   3.3  

>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = +1

Query: 661 RCXNPTGL*XYQXFPPGXLPLALSCSDPAAYXIPVRPFXPS 783
           R   PTG   +  FP G LP A     PA    P  P  PS
Sbjct: 30  RSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPATPLFPS 70


>05_03_0032 -
           7582595-7582690,7582879-7583004,7583119-7583185,
           7583268-7583470
          Length = 163

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 19/53 (35%), Positives = 20/53 (37%)
 Frame = -1

Query: 882 GFGXXRPRXGGGXTYTXSGXPNXVXYGEXXTXXGRGERADRYSVSGRVGTGEG 724
           G G   PR GGG     +   N   YG        GE    YS S   GT EG
Sbjct: 11  GAGDENPRGGGGENTMGTSGGNPRGYGGRGPRGCSGESPRGYSNSKPTGTVEG 63


>06_03_0828 + 25137782-25138312,25141349-25141588
          Length = 256

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 804 GEXXTXXGRGERADRYSVSGRVGTGEGKREXSRG 703
           GE     GR  R +   +  R+G GEG+R   RG
Sbjct: 57  GEAGRGRGRQRRQEGRQIRARLGEGEGRRRRGRG 90


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,535,236
Number of Sequences: 37544
Number of extensions: 258048
Number of successful extensions: 497
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2952114480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)