Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I15
         (1010 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0459 + 21005060-21005419                                         30   2.6  
05_01_0183 - 1289608-1289643,1289965-1290026,1290113-1290162,129...    29   5.9  

>06_03_0459 + 21005060-21005419
          Length = 119

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
 Frame = -2

Query: 457 GNGSGAGPVTGSTVQVRVRQ----SGGFRXKTIDRWFFRQSAPEPHXCGRGGTSHPATAD 290
           G G   G V+  + Q+R+RQ     GG+R +    W      P P   G GG     T +
Sbjct: 17  GGGCMGGDVSPPSSQIRLRQRRCRGGGYRREAEGAWAVASPLPPPRSSG-GGAQRTVTVE 75


>05_01_0183 -
           1289608-1289643,1289965-1290026,1290113-1290162,
           1290260-1290357,1290547-1290927,1291191-1291697,
           1291922-1291996,1292095-1292286,1292599-1292658
          Length = 486

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 371 NGLSPEASGLPYSNLHCRPRNWARAXTVPKTN 466
           +G +P   G+   +L CRP +   + +VPK N
Sbjct: 422 HGFAPTGKGISIGDLECRPYDCNASNSVPKCN 453


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,192,472
Number of Sequences: 37544
Number of extensions: 524008
Number of successful extensions: 1508
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2975543960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)