Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I13
         (1075 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17G68 Cluster: Formin 1,2/cappuccino; n=2; Culicidae|R...    36   2.4  
UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis thalian...    34   5.5  
UniRef50_Q8IRB3 Cluster: CG32241-PA; n=1; Drosophila melanogaste...    34   5.5  
UniRef50_Q9FF14 Cluster: Similarity to unknown protein; n=3; Ara...    34   7.2  
UniRef50_A0DM29 Cluster: Chromosome undetermined scaffold_56, wh...    34   7.2  
UniRef50_Q753L1 Cluster: AFR301Cp; n=1; Eremothecium gossypii|Re...    29   7.3  
UniRef50_Q61TJ4 Cluster: Putative uncharacterized protein CBG057...    30   8.3  
UniRef50_Q9XIE0 Cluster: F23H11.22 protein; n=1; Arabidopsis tha...    33   9.5  
UniRef50_UPI0000F2B52B Cluster: PREDICTED: similar to diaphanous...    29   9.7  

>UniRef50_Q17G68 Cluster: Formin 1,2/cappuccino; n=2; Culicidae|Rep:
           Formin 1,2/cappuccino - Aedes aegypti (Yellowfever
           mosquito)
          Length = 891

 Score = 35.5 bits (78), Expect = 2.4
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -3

Query: 530 TXPPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
           T PPP  P       PPPPPP+F     PP
Sbjct: 296 TPPPPPLPPPLPPPHPPPPPPMFKTAVAPP 325


>UniRef50_Q9FLQ7 Cluster: Gb|AAD23008.1; n=1; Arabidopsis
            thaliana|Rep: Gb|AAD23008.1 - Arabidopsis thaliana
            (Mouse-ear cress)
          Length = 1289

 Score = 34.3 bits (75), Expect = 5.5
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -3

Query: 524  PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
            PPP  P       PPPPPP+F     PP
Sbjct: 1050 PPPPPPPMHGGAPPPPPPPMFGGAQPPP 1077


>UniRef50_Q8IRB3 Cluster: CG32241-PA; n=1; Drosophila
           melanogaster|Rep: CG32241-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 440

 Score = 34.3 bits (75), Expect = 5.5
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -3

Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
           PPP  P KK    PPPPPP       PP
Sbjct: 167 PPPPPPTKKVVYTPPPPPPTKKVVYTPP 194



 Score = 34.3 bits (75), Expect = 5.5
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -3

Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
           PPP  P KK    PPPPPP       PP
Sbjct: 180 PPPPPPTKKVVYTPPPPPPTKKVVYTPP 207



 Score = 34.3 bits (75), Expect = 5.5
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -3

Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
           PPP  P KK    PPPPPP       PP
Sbjct: 280 PPPPPPTKKVVYTPPPPPPTKKVVYTPP 307


>UniRef50_Q9FF14 Cluster: Similarity to unknown protein; n=3;
           Arabidopsis thaliana|Rep: Similarity to unknown protein
           - Arabidopsis thaliana (Mouse-ear cress)
          Length = 464

 Score = 33.9 bits (74), Expect = 7.2
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -3

Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
           PPP  P  +    PPPPPPL      PP
Sbjct: 31  PPPPPPLMRRRAPPPPPPPLMRRRAPPP 58


>UniRef50_A0DM29 Cluster: Chromosome undetermined scaffold_56, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_56,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 964

 Score = 33.9 bits (74), Expect = 7.2
 Identities = 13/28 (46%), Positives = 14/28 (50%)
 Frame = -3

Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
           PPP  P  +    PPPPPPL      PP
Sbjct: 390 PPPPLPPSQSGNRPPPPPPLLTKTGNPP 417


>UniRef50_Q753L1 Cluster: AFR301Cp; n=1; Eremothecium gossypii|Rep:
            AFR301Cp - Ashbya gossypii (Yeast) (Eremothecium
            gossypii)
          Length = 1655

 Score = 28.7 bits (61), Expect(2) = 7.3
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 485  PPPPPPLFXXXXXPP 441
            PPPPPPLF     PP
Sbjct: 1119 PPPPPPLFDGHACPP 1133



 Score = 23.8 bits (49), Expect(2) = 7.3
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 4/24 (16%)
 Frame = -3

Query: 524  PPPXXPXK----KX*XXPPPPPPL 465
            PPP  P      K    PPPPPP+
Sbjct: 1065 PPPAPPVPDVLLKNVIVPPPPPPM 1088


>UniRef50_Q61TJ4 Cluster: Putative uncharacterized protein CBG05727;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG05727 - Caenorhabditis
           briggsae
          Length = 288

 Score = 29.9 bits (64), Expect(2) = 8.3
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -3

Query: 524 PPPXXPXKKX*XXPPPPPP 468
           PPP  P K     PPPPPP
Sbjct: 115 PPPPPPPKATGSPPPPPPP 133



 Score = 22.6 bits (46), Expect(2) = 8.3
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 485 PPPPPPLFXXXXXPP 441
           PPPPPP       PP
Sbjct: 150 PPPPPPRGTGTPPPP 164


>UniRef50_Q9XIE0 Cluster: F23H11.22 protein; n=1; Arabidopsis
           thaliana|Rep: F23H11.22 protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 929

 Score = 33.5 bits (73), Expect = 9.5
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -3

Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
           PPP  P KK    PPPPPP       PP
Sbjct: 395 PPPPPPPKKGPAAPPPPPPPGKKGAGPP 422


>UniRef50_UPI0000F2B52B Cluster: PREDICTED: similar to diaphanous 1;
           n=1; Monodelphis domestica|Rep: PREDICTED: similar to
           diaphanous 1 - Monodelphis domestica
          Length = 1186

 Score = 29.1 bits (62), Expect(2) = 9.7
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -3

Query: 533 NTXPPPXXPXKKX*XXPPPPPP 468
           N  PPP  P       PPPPPP
Sbjct: 594 NVPPPPPLPGSISIPPPPPPPP 615



 Score = 23.0 bits (47), Expect(2) = 9.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 485 PPPPPPLF 462
           PPPPPP F
Sbjct: 656 PPPPPPAF 663


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,545,186
Number of Sequences: 1657284
Number of extensions: 5986515
Number of successful extensions: 38010
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30082
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 103681480965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)