Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_I13
(1075 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.51
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 32 0.90
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 28 1.5
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.6
10_08_0931 - 21647562-21649037 25 3.3
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 30 3.6
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 30 3.6
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.8
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 29 6.3
08_02_1256 + 25645085-25645396 29 6.3
07_01_0080 + 587674-588510 29 6.3
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160... 29 6.3
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 29 8.4
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 25 8.4
12_02_0818 - 23427625-23429022 24 9.4
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.7 bits (71), Expect = 0.51
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P + PPPPPPL PP
Sbjct: 608 PPPILPNRSVPPPPPPPPPLPNHSVLPP 635
Score = 25.0 bits (52), Expect(2) = 5.2
Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 2/21 (9%)
Frame = -3
Query: 524 PPPXXPX--KKX*XXPPPPPP 468
PPP P K PPPPPP
Sbjct: 651 PPPPAPGIGNKFPAPPPPPPP 671
Score = 22.6 bits (46), Expect(2) = 5.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 485 PPPPPPL 465
PPPPPPL
Sbjct: 691 PPPPPPL 697
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 31.9 bits (69), Expect = 0.90
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PP P ++ PPPPPPL PP
Sbjct: 76 PPAPRPPRRHHRIPPPPPPLLPTPPPPP 103
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 27.9 bits (59), Expect(2) = 1.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPP 468
PPP P PPPPPP
Sbjct: 74 PPPQTPPSPPPPPPPPPPP 92
Score = 21.8 bits (44), Expect(2) = 1.5
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 485 PPPPPPL 465
PPPPPP+
Sbjct: 120 PPPPPPM 126
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P K PPPPPP PP
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPP 340
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPP 341
>10_08_0931 - 21647562-21649037
Length = 491
Score = 24.6 bits (51), Expect(2) = 3.3
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 485 PPPPPPLFXXXXXPP 441
PPPPPP PP
Sbjct: 276 PPPPPPFLVHGYHPP 290
Score = 23.8 bits (49), Expect(2) = 3.3
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 509 PXKKX*XXPPPPPPLF 462
P K PPPPPP F
Sbjct: 267 PYKSSPPAPPPPPPPF 282
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPP 468
PPP P K PPPPPP
Sbjct: 930 PPPPPPGKPGGPPPPPPPP 948
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPP 468
PPP P K PPPPPP
Sbjct: 929 PPPPPPPGKPGGPPPPPPP 947
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 360 PPPPPPPPPPPPRPPPPPPPIKKGAPPP 387
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPL 465
PPP P PPPPPPL
Sbjct: 1169 PPPPPPLSPSLPPPPPPPPL 1188
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 29.1 bits (62), Expect = 6.3
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 533 NTXPPPXXPXKKX*XXPPPPPP 468
++ PPP P + PPPPPP
Sbjct: 145 SSSPPPPPPQESTPPPPPPPPP 166
>08_02_1256 + 25645085-25645396
Length = 103
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 61 PPPPPPPPPLPSPPPPPPPQQQEEQSPP 88
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 93 PPPPPPPSSGSPPPPPPPPPPPPPPPPP 120
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 521 PPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PP P PPPPPPLF P
Sbjct: 104 PPPPPPPPPPPPPPPPPPLFTRRSHAP 130
Score = 28.7 bits (61), Expect = 8.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 92 PPPPPPPPSSGSPPPPPPPPPPPPPPPP 119
>02_04_0567 -
23914330-23914461,23915016-23915136,23915954-23916048,
23916131-23916301,23917291-23917380,23917636-23918139
Length = 370
Score = 29.1 bits (62), Expect = 6.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPL 465
PPP P PPPPPPL
Sbjct: 38 PPPPPPPPPPPPPPPPPPPL 57
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 536 KNTXPPPXXPXKKX*XXPPPPPP 468
+N PPP P ++ PPPPPP
Sbjct: 32 RNPTPPPPPPRRR---TPPPPPP 51
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 25.4 bits (53), Expect(2) = 8.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 521 PPXXPXKKX*XXPPPPPP 468
PP P + PPPPPP
Sbjct: 43 PPSTPQLRGEASPPPPPP 60
Score = 21.4 bits (43), Expect(2) = 8.4
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 485 PPPPPPL 465
PPPPPP+
Sbjct: 57 PPPPPPV 63
>12_02_0818 - 23427625-23429022
Length = 465
Score = 24.2 bits (50), Expect(2) = 9.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPP 468
PP P PPPPPP
Sbjct: 279 PPSHLPSADQNGEPPPPPP 297
Score = 22.6 bits (46), Expect(2) = 9.4
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 485 PPPPPPL 465
PPPPPPL
Sbjct: 293 PPPPPPL 299
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,593,024
Number of Sequences: 37544
Number of extensions: 296755
Number of successful extensions: 3240
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2708
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3199551704
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -