Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I13
         (1075 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr...    29   0.45 
AF101312-1|AAC69221.3|  813|Caenorhabditis elegans Hypothetical ...    24   4.8  
Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical pr...    28   10.0 
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    28   10.0 
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    28   10.0 
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    28   10.0 
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    28   10.0 
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    28   10.0 

>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
           protein F15B9.4 protein.
          Length = 1140

 Score = 28.7 bits (61), Expect(2) = 0.45
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 524 PPPXXPXKKX*XXPPPPPPL 465
           PPP  P       PPPPPPL
Sbjct: 538 PPPPPPVGMANGGPPPPPPL 557



 Score = 22.6 bits (46), Expect(2) = 0.45
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 485 PPPPPPLF 462
           PPPPPP F
Sbjct: 580 PPPPPPSF 587


>AF101312-1|AAC69221.3|  813|Caenorhabditis elegans Hypothetical
           protein F56E10.2 protein.
          Length = 813

 Score = 24.2 bits (50), Expect(2) = 4.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 521 PPXXPXKKX*XXPPPPPPL 465
           PP  P       PPPPPP+
Sbjct: 320 PPLLPPVCPPAPPPPPPPI 338



 Score = 23.4 bits (48), Expect(2) = 4.8
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = -3

Query: 485 PPPPPPLFXXXXXPP 441
           PPPPPP       PP
Sbjct: 331 PPPPPPPIGGLTSPP 345


>Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical
           protein C33B4.3b protein.
          Length = 993

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -3

Query: 524 PPPXXPXKKX*XXPPPPPP 468
           PPP  P       PPPPPP
Sbjct: 797 PPPLPPISSGAPPPPPPPP 815


>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
           protein C33B4.3a protein.
          Length = 1110

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -3

Query: 524 PPPXXPXKKX*XXPPPPPP 468
           PPP  P       PPPPPP
Sbjct: 797 PPPLPPISSGAPPPPPPPP 815


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
           PPP  P       PPPPPP       PP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPP 785


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
           PPP  P       PPPPPP       PP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGFKGGPP 785


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
           PPP  P       PPPPPP       PP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGFKGGPP 368


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 28.3 bits (60), Expect = 10.0
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -3

Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
           PPP  P       PPPPPP       PP
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPP 591


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,658,798
Number of Sequences: 27780
Number of extensions: 165366
Number of successful extensions: 1168
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2877115450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)