Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_I13
(1075 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 34 0.19
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 33 0.25
At1g61080.1 68414.m06877 proline-rich family protein 31 0.99
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 31 1.3
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 31 1.7
At1g24150.1 68414.m03047 formin homology 2 domain-containing pro... 31 1.7
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 30 2.3
At1g31310.1 68414.m03831 hydroxyproline-rich glycoprotein family... 30 2.3
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 30 3.0
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 4.0
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 25 4.3
At4g18570.1 68417.m02749 proline-rich family protein common fami... 29 5.3
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 29 7.0
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 29 7.0
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 29 7.0
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 29 7.0
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 28 9.2
At1g23040.1 68414.m02878 hydroxyproline-rich glycoprotein family... 28 9.2
At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family... 25 10.0
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 33.9 bits (74), Expect = 0.19
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P + PPPPPPL PP
Sbjct: 31 PPPPPPLMRRRAPPPPPPPLMRRRAPPP 58
Score = 31.5 bits (68), Expect = 0.99
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP ++ PPPPPPL PP
Sbjct: 18 PPPPLMRRRAPLPPPPPPPLMRRRAPPP 45
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 30 PPPPPPPLMRRRAPPPPPPPLMRRRAPP 57
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP ++ PPPPPPL PP
Sbjct: 45 PPPPPLMRRRAPPPPPPPPLPRPCSRPP 72
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 536 KNTXPPPXXPXKKX*XXPPPPPP 468
+ PPP P + PPPPPP
Sbjct: 40 RRAPPPPPPPLMRRRAPPPPPPP 62
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP ++ PPPPPP PP
Sbjct: 17 PPPPPLMRRRAPLPPPPPPPLMRRRAPP 44
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P KK PPPPPP PP
Sbjct: 395 PPPPPPPKKGPAAPPPPPPPGKKGAGPP 422
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 584 PPXXXXXXXXXXXKXXKNTXPPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PP K PPP P KK PPPPP PP
Sbjct: 389 PPSAAAPPPPPPPKKGPAAPPPPPPPGKKGAGPPPPPPMSKKGPPKPP 436
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 530 TXPPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
T PPP P PPPPPP PP
Sbjct: 382 TSPPPPPPPSAA-APPPPPPPKKGPAAPPP 410
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 31.5 bits (68), Expect = 0.99
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P + PPPPPP+ PP
Sbjct: 551 PPPPPPGTQAAPPPPPPPPMQNRAPSPP 578
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PP P K PPPPPPL PP
Sbjct: 497 PPAFKPLKGSAPPPPPPPPLPTTIAAPP 524
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P + PPPPPP PP
Sbjct: 524 PPPPPPPRAAVAPPPPPPPPGTAAAPPP 551
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P + PPPPPP PP
Sbjct: 523 PPPPPPPPRAAVAPPPPPPPPGTAAAPP 550
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 512 PPPPLPTTIAAPPPPPPPPRAAVAPPPP 539
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 525 PPPPPPRAAVAPPPPPPPPGTAAAPPPP 552
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 538 PPPPPPGTAAAPPPPPPPPGTQAAPPPP 565
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPL 465
PPP P PPPPPP+
Sbjct: 593 PPPPMPLANGATPPPPPPPM 612
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 510 PPPPPPLPTTIAAPPPPPPPPRAAVAPP 537
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 537 PPPPPPPGTAAAPPPPPPPPGTQAAPPP 564
Score = 27.1 bits (57), Expect(2) = 2.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPP 468
PPP P PPPPPP
Sbjct: 550 PPPPPPPGTQAAPPPPPPP 568
Score = 21.8 bits (44), Expect(2) = 2.0
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 485 PPPPPPL 465
PPPPPP+
Sbjct: 591 PPPPPPM 597
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP + PP
Sbjct: 388 PPPPPPPPPPPPPPPPPPPPYVYPSPPP 415
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 389 PPPPPPPPPPPPPPPPPPPYVYPSPPPP 416
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPP ++ PP
Sbjct: 390 PPPPPPPPPPPPPPPPPPYVYPSPPPPP 417
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 379 PPPPPPPPPPPPPPPPPPPPPPPPPPPP 406
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 380 PPPPPPPPPPPPPPPPPPPPPPPPPPPP 407
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 387 PPPPPPPPPPPPPPPPPPPPPYVYPSPP 414
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 400 PPPPPPPPYVYPSPPPPPPSPPPYVYPP 427
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPP-LFXXXXXPP 441
PPP P PPPPPP ++ PP
Sbjct: 413 PPPPPPSPPPYVYPPPPPPYVYPPPPSPP 441
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPP PP+F PP
Sbjct: 414 PPPSPPLPPPVYSPPPSPPVFSPPPSPP 441
>At1g24150.1 68414.m03047 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 725
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPP 468
PPP P K+ PPPPPP
Sbjct: 247 PPPPIPVKQSATPPPPPPP 265
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = -3
Query: 530 TXPPPXXPX-KKX*XXPPPPPPL 465
T PPP P K PPPPPPL
Sbjct: 258 TPPPPPPPKLKNNGPSPPPPPPL 280
>At5g07760.1 68418.m00888 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 853
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXP 444
PPP P ++ PPPPPP P
Sbjct: 42 PPPPPPMRRRAPLPPPPPPAMRRRVLP 68
Score = 29.9 bits (64), Expect = 3.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPP 468
PPP P ++ PPPPPP
Sbjct: 28 PPPPPPMRRRAPLPPPPPP 46
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP ++ PPPPPP+ PP
Sbjct: 29 PPPPPMRRRAPLPPPPPPPMRRRAPLPP 56
Score = 26.2 bits (55), Expect(2) = 2.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPL 465
PPP + PPPPPPL
Sbjct: 58 PPPAMRRRVLPRPPPPPPPL 77
Score = 22.2 bits (45), Expect(2) = 2.6
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 485 PPPPPPLFXXXXXPP 441
P PPPPL PP
Sbjct: 99 PLPPPPLIFVGAPPP 113
>At1g31310.1 68414.m03831 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 383
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLF 462
PPP P + PPPPPP F
Sbjct: 226 PPPSQPLPRPLLLPPPPPPSF 246
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 530 TXPPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
T PPP P PPPPPP PP
Sbjct: 424 TSPPPPSPPPPVYSPPPPPPPPPPVYSPPP 453
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
P P P PPPPPP++ PP
Sbjct: 429 PSPPPPVYSPPPPPPPPPPVYSPPPPPP 456
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPP++ PP
Sbjct: 498 PPPPPPPPPPPVYSPPPPPVYSSPPPPP 525
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP PPPPPP++ PP
Sbjct: 444 PPPPVYSPPPPPPPPPPPPVYSPPPPPP 471
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP PPPPPP++ PP
Sbjct: 475 PPPPVYSPPPPSPPPPPPPVYSPPPPPP 502
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 442 PPPPPPVYSPPPPPPPPPPPPVYSPPPP 469
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 457 PPPPPPVYSPPPPPPPPPPPPPVYSPPP 484
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP PP
Sbjct: 488 PPPPPPVYSPPPPPPPPPPPPVYSPPPP 515
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.5 bits (63), Expect = 4.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLF 462
PPP P PPPPPP F
Sbjct: 217 PPPKPPSPPRKPPPPPPPPAF 237
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 25.0 bits (52), Expect(2) = 4.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 521 PPXXPXKKX*XXPPPPPP 468
PP P + PPPPPP
Sbjct: 560 PPLKPLRILSRPPPPPPP 577
Score = 22.6 bits (46), Expect(2) = 4.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 485 PPPPPPL 465
PPPPPPL
Sbjct: 604 PPPPPPL 610
>At4g18570.1 68417.m02749 proline-rich family protein common family
members: At3g25690, At4g04980, At5g61090 [Arabidopsis
thaliana]
Length = 642
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -3
Query: 536 KNTXPPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
K+ PPP P PPPPP + PP
Sbjct: 307 KSIPPPPPPPPPPLLQQPPPPPSVSKAPPPPP 338
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPP LF PP
Sbjct: 1080 PPPSPPLPPSSLPPPPPAALFPPLPPPP 1107
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 536 KNTXPPPXXPXKKX*XXPPPPPP 468
K T PPP P K PPPPPP
Sbjct: 191 KKTPPPP--PYKYGRVYPPPPPP 211
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P PPPPPP++ PP
Sbjct: 518 PPPPPPVYS----PPPPPPVYSPPPPPP 541
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -3
Query: 584 PPXXXXXXXXXXXKXXKNTXPPPXXPXKKX*XXPPPPPP 468
PP K PPP P PPPPPP
Sbjct: 681 PPPPPPPPKANISNAPKPPAPPPLPPSSTRLGAPPPPPP 719
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PPP P K PPPPPL PP
Sbjct: 716 PPPPPPLSKT--PAPPPPPLSKTPVPPP 741
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPLF 462
PPP P PPPPPP++
Sbjct: 619 PPPPPPTYYAVQSPPPPPPVY 639
>At1g23040.1 68414.m02878 hydroxyproline-rich glycoprotein family
protein contains proline-rich domains,
INTERPRO:IPR000694
Length = 144
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 521 PPXXPXKKX*XXPPPPPPLFXXXXXPP 441
PP P K PPPPP F PP
Sbjct: 81 PPPPPKKVSSYCPPPPPANFLYITGPP 107
>At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family
protein Common family members: At5g26070, At5g19800,
At1g72790 [Arabidopsis thaliana]
Length = 575
Score = 25.0 bits (52), Expect(2) = 10.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 524 PPPXXPXKKX*XXPPPPPPL 465
PPP P PPPPPPL
Sbjct: 381 PPPSPPPPP----PPPPPPL 396
Score = 21.4 bits (43), Expect(2) = 10.0
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -3
Query: 485 PPPPPPLF 462
PPPPPP +
Sbjct: 424 PPPPPPRY 431
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,149,766
Number of Sequences: 28952
Number of extensions: 178170
Number of successful extensions: 2240
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 12,070,560
effective HSP length: 82
effective length of database: 9,696,496
effective search space used: 2666536400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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