Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I11
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_08_0028 + 27782072-27782171,27782427-27782620                       33   0.30 
11_08_0013 + 27629086-27629185,27629441-27629634                       33   0.30 
08_02_1156 - 24760332-24761530,24762757-24763648                       31   0.92 
05_07_0345 - 29417029-29417769                                         29   3.7  
03_02_0141 + 5867591-5867736,5867926-5868010,5868096-5868137,586...    29   4.9  
02_05_0902 + 32620668-32621209,32621847-32622258,32622471-326226...    29   4.9  
07_03_0512 - 18954515-18955972                                         29   6.5  
02_05_0929 - 32798477-32798679,32798833-32798917                       29   6.5  
01_06_1201 - 35380338-35380496,35381200-35381322,35381521-353820...    28   8.5  

>11_08_0028 + 27782072-27782171,27782427-27782620
          Length = 97

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +3

Query: 186 LRNCDFMACDQLCRELGFPSGACDGE---QCVCDNFLKT 293
           L NCD   C   C+  GF  G CDGE    C C +  +T
Sbjct: 45  LVNCDMNKCMSDCQIKGFNGGLCDGESNDHCCCTDEART 83


>11_08_0013 + 27629086-27629185,27629441-27629634
          Length = 97

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +3

Query: 186 LRNCDFMACDQLCRELGFPSGACDGE---QCVCDNFLKT 293
           L NCD   C   C+  GF  G CDGE    C C +  +T
Sbjct: 45  LVNCDMNKCMSDCQIKGFNGGLCDGESNDHCCCTDEART 83


>08_02_1156 - 24760332-24761530,24762757-24763648
          Length = 696

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +3

Query: 231 LGFPSGACDGEQCVCDNFLKTRG 299
           LG  S  CDG+Q VCD +L TRG
Sbjct: 652 LGTTSNRCDGDQIVCD-YLSTRG 673


>05_07_0345 - 29417029-29417769
          Length = 246

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 376 FGFSGGICVGGQCECGNIHRNADQNENQS 462
           F  + G+ +GG    GN ++N DQN+NQ+
Sbjct: 30  FRVNVGVGIGGGIGIGNQNQNQDQNQNQN 58


>03_02_0141 +
           5867591-5867736,5867926-5868010,5868096-5868137,
           5868255-5868423,5868792-5868844,5869022-5869240,
           5869507-5869553,5869732-5869786
          Length = 271

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 268 HCSPSHAPLGNPSSRQSWSQAIKSQLRN 185
           H +PS +P  +P+S + W  A +  LRN
Sbjct: 11  HAAPSSSPSPSPASLRQWRPAAQRNLRN 38


>02_05_0902 +
           32620668-32621209,32621847-32622258,32622471-32622675,
           32622712-32622806,32622945-32623557,32623652-32623820,
           32624392-32624749,32625226-32625336,32626207-32626561,
           32627262-32627484,32627837-32628058,32628628-32628781
          Length = 1152

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = +1

Query: 328 PQLDCTTSECDQLCRRFGFSGGICVGGQCECGNIHRNADQNENQSTLENCDMRECDXSCR 507
           P L  TTS   +L   F  +GG  +G   E G +  +    +++ + +N D++E      
Sbjct: 474 PPLHLTTSSKQRLFEHFWNNGGARIG---EDGALGWSRWLAKDEESRQNIDIQENTQETE 530

Query: 508 RIGFPGW 528
           R G+ GW
Sbjct: 531 RGGWSGW 537


>07_03_0512 - 18954515-18955972
          Length = 485

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 669 GXCVXGRCQXRXYXPXTNIXDLDEKPSSSXKIV 767
           G CV GR     Y P   + DL++KPSS+ + V
Sbjct: 235 GRCVPGRTAPPLY-PIGPVLDLEDKPSSNARCV 266


>02_05_0929 - 32798477-32798679,32798833-32798917
          Length = 95

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +1

Query: 340 CTTSECDQLCRRFGFSGGI--CVGGQCEC 420
           C + EC   C R  + GG+  C+G QC+C
Sbjct: 56  CDSGECATNCPR-QYKGGVGQCIGTQCKC 83


>01_06_1201 -
           35380338-35380496,35381200-35381322,35381521-35382066,
           35382285-35382392,35382695-35383225,35383614-35383743,
           35384225-35385081,35385303-35385408,35387119-35387230,
           35389255-35389347,35389723-35389771,35389859-35389897,
           35390671-35390757,35391613-35391873,35391957-35392166,
           35392413-35393507
          Length = 1501

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 578 YVVGYNVAXASSIDAHGXPGNPIRR 504
           Y  G++    S + A G PG+P+RR
Sbjct: 596 YYAGHSPGRTSHVSAEGDPGHPLRR 620


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,800,304
Number of Sequences: 37544
Number of extensions: 427350
Number of successful extensions: 1094
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)