Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I11
         (877 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   0.92 
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           25   0.92 
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    24   1.6  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    24   1.6  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    24   1.6  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              24   2.1  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   3.7  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   3.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   4.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   8.5  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 120  CTVHKTLTKHSIDSIC 73
            CT+H+T  K + D IC
Sbjct: 1687 CTIHRTQVKETDDKIC 1702


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 207 ACDQLCRELGFPSGACDGEQCVC 275
           AC   C  LG   G C+   C+C
Sbjct: 34  ACAANCHSLGKAGGHCEKGVCIC 56



 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 349 SECDQLCRRFGFSGGICVGGQCEC 420
           S C   C   G +GG C  G C C
Sbjct: 33  SACAANCHSLGKAGGHCEKGVCIC 56


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 207 ACDQLCRELGFPSGACDGEQCVC 275
           AC   C  LG   G C+   C+C
Sbjct: 59  ACAANCLSLGKAGGHCEKVGCIC 81


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 207 ACDQLCRELGFPSGACDGEQCVC 275
           AC   C  LG   G C+   C+C
Sbjct: 59  ACAANCLSLGKAGGHCEKGVCIC 81



 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 349 SECDQLCRRFGFSGGICVGGQCEC 420
           S C   C   G +GG C  G C C
Sbjct: 58  SACAANCLSLGKAGGHCEKGVCIC 81


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 452  SFWSAFLCIFPHSHCPPTQMPPE 384
            SF+S+FL     S C P Q P E
Sbjct: 957  SFYSSFLYKSSESSCNPDQKPTE 979


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 404 VDNANVEIYTEMRTKMKINLPSKIVICEN 490
           +DN  +   T  R K K  LP++ V C N
Sbjct: 17  LDNVTMPETTPRRKKNKKPLPTECVFCRN 45


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 156 GLNTNKTSIKLRNCDFMAC 212
           G   N TSI +  CD M C
Sbjct: 100 GRQCNDTSIGVDGCDLMCC 118


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 156 GLNTNKTSIKLRNCDFMAC 212
           G   N TSI +  CD M C
Sbjct: 101 GRQCNDTSIGVDGCDLMCC 119


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 419 HSHCPPTQMPPENPN 375
           ++ CPPT   P NPN
Sbjct: 210 YTACPPTLACPLNPN 224


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 252 CDGEQCVCDNFLKTRGSHTI 311
           CDG+  +CD    T+G+  +
Sbjct: 493 CDGKPGLCDAMKPTKGTELL 512


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,847
Number of Sequences: 438
Number of extensions: 4472
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)