Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I11
         (877 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g42620.1 68418.m05188 expressed protein                             32   0.58 
At2g20465.1 68415.m02389 expressed protein                             31   0.76 
At2g20070.1 68415.m02345 hypothetical protein weak similarity to...    30   2.3  
At5g63660.1 68418.m07992 plant defensin-fusion protein, putative...    29   5.4  
At3g63360.1 68416.m07131 defensin-related contains weak similari...    28   7.1  
At2g02130.1 68415.m00149 plant defensin-fusion protein, putative...    28   9.4  
At2g02120.1 68415.m00148 plant defensin-fusion protein, putative...    28   9.4  
At2g02100.1 68415.m00146 plant defensin-fusion protein, putative...    28   9.4  

>At5g42620.1 68418.m05188 expressed protein
          Length = 841

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
 Frame = +1

Query: 334 LDCTTSECDQLCRRFGFSGGICVGGQCE--CGNIHRNADQNENQ--STLENC-DMRECDX 498
           +DC+T+ CD+ C      GG+C  G CE  C +      QN ++  ++L  C D+ E D 
Sbjct: 659 IDCSTAICDEQC---SLHGGVCDNGVCEFRCSDYAGYTCQNSSKLVTSLLVCKDVLEKDM 715

Query: 499 S 501
           S
Sbjct: 716 S 716


>At2g20465.1 68415.m02389 expressed protein 
          Length = 89

 Score = 31.5 bits (68), Expect = 0.76
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +3

Query: 207 ACDQLCRELGFPSGACDG--EQCVCDNFL 287
           +CD  C+ L F SG C G  E+C C +++
Sbjct: 60  SCDLFCKRLKFESGLCTGDLEKCCCIDYI 88



 Score = 28.3 bits (60), Expect = 7.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 349 SECDQLCRRFGFSGGICVGGQCEC 420
           + CD  C+R  F  G+C G   +C
Sbjct: 59  ASCDLFCKRLKFESGLCTGDLEKC 82


>At2g20070.1 68415.m02345 hypothetical protein weak similarity to
           SP|O61705 Neurotoxin BmK-X precursor (BmK10)
           (Alpha-neurotoxin TX9) {Mesobuthus martensii}
          Length = 89

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +3

Query: 210 CDQLCRELGFPSGA-C-DGEQCVC 275
           C+ LC ELGFP+G  C  G  C C
Sbjct: 52  CNGLCHELGFPAGGYCKPGNTCCC 75


>At5g63660.1 68418.m07992 plant defensin-fusion protein, putative
           (PDF2.5) plant defensin protein family member, personal
           communication, Bart Thomma
           (Bart.Thomma@agr.kuleuven.ac.be)
          Length = 73

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +1

Query: 340 CTTSE-CDQLCRRFGFSGGICVGGQCEC 420
           CT++  C  +CR  GFSGG C G    C
Sbjct: 40  CTSNHNCAIVCRNEGFSGGRCHGFHRRC 67


>At3g63360.1 68416.m07131 defensin-related contains weak similarity
           to defensin [Capsicum annuum] gi|1200228|emb|CAA65045
          Length = 85

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +3

Query: 210 CDQLCRELGFPSGAC--DGEQCVCDN 281
           CD LC+  G  SG C  D  +C+C N
Sbjct: 54  CDNLCKYEGAISGVCVSDPHRCLCRN 79


>At2g02130.1 68415.m00149 plant defensin-fusion protein, putative
           (PDF2.3) plant defensin protein family member, personal
           communication, Bart Thomma
           (Bart.Thomma@agr.kuleuven.ac.be)
          Length = 77

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 319 HRLPQLDCTTSECDQLCRRFGFSGGICVGGQCEC 420
           HR      +T  C  +C   GF GG C G +  C
Sbjct: 38  HRFKGPCVSTHNCANVCHNEGFGGGKCRGFRRRC 71


>At2g02120.1 68415.m00148 plant defensin-fusion protein, putative
           (PDF2.1) plant defensin protein family member, personal
           communication, Bart Thomma
           (Bart.Thomma@agr.kuleuven.ac.be); contains a
           gamma-thionin family signature (PDOC00725)
          Length = 77

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
 Frame = +3

Query: 210 CDQLCRELGFPSGACDG--EQCVC 275
           C+ +C   GFP G C G   +C C
Sbjct: 50  CENVCHNEGFPGGDCRGFRRRCFC 73


>At2g02100.1 68415.m00146 plant defensin-fusion protein, putative
           (PDF2.2) plant defensin protein family member, personal
           communication, Bart Thomma
           (Bart.Thomma@agr.kuleuven.ac.be); similar to
           SWISS-PROT:O65740
          Length = 77

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 319 HRLPQLDCTTSECDQLCRRFGFSGGICVGGQCEC 420
           HR      + S C  +C   GF GG C G +  C
Sbjct: 38  HRFKGTCVSASNCANVCHNEGFVGGNCRGFRRRC 71


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,667,051
Number of Sequences: 28952
Number of extensions: 346037
Number of successful extensions: 887
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2058178400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)