Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I10
         (890 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0373 + 23581812-23583293                                         30   2.1  
06_03_1363 - 29576265-29577575                                         29   5.0  
02_04_0028 + 19027510-19027983,19028087-19028278,19028369-190285...    29   6.6  

>03_05_0373 + 23581812-23583293
          Length = 493

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -1

Query: 455 DVQGGPCGAPRPCARCSASTVPKPPW 378
           D  GG   A    +RCSAST PK PW
Sbjct: 53  DGAGGYGSAASSPSRCSASTPPKSPW 78


>06_03_1363 - 29576265-29577575
          Length = 436

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -1

Query: 512 TVFCTAACSFSPEGGGVLLDVQGGPCGAPRPCARCSASTVPKPP 381
           TV    AC  +P GG VL+ V   P   P P AR  +   P PP
Sbjct: 367 TVAGGKACVVAPGGGKVLI-VDVTPPPPPPPAARRESWAAPPPP 409


>02_04_0028 +
           19027510-19027983,19028087-19028278,19028369-19028545,
           19029568-19029663,19030487-19030618,19030950-19031008,
           19031234-19031321,19031433-19031693
          Length = 492

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 21/61 (34%), Positives = 25/61 (40%)
 Frame = -1

Query: 524 WDSCTVFCTAACSFSPEGGGVLLDVQGGPCGAPRPCARCSASTVPKPPWPCRSRLRALPG 345
           W S +   TAA   +P G       QGG   A RP         P+PP P    LR  PG
Sbjct: 63  WGSSSSAATAA---APGGASTAAAAQGGGSAASRPPRPPRPPLPPRPPRPPLPPLRE-PG 118

Query: 344 D 342
           +
Sbjct: 119 E 119


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,222,408
Number of Sequences: 37544
Number of extensions: 308128
Number of successful extensions: 1272
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)