BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_I10 (890 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AB208784-1|BAD92021.1| 222|Homo sapiens zinc finger protein 76 ... 33 1.4 AK092577-1|BAC03917.1| 142|Homo sapiens oA ligase form XL-III. ... 31 4.2 AL008583-2|CAA15430.2| 488|Homo sapiens neuronal pentraxin rece... 30 9.8 >AB208784-1|BAD92021.1| 222|Homo sapiens zinc finger protein 76 (expressed in testis) variant protein. Length = 222 Score = 33.1 bits (72), Expect = 1.4 Identities = 19/56 (33%), Positives = 24/56 (42%) Frame = -1 Query: 503 CTAACSFSPEGGGVLLDVQGGPCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 336 C AA + SP + +P P A + T PPWPC S A+P SW Sbjct: 138 CQAAGNASPSTRACISTTWCTHTASPTPAAPAARPTGRPPPWPCTS---AVPMASW 190 >AK092577-1|BAC03917.1| 142|Homo sapiens oA ligase form XL-III. protein. Length = 142 Score = 31.5 bits (68), Expect = 4.2 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = -1 Query: 497 AACSFSPEGGGVLLDVQGGPCGAPRPCARCSASTVPKPPWPCRS 366 +AC++ G L + G GA PC +A T PPWP S Sbjct: 14 SACAWPMAPMGALAAWRSGMAGAGAPCV-MTAGTCAMPPWPAGS 56 >AL008583-2|CAA15430.2| 488|Homo sapiens neuronal pentraxin receptor protein. Length = 488 Score = 30.3 bits (65), Expect = 9.8 Identities = 20/58 (34%), Positives = 24/58 (41%) Frame = -1 Query: 521 DSCTVFCTAACSFSPEGGGVLLDVQGGPCGAPRPCARCSASTVPKPPWPCRSRLRALP 348 D+ +V AA S P+ L GG G P +AS P PP P SR P Sbjct: 30 DNASVASGAAASPGPQRSLSALHGAGGSAGPPALPGAPAASAHPLPPGPLFSRFLCTP 87 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 89,571,309 Number of Sequences: 237096 Number of extensions: 1599040 Number of successful extensions: 5709 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 5210 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5708 length of database: 76,859,062 effective HSP length: 90 effective length of database: 55,520,422 effective search space used: 11437206932 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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