Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I10
         (890 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208784-1|BAD92021.1|  222|Homo sapiens zinc finger protein 76 ...    33   1.4  
AK092577-1|BAC03917.1|  142|Homo sapiens oA ligase form XL-III. ...    31   4.2  
AL008583-2|CAA15430.2|  488|Homo sapiens neuronal pentraxin rece...    30   9.8  

>AB208784-1|BAD92021.1|  222|Homo sapiens zinc finger protein 76
           (expressed in testis) variant protein.
          Length = 222

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = -1

Query: 503 CTAACSFSPEGGGVLLDVQGGPCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 336
           C AA + SP     +         +P P A  +  T   PPWPC S   A+P  SW
Sbjct: 138 CQAAGNASPSTRACISTTWCTHTASPTPAAPAARPTGRPPPWPCTS---AVPMASW 190


>AK092577-1|BAC03917.1|  142|Homo sapiens oA ligase form XL-III.
           protein.
          Length = 142

 Score = 31.5 bits (68), Expect = 4.2
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -1

Query: 497 AACSFSPEGGGVLLDVQGGPCGAPRPCARCSASTVPKPPWPCRS 366
           +AC++     G L   + G  GA  PC   +A T   PPWP  S
Sbjct: 14  SACAWPMAPMGALAAWRSGMAGAGAPCV-MTAGTCAMPPWPAGS 56


>AL008583-2|CAA15430.2|  488|Homo sapiens neuronal pentraxin
           receptor protein.
          Length = 488

 Score = 30.3 bits (65), Expect = 9.8
 Identities = 20/58 (34%), Positives = 24/58 (41%)
 Frame = -1

Query: 521 DSCTVFCTAACSFSPEGGGVLLDVQGGPCGAPRPCARCSASTVPKPPWPCRSRLRALP 348
           D+ +V   AA S  P+     L   GG  G P      +AS  P PP P  SR    P
Sbjct: 30  DNASVASGAAASPGPQRSLSALHGAGGSAGPPALPGAPAASAHPLPPGPLFSRFLCTP 87


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,571,309
Number of Sequences: 237096
Number of extensions: 1599040
Number of successful extensions: 5709
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5708
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)