Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I10
         (890 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g39420.1 68418.m04775 protein kinase family protein contains ...    31   1.4  
At2g48160.1 68415.m06031 PWWP domain-containing protein                30   2.4  
At2g01220.2 68415.m00035 expressed protein                             30   2.4  
At2g01220.1 68415.m00034 expressed protein                             30   2.4  
At1g76020.1 68414.m08826 expressed protein                             29   5.5  
At1g20225.1 68414.m02526 expressed protein                             28   7.2  
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro...    28   9.6  
At4g28020.1 68417.m04019 expressed protein contains Pfam PF01980...    28   9.6  
At1g26650.1 68414.m03245 expressed protein                             28   9.6  

>At5g39420.1 68418.m04775 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 644

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = +2

Query: 275 DFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEE 430
           DFS+  +D  +  L+ L    +S+ G L   +GK  E L+++  NI +   +
Sbjct: 583 DFSQREEDSPKKTLEHLQFGKQSISGPLIFKSGKIDEILQRNESNIRQAVRK 634


>At2g48160.1 68415.m06031 PWWP domain-containing protein
          Length = 1366

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
 Frame = +3

Query: 63   PVRISSALSLSTVHH-GRQVR--SSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP 221
            P+R++  LS ST+H+ G +    S ++L  S P++DG+  + R    H  PH   P
Sbjct: 1184 PLRMNPPLSGSTMHYQGPESSYISGVQLTNSIPQADGSNFQHRPYPSHPHPHPPPP 1239


>At2g01220.2 68415.m00035 expressed protein 
          Length = 388

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -1

Query: 488 SFSP--EGGGVLLDVQGGPCGAPRPCARCSASTVPKPP 381
           SF+P  EG   LL+V    CG   PC   SA    KPP
Sbjct: 221 SFNPLHEGHLKLLEVAMSVCGGGYPCFEISAINADKPP 258


>At2g01220.1 68415.m00034 expressed protein 
          Length = 387

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
 Frame = -1

Query: 488 SFSP--EGGGVLLDVQGGPCGAPRPCARCSASTVPKPP 381
           SF+P  EG   LL+V    CG   PC   SA    KPP
Sbjct: 220 SFNPLHEGHLKLLEVAMSVCGGGYPCFEISAINADKPP 257


>At1g76020.1 68414.m08826 expressed protein
          Length = 225

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = +3

Query: 18  HYREFLRFDTPLCCSPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRS 179
           H   F    T L   P  +   + L TV  G   +S L+   S  +SD ATR S
Sbjct: 117 HQSLFYNAQTQLLSRPAVVEKIVELGTVSLGNSYQSVLKSGFSDKKSDRATRVS 170


>At1g20225.1 68414.m02526 expressed protein
          Length = 233

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 18/54 (33%), Positives = 22/54 (40%)
 Frame = +3

Query: 18  HYREFLRFDTPLCCSPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRS 179
           H   F    T L   P  +   + L TV  G    S L+   S  +SD ATR S
Sbjct: 118 HQTLFYNSQTQLMSRPAVVEELIKLGTVTLGNSYHSPLKSGFSNSKSDLATRVS 171


>At5g07780.1 68418.m00890 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02181
          Length = 464

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -1

Query: 440 PCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 336
           P   PRPC+R   +     P     + RALPG  W
Sbjct: 61  PPPLPRPCSRPPKTKCSLKPLHWVKKTRALPGSLW 95


>At4g28020.1 68417.m04019 expressed protein contains Pfam PF01980:
           Uncharacterised protein family
          Length = 351

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 190 KDIEHHTKEFHKTLXTTV-*LAHQVKGRTGLQQGLEGRL 303
           +D+E+  KEF K+L +T+   A + KGR   QQ L   L
Sbjct: 38  EDLENRIKEFEKSLGSTLEKSASERKGRVKAQQALREAL 76


>At1g26650.1 68414.m03245 expressed protein
          Length = 335

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -2

Query: 361 SERSLETLGEGVELLQHGLGAVLPSLAEVLC 269
           S  +LE L E V +L++ LGA++ + A ++C
Sbjct: 24  SSNALEILRETVRILRYNLGALMLTTAVLIC 54


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,170,849
Number of Sequences: 28952
Number of extensions: 214835
Number of successful extensions: 764
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2090971320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)