Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I09
         (949 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VFU0 Cluster: CG9757-PA; n=3; cellular organisms|Rep:...    36   2.0  
UniRef50_A1CEV2 Cluster: Extracellular threonine rich protein, p...    34   4.6  
UniRef50_Q92945 Cluster: Far upstream element-binding protein 2;...    34   6.1  

>UniRef50_Q9VFU0 Cluster: CG9757-PA; n=3; cellular organisms|Rep:
           CG9757-PA - Drosophila melanogaster (Fruit fly)
          Length = 127

 Score = 35.5 bits (78), Expect = 2.0
 Identities = 19/41 (46%), Positives = 19/41 (46%)
 Frame = -1

Query: 847 GGGEXGXGPXGGV*RGGXPRGXF*XPPGGVAPPXXXGGGXF 725
           GGG  G G  GG   GG P G F  P GG   P    GG F
Sbjct: 85  GGGFGGQGGFGGGGFGGRPGGGFGGPGGGFGGPGGGFGGGF 125


>UniRef50_A1CEV2 Cluster: Extracellular threonine rich protein,
           putative; n=1; Aspergillus clavatus|Rep: Extracellular
           threonine rich protein, putative - Aspergillus clavatus
          Length = 893

 Score = 34.3 bits (75), Expect = 4.6
 Identities = 26/69 (37%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
 Frame = -2

Query: 645 GPXGGPXGXKXFFPGXP--PXXGENXXT-PLXXXGXXXPPPXKTGXPGV-XXGGKGXGAQ 478
           GP GGP G     PG P  P  G    T P    G    PP  TG  G    GG G   Q
Sbjct: 446 GPPGGPGGPGPGGPGVPEAPSGGGGACTVPTAPPGGPGSPPQATGPGGPGGPGGPGAPPQ 505

Query: 477 KXNPXSPGG 451
              P  P G
Sbjct: 506 ATGPGGPEG 514


>UniRef50_Q92945 Cluster: Far upstream element-binding protein 2;
           n=98; Euteleostomi|Rep: Far upstream element-binding
           protein 2 - Homo sapiens (Human)
          Length = 710

 Score = 33.9 bits (74), Expect = 6.1
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -2

Query: 537 PPXKTGXPGVXXGGKGXGAQKXNPXSPGGGXXFXI 433
           PP   G PG+  GG+G G  + N   PGG   F I
Sbjct: 397 PPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSI 431


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,784,252
Number of Sequences: 1657284
Number of extensions: 7966115
Number of successful extensions: 14691
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13381
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 87365783978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)