Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I09
         (949 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U94832-1|AAB53222.1|  711|Homo sapiens KSRP protein.                   34   0.87 
BC085004-1|AAH85004.1|  710|Homo sapiens KHSRP protein protein.        34   0.87 
AB209662-1|BAD92899.1|  384|Homo sapiens KH-type splicing regula...    34   0.87 
BC066943-1|AAH66943.1|  148|Homo sapiens proline rich 13 protein.      31   8.1  
BC041772-1|AAH41772.2|  549|Homo sapiens SPNS2 protein protein.        31   8.1  
BC016064-1|AAH16064.1|  148|Homo sapiens proline rich 13 protein.      31   8.1  
BC014257-1|AAH14257.1|  148|Homo sapiens proline rich 13 protein.      31   8.1  

>U94832-1|AAB53222.1|  711|Homo sapiens KSRP protein.
          Length = 711

 Score = 33.9 bits (74), Expect = 0.87
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -2

Query: 537 PPXKTGXPGVXXGGKGXGAQKXNPXSPGGGXXFXI 433
           PP   G PG+  GG+G G  + N   PGG   F I
Sbjct: 397 PPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSI 431


>BC085004-1|AAH85004.1|  710|Homo sapiens KHSRP protein protein.
          Length = 710

 Score = 33.9 bits (74), Expect = 0.87
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -2

Query: 537 PPXKTGXPGVXXGGKGXGAQKXNPXSPGGGXXFXI 433
           PP   G PG+  GG+G G  + N   PGG   F I
Sbjct: 397 PPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSI 431


>AB209662-1|BAD92899.1|  384|Homo sapiens KH-type splicing
           regulatory protein (FUSE binding protein 2) variant
           protein.
          Length = 384

 Score = 33.9 bits (74), Expect = 0.87
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -2

Query: 537 PPXKTGXPGVXXGGKGXGAQKXNPXSPGGGXXFXI 433
           PP   G PG+  GG+G G  + N   PGG   F I
Sbjct: 215 PPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSI 249


>BC066943-1|AAH66943.1|  148|Homo sapiens proline rich 13 protein.
          Length = 148

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 15/45 (33%), Positives = 16/45 (35%)
 Frame = -2

Query: 642 PXGGPXGXKXFFPGXPPXXGENXXTPLXXXGXXXPPPXKTGXPGV 508
           P G P G   F PG PP        P        PPP     PG+
Sbjct: 44  PPGAPHGNPAFPPGGPPHPVPQPGYPGCQLLGPYPPPYPPPAPGI 88


>BC041772-1|AAH41772.2|  549|Homo sapiens SPNS2 protein protein.
          Length = 549

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -2

Query: 537 PPXKTGXPGVXXGGKGXGAQKXNPXSPGGG 448
           PP   G PG     KG GAQ+  P S G G
Sbjct: 71  PPGTPGTPGCAATAKGPGAQQPKPASLGRG 100


>BC016064-1|AAH16064.1|  148|Homo sapiens proline rich 13 protein.
          Length = 148

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 15/45 (33%), Positives = 16/45 (35%)
 Frame = -2

Query: 642 PXGGPXGXKXFFPGXPPXXGENXXTPLXXXGXXXPPPXKTGXPGV 508
           P G P G   F PG PP        P        PPP     PG+
Sbjct: 44  PPGAPHGNPAFPPGGPPHPVPQPGYPGCQPLGPYPPPYPPPAPGI 88


>BC014257-1|AAH14257.1|  148|Homo sapiens proline rich 13 protein.
          Length = 148

 Score = 30.7 bits (66), Expect = 8.1
 Identities = 15/45 (33%), Positives = 16/45 (35%)
 Frame = -2

Query: 642 PXGGPXGXKXFFPGXPPXXGENXXTPLXXXGXXXPPPXKTGXPGV 508
           P G P G   F PG PP        P        PPP     PG+
Sbjct: 44  PPGAPHGNPAFPPGGPPHPVPQPGYPGCQPLGPYPPPYPPPAPGI 88


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,971,780
Number of Sequences: 237096
Number of extensions: 1938794
Number of successful extensions: 4377
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4052
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12492094950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)