BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_I07 (1546 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q4QE97 Cluster: Formin, putative; n=3; Leishmania|Rep: ... 27 3.3 >UniRef50_Q4QE97 Cluster: Formin, putative; n=3; Leishmania|Rep: Formin, putative - Leishmania major Length = 1300 Score = 27.1 bits (57), Expect(3) = 3.3 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%) Frame = +1 Query: 715 PXXPNXAXXXKDPAGXPPP-TXXQXTPTGGKQXP 813 P P + PAG PPP PTGG + P Sbjct: 630 PPPPGGSGVSSPPAGLPPPHPPGLPPPTGGPKQP 663 Score = 24.2 bits (50), Expect(3) = 3.3 Identities = 10/25 (40%), Positives = 10/25 (40%) Frame = +1 Query: 937 PPPPPPXXXXXXRXRXGGGXXXSXG 1011 PPPPPP R G G G Sbjct: 668 PPPPPPPPPPPPPPRMGNGPPPPPG 692 Score = 21.4 bits (43), Expect(3) = 3.3 Identities = 7/13 (53%), Positives = 7/13 (53%) Frame = +1 Query: 916 PXXXXXXPPPPPP 954 P PPPPPP Sbjct: 656 PTGGPKQPPPPPP 668 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.305 0.138 0.441 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 592,491,364 Number of Sequences: 1657284 Number of extensions: 7546133 Number of successful extensions: 16525 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 6976 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 14903 length of database: 575,637,011 effective HSP length: 104 effective length of database: 403,279,475 effective search space used: 165344584750 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 43 (21.8 bits)
- SilkBase 1999-2023 -