Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I07
         (1546 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0252 + 1868670-1869200,1870167-1871120                           30   5.6  
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794...    30   5.6  
11_01_0252 + 1934505-1935032,1936001-1936957                           29   7.5  
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    29   7.5  

>12_01_0252 + 1868670-1869200,1870167-1871120
          Length = 494

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -1

Query: 994 PPPXPXPXXXXPXXGGGGG 938
           PPP P P    P  GGGGG
Sbjct: 63  PPPPPPPPLNWPTAGGGGG 81



 Score = 29.5 bits (63), Expect = 7.5
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +2

Query: 938  PPPPPXXXXPXXGXGXGGGXXXAXXGXXG 1024
            PPPPP    P  G G GG       G  G
Sbjct: 65   PPPPPPLNWPTAGGGGGGSGGGGRGGAGG 93


>11_02_0065 -
           7938007-7938393,7939292-7939435,7940597-7940665,
           7940762-7940809,7941488-7941584,7941688-7941767,
           7941841-7941912,7942256-7942350,7943903-7943984,
           7945176-7945209,7945255-7945262,7945657-7946058
          Length = 505

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -1

Query: 994 PPPXPXPXXXXPXXGGGGG 938
           PPP P P    P  GGGGG
Sbjct: 79  PPPPPPPFEYYPAVGGGGG 97


>11_01_0252 + 1934505-1935032,1936001-1936957
          Length = 494

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +2

Query: 938  PPPPPXXXXPXXGXGXGGGXXXAXXGXXG 1024
            PPPPP    P  G G GG       G  G
Sbjct: 64   PPPPPPLNWPMAGGGGGGSGGGGRGGAGG 92


>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 12/30 (40%), Positives = 12/30 (40%)
 Frame = -1

Query: 994 PPPXPXPXXXXPXXGGGGGAXXXXXXGPXP 905
           PPP P P    P    GGG       GP P
Sbjct: 8   PPPPPPPPQHPPPPQAGGGGGGEFYRGPPP 37



 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -1

Query: 994 PPPXPXPXXXXPXXGGGGGAXXXXXXGPXPXL 899
           PPP P      P  GGGGG        P P +
Sbjct: 10  PPPPPPQHPPPPQAGGGGGGEFYRGPPPQPPM 41


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.305    0.138    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,794,252
Number of Sequences: 37544
Number of extensions: 382673
Number of successful extensions: 1466
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4977304332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)