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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I06
         (913 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellu...   186   7e-46
UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishma...   135   2e-30
UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreoc...   118   2e-25
UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|R...   115   2e-24
UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archa...   101   2e-20
UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiell...    99   1e-19
UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermo...    99   2e-19
UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultu...    93   7e-18
UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole ge...    68   4e-10
UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1; ...    64   4e-09
UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; ...    60   6e-08
UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n...    55   2e-06
UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15; Bacter...    51   5e-05
UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3; ...    50   8e-05
UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular or...    49   2e-04
UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacter...    48   3e-04
UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul...    46   0.001
UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu...    46   0.001
UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis...    46   0.002
UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639...    45   0.002
UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellu...    45   0.002
UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellu...    43   0.013
UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33; Bacter...    42   0.017
UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus ...    42   0.022
UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putati...    40   0.067
UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps...    40   0.067
UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1; Neorick...    40   0.088
UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whol...    40   0.12 
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru...    39   0.15 
UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29; ...    38   0.27 
UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; ...    38   0.27 
UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=...    36   1.1  
UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=...    36   1.4  
UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;...    36   1.9  
UniRef50_Q9XTP8 Cluster: 205 kDa Pk1(B+)1+ SICAvar antigen; n=1;...    34   4.4  
UniRef50_UPI0000586F02 Cluster: PREDICTED: hypothetical protein ...    34   5.8  
UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11; ...    34   5.8  

>UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellular
           organisms|Rep: 40S ribosomal protein S14 - Homo sapiens
           (Human)
          Length = 151

 Score =  186 bits (453), Expect = 7e-46
 Identities = 94/134 (70%), Positives = 100/134 (74%)
 Frame = +1

Query: 79  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 258
           MAPRK K  KEE  ++LGPQ   GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1   MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60

Query: 259 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXX 438
           KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA            AQ       
Sbjct: 61  KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALA 120

Query: 439 XXXMKIGRIEDVTP 480
              MKIGRIEDVTP
Sbjct: 121 RSGMKIGRIEDVTP 134


>UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishmania
           major|Rep: 40S ribosomal protein S14 - Leishmania major
          Length = 203

 Score =  135 bits (326), Expect = 2e-30
 Identities = 63/90 (70%), Positives = 74/90 (82%)
 Frame = +1

Query: 106 KEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEA 285
           K+EV+   GP    G+ V+GV HIFASFNDTFVHVTD+SGRET  +VTGGMKVKADRDE+
Sbjct: 13  KQEVKA-YGPNVKKGDLVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMKVKADRDES 71

Query: 286 SPYAAMLAAQDVAEKCKTLGITALHIKLRA 375
           SPYAAM+AAQDV  +CK  GI ALH+K+RA
Sbjct: 72  SPYAAMMAAQDVVARCKECGINALHVKMRA 101


>UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1;
           Ostreococcus tauri|Rep: 40S ribosomal protein S14 -
           Ostreococcus tauri
          Length = 243

 Score =  118 bits (285), Expect = 2e-25
 Identities = 59/92 (64%), Positives = 66/92 (71%)
 Frame = +1

Query: 205 HVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXX 384
           HVTDLSG+ET++R TGGMKVKADRDE+SPYAAMLAAQDVA +CK LGITALHIK+RA   
Sbjct: 90  HVTDLSGKETLSRCTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKMRAKGG 149

Query: 385 XXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTP 480
                     Q          +KIGRIEDVTP
Sbjct: 150 NKTKSPGPGGQSALRALSRSGIKIGRIEDVTP 181



 Score = 48.8 bits (111), Expect = 2e-04
 Identities = 25/40 (62%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +1

Query: 88  RKNKVAKEEVQVT-LGPQHLVGETVFGVAHIFASFNDTFV 204
           R   V+   V  T +GPQ   GE VFGVAHIFASFNDTFV
Sbjct: 5   RHRSVSVRRVMATYVGPQAREGELVFGVAHIFASFNDTFV 44


>UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|Rep:
           Ribosomal protein S14 - Palaemonetes pugio
          Length = 77

 Score =  115 bits (276), Expect = 2e-24
 Identities = 55/70 (78%), Positives = 58/70 (82%)
 Frame = +1

Query: 79  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 258
           MAPRK K  KEEVQV LGPQ   GE VF V HI+AS+NDTFVHVTDLSGRETI RVTGG 
Sbjct: 1   MAPRKGKTPKEEVQVQLGPQVREGENVFAVCHIYASYNDTFVHVTDLSGRETIIRVTGGQ 60

Query: 259 KVKADRDEAS 288
           KVKADRDE+S
Sbjct: 61  KVKADRDESS 70


>UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15;
           Archaea|Rep: 30S ribosomal protein S11P - Methanococcus
           jannaschii
          Length = 129

 Score =  101 bits (243), Expect = 2e-20
 Identities = 50/107 (46%), Positives = 66/107 (61%)
 Frame = +1

Query: 160 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKT 339
           +G+ HI++S+N+T +H TD++G ETIARV+GG   +  RDE SPYAAM AA  +AE  K 
Sbjct: 9   WGIVHIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSPYAAMQAAFKLAEVLKE 68

Query: 340 LGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTP 480
            GI  +HIK+RA            AQ          ++IGRIEDVTP
Sbjct: 69  RGIENIHIKVRAPGGSGQKNPGPGAQAAIRALARAGLRIGRIEDVTP 115


>UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiella
           natans|Rep: Ribosomal protein S14 - Bigelowiella natans
           (Pedinomonas minutissima) (Chlorarachnion sp.(strain
           CCMP 621))
          Length = 145

 Score = 99.1 bits (236), Expect = 1e-19
 Identities = 48/108 (44%), Positives = 63/108 (58%)
 Frame = +1

Query: 157 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCK 336
           +FG+ HI ++ NDT +HVTD++G ETI+R++ G+     +D+ S Y AMLA Q V+  CK
Sbjct: 11  LFGILHILSTKNDTIIHVTDITGSETISRISSGIVATNGKDKKSNYCAMLATQKVSNVCK 70

Query: 337 TLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTP 480
            LGI ALHIK+RA            A            KIGRIED TP
Sbjct: 71  VLGINALHIKIRARGGNASHLISTGAHTVVTTLVRLGFKIGRIEDTTP 118


>UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2;
           Thermoprotei|Rep: 30S ribosomal protein S11P -
           Cenarchaeum symbiosum
          Length = 198

 Score = 98.7 bits (235), Expect = 2e-19
 Identities = 47/116 (40%), Positives = 68/116 (58%)
 Frame = +1

Query: 133 PQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAA 312
           P+    +   G+AHI++S+N+T +H+TDL+G ET++  +GG+ V ADR E+SP+AAM AA
Sbjct: 66  PETTPADEKLGIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSPFAAMKAA 125

Query: 313 QDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTP 480
             V E  +  G T  HI++RA            AQ           +IGRI+DVTP
Sbjct: 126 NKVIESARAKGFTGFHIRVRAVGGVGSRVPGPGAQAAIRALARGGFRIGRIDDVTP 181


>UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultured
           euryarchaeote ARMAN-2|Rep: 30S ribosomal protein S11 -
           uncultured euryarchaeote ARMAN-2
          Length = 169

 Score = 93.5 bits (222), Expect = 7e-18
 Identities = 49/107 (45%), Positives = 64/107 (59%)
 Frame = +1

Query: 160 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKT 339
           + VAH+++S NDT + +TDLSG ETIA  +GGM V AD  E SPYAAM AA  VA + K 
Sbjct: 46  WAVAHVYSSKNDTIITLTDLSGSETIAVGSGGMMVNADSQEGSPYAAMQAAYKVAAEAKE 105

Query: 340 LGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXMKIGRIEDVTP 480
            GIT ++I++RA            AQ          +++ RIEDVTP
Sbjct: 106 KGITNINIEIRAPGGHGSKTPGHGAQAVVRVLARSGLRVNRIEDVTP 152


>UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole
           genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_246, whole genome shotgun
           sequence - Vitis vinifera (Grape)
          Length = 182

 Score = 67.7 bits (158), Expect = 4e-10
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +1

Query: 229 ETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 375
           ET+ R TGGMK K D +E+SP AAM AAQDV+++CK L IT LH+KL A
Sbjct: 50  ETLVRTTGGMKEKTDGEESSPCAAMPAAQDVSQECKELDITVLHVKLHA 98


>UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 104

 Score = 64.5 bits (150), Expect = 4e-09
 Identities = 31/49 (63%), Positives = 38/49 (77%)
 Frame = +1

Query: 229 ETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 375
           ET+ R TGGMK KAD +E+SP AAM AAQDV+++ K L IT LH+KL A
Sbjct: 29  ETLVRSTGGMKEKADGEESSPCAAMPAAQDVSQRFKELDITVLHVKLHA 77


>UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3;
           Homo/Pan/Gorilla group|Rep: Similar to ribosomal protein
           S14 - Homo sapiens (Human)
          Length = 350

 Score = 60.5 bits (140), Expect = 6e-08
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +1

Query: 256 MKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 375
           MK +AD+DE+SP  AML AQDV ++CK LGITALHIKL A
Sbjct: 1   MKEQADQDESSPCTAMLTAQDVVQRCKELGITALHIKLLA 40


>UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n=1;
           Rattus norvegicus|Rep: UPI0000DBF82A UniRef100 entry -
           Rattus norvegicus
          Length = 119

 Score = 55.2 bits (127), Expect = 2e-06
 Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
 Frame = +1

Query: 121 VTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGR-ETIARVTGGMKVKADRDEASPYA 297
           ++L PQ + G+ V GV +IFASF D+F++ TD+ G+  T   VT  MK +    E +P  
Sbjct: 5   LSLRPQVVEGQNVLGVCYIFASFGDSFIYGTDVYGKVNTCQYVTSRMKTQ--YAETNPCH 62

Query: 298 AMLA-AQDVAEKCKTLGITALHIKLR 372
            + A   DV  + K + + ALHI+L+
Sbjct: 63  RLHAGCLDVTHRFKEMSVPALHIRLQ 88


>UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15;
           Bacteria|Rep: 30S ribosomal protein S11 - Silicibacter
           pomeroyi
          Length = 130

 Score = 50.8 bits (116), Expect = 5e-05
 Identities = 24/70 (34%), Positives = 42/70 (60%)
 Frame = +1

Query: 163 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 342
           GVAH+ ++FN+T + ++D+ G        G M  K  R +++PYAA LAA+D   K +  
Sbjct: 20  GVAHVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSR-KSTPYAAQLAAEDAGRKAQDH 78

Query: 343 GITALHIKLR 372
           G+  L ++++
Sbjct: 79  GVKTLEVEVQ 88


>UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 332

 Score = 50.0 bits (114), Expect = 8e-05
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 244 VTGGMKVKADRDEASPYAAMLAAQDVAEKCK 336
           V GGMK+KAD DE+SPYAAML +QDVA  CK
Sbjct: 211 VGGGMKIKADCDESSPYAAMLVSQDVALCCK 241


>UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular
           organisms|Rep: Ribosomal protein S11 - Chlorokybus
           atmophyticus (Soil alga)
          Length = 262

 Score = 48.8 bits (111), Expect = 2e-04
 Identities = 27/70 (38%), Positives = 39/70 (55%)
 Frame = +1

Query: 163 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 342
           GVAHI  + N+T + +TDL G       +G +  K  R + S YAA  AA+  A+K   L
Sbjct: 152 GVAHIQTTLNNTIITITDLDGNTKSWSSSGSIGFKGSRRKTS-YAAQAAAETAAKKSIQL 210

Query: 343 GITALHIKLR 372
           GI  + +K+R
Sbjct: 211 GIKDVTVKIR 220


>UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48;
           Bacteria|Rep: 30S ribosomal protein S11 - Streptococcus
           mutans
          Length = 127

 Score = 48.4 bits (110), Expect = 3e-04
 Identities = 22/70 (31%), Positives = 41/70 (58%)
 Frame = +1

Query: 163 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 342
           G+AHI A+FN+T V +TD+ G        G +  K  R +++P+AA +AA+  A+  +  
Sbjct: 17  GIAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSR-KSTPFAAQMAAEAAAKSAQEH 75

Query: 343 GITALHIKLR 372
           G+  + + ++
Sbjct: 76  GLKTVEVTVK 85


>UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular
           organisms|Rep: 30S ribosomal protein S11 - Shewanella
           oneidensis
          Length = 130

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 23/67 (34%), Positives = 37/67 (55%)
 Frame = +1

Query: 163 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 342
           G+AHI ASFN+T V +TD  G       +GG   +  R +++P+AA +AA+      +  
Sbjct: 20  GMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSR-KSTPFAAQVAAERAGAAAQDY 78

Query: 343 GITALHI 363
           G+  L +
Sbjct: 79  GLKNLEV 85


>UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular
           organisms|Rep: 30S ribosomal protein S11 - Polaromonas
           sp. (strain JS666 / ATCC BAA-500)
          Length = 134

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 22/70 (31%), Positives = 39/70 (55%)
 Frame = +1

Query: 163 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 342
           G+AH+ ASFN+T + +TD  G       +GG   K  R +++P+AA +A++         
Sbjct: 24  GIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSR-KSTPFAAQVASEVAGRAAIEQ 82

Query: 343 GITALHIKLR 372
           GI  L ++++
Sbjct: 83  GIKNLDVEIK 92


>UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis
           vadensis ATCC BAA-548|Rep: Ribosomal protein S11 -
           Victivallis vadensis ATCC BAA-548
          Length = 148

 Score = 45.6 bits (103), Expect = 0.002
 Identities = 23/70 (32%), Positives = 41/70 (58%)
 Frame = +1

Query: 163 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 342
           G+A++ A+FN+T V  TDL G   I   TGG        +++ YAA + A D A+K + +
Sbjct: 38  GIAYVLATFNNTKVTFTDLHG-NVICWSTGGKNGFKGSRKSTAYAAQVIAGDAAKKAQLV 96

Query: 343 GITALHIKLR 372
           G+  + ++++
Sbjct: 97  GMKEVEVRIK 106


>UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639;
           n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
           protein PH1639 - Pyrococcus horikoshii
          Length = 102

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 28/95 (29%), Positives = 41/95 (43%)
 Frame = -2

Query: 474 DIFNAANLHT*TSKSPKCRLSTRTRGLCFVSTSSTELYVQGRYAKSFAFLCYILCRQHSS 295
           ++ N +   +  S+ P C L T  R   F S+      V    +    F C     +H  
Sbjct: 6   NVLNPSYFKSCPSQGPNCSLCTWPRSFAFASSWGPHPNVNTDNSLFQCFFCCSPSSKHCC 65

Query: 294 VG*RFITVSLHLHATSDTGDSFPAG*ISNMNECVI 190
           +G R I VS + H T+ +   F  G ISN+N  VI
Sbjct: 66  IGGRLIPVSFNYHTTAPSAYRFRTGDISNVNNGVI 100


>UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellular
           organisms|Rep: 30S ribosomal protein S11 - Acidobacteria
           bacterium (strain Ellin345)
          Length = 142

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 23/69 (33%), Positives = 40/69 (57%)
 Frame = +1

Query: 163 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 342
           G+AHI ASFN+T V ++D SG     + +G +  +  R + +P+AA  AA   A   +  
Sbjct: 32  GLAHIQASFNNTIVTISDPSGNVVSWKSSGSLGFRGSR-KGTPFAAQQAAMTAANMARDH 90

Query: 343 GITALHIKL 369
           G+ +L +++
Sbjct: 91  GMRSLDVRV 99


>UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellular
           organisms|Rep: 30S ribosomal protein S11 - Bacillus
           subtilis
          Length = 131

 Score = 42.7 bits (96), Expect = 0.013
 Identities = 21/70 (30%), Positives = 39/70 (55%)
 Frame = +1

Query: 163 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 342
           G+AHI ++FN+T V +TD  G        G +  +  R +++P+AA +AA+  A+     
Sbjct: 21  GIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSR-KSTPFAAQMAAETAAKGSIEH 79

Query: 343 GITALHIKLR 372
           G+  L + ++
Sbjct: 80  GLKTLEVTVK 89


>UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33;
           Bacteria|Rep: 30S ribosomal protein S11 - Mycoplasma
           pulmonis
          Length = 136

 Score = 42.3 bits (95), Expect = 0.017
 Identities = 24/70 (34%), Positives = 40/70 (57%)
 Frame = +1

Query: 163 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 342
           GVAHI ++ N+T V  +D  G       +G +  K  + + + YAA LAAQ+ +EK K  
Sbjct: 21  GVAHIHSTHNNTIVTFSDEKGNVISWASSGTIGYKGTKKKTA-YAAGLAAQNASEKAKEH 79

Query: 343 GITALHIKLR 372
           GI  + ++++
Sbjct: 80  GIREVSVRVK 89


>UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus
           oeni ATCC BAA-1163|Rep: Ribosomal protein S11 -
           Oenococcus oeni ATCC BAA-1163
          Length = 113

 Score = 41.9 bits (94), Expect = 0.022
 Identities = 22/70 (31%), Positives = 39/70 (55%)
 Frame = +1

Query: 163 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 342
           GVAHI ++FN+T V +TD +G        G +  K  R +++P+AA LA +  A+     
Sbjct: 22  GVAHIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSR-KSTPFAAQLAGEAAAKAAMEQ 80

Query: 343 GITALHIKLR 372
            + ++ I ++
Sbjct: 81  NMHSVAISVK 90


>UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putative;
           n=19; Spermatophyta|Rep: Small subunit ribosomal
           protein, putative - Oryza sativa subsp. japonica (Rice)
          Length = 366

 Score = 40.3 bits (90), Expect = 0.067
 Identities = 19/67 (28%), Positives = 34/67 (50%)
 Frame = +1

Query: 172 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 351
           H+    N TFV VTD+ G +      G ++ +  R   S YAA   A+ V    + +G+ 
Sbjct: 248 HVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLSKYAAEATAEHVGRAARKMGLK 307

Query: 352 ALHIKLR 372
           ++ +K++
Sbjct: 308 SVVMKVK 314


>UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps11
           - Ostreococcus tauri
          Length = 121

 Score = 40.3 bits (90), Expect = 0.067
 Identities = 23/66 (34%), Positives = 34/66 (51%)
 Frame = +1

Query: 175 IFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITA 354
           I  + N+TFV++TDL G       +G +  K  + ++S YAA    + V + C    I  
Sbjct: 15  ISTTLNNTFVNLTDLEGNTLCCVSSGSLGFKGSK-KSSSYAAQSTTEKVLQFCAQQSIEK 73

Query: 355 LHIKLR 372
           L IKLR
Sbjct: 74  LMIKLR 79


>UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1;
           Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
           protein S11 - Neorickettsia sennetsu (strain Miyayama)
          Length = 120

 Score = 39.9 bits (89), Expect = 0.088
 Identities = 21/71 (29%), Positives = 38/71 (53%)
 Frame = +1

Query: 157 VFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCK 336
           V G AH+  +FN+ ++ VTD  G       +G +  K ++ +++ YAA   A  +  K K
Sbjct: 8   VSGNAHVIVTFNNVYISVTDHQGNVQGWASSGSVGFKGNK-KSTAYAAQSVATTLMTKLK 66

Query: 337 TLGITALHIKL 369
            +G+  L++ L
Sbjct: 67  RIGLKILNVHL 77


>UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whole
           genome shotgun sequence; n=3; cellular organisms|Rep:
           Chromosome undetermined SCAF14706, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 215

 Score = 39.5 bits (88), Expect = 0.12
 Identities = 19/69 (27%), Positives = 40/69 (57%)
 Frame = +1

Query: 166 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 345
           +AH+ A++N+T + VTD +G+ ++ R + G +   +  +++P AA  A    A K    G
Sbjct: 106 IAHVKATYNNTHIQVTDSAGK-SMVRTSCGTEGFKNIKKSTPIAAQTAGISAAAKATAKG 164

Query: 346 ITALHIKLR 372
           +T + + ++
Sbjct: 165 VTFVRVVVK 173


>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
           Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
           (SV40)
          Length = 364

 Score = 39.1 bits (87), Expect = 0.15
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +2

Query: 680 DPDMIXYIDXFGQTTTKMQ 736
           DPDMI YID FGQTTT+MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364


>UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29;
           Magnoliophyta|Rep: Small subunit ribosomal protein -
           Berberis thunbergii (Japanese barberry)
          Length = 150

 Score = 38.3 bits (85), Expect = 0.27
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = +1

Query: 166 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 345
           + H+    N+TFV VTD  G +      G ++        S YAA   A+ V    + LG
Sbjct: 46  LVHLLPLHNNTFVTVTDARGNKKTGASAGSLEEFKGGSRLSRYAAKATAEHVGRSARNLG 105

Query: 346 ITALHIKLR 372
           + ++ +K++
Sbjct: 106 MKSVVMKVK 114


>UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11;
           n=85; Tracheophyta|Rep: Chloroplast 30S ribosomal
           protein S11 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 138

 Score = 38.3 bits (85), Expect = 0.27
 Identities = 22/70 (31%), Positives = 34/70 (48%)
 Frame = +1

Query: 163 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 342
           GV H+ ASFN+T V VTD+ GR       G    +  R   +P+AA  AA +        
Sbjct: 28  GVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTR-RGTPFAAQTAAGNAIRAVVDQ 86

Query: 343 GITALHIKLR 372
           G+    ++++
Sbjct: 87  GMQRAEVRIK 96


>UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=1;
           Prototheca wickerhamii|Rep: Mitochondrial ribosomal
           protein S11 - Prototheca wickerhamii
          Length = 128

 Score = 36.3 bits (80), Expect = 1.1
 Identities = 20/70 (28%), Positives = 37/70 (52%)
 Frame = +1

Query: 163 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 342
           G+ HI ++ N+T + +TDL G        G +  K  R +++ YA+  AA+ +A K    
Sbjct: 18  GIVHIQSTTNNTLITLTDLEGNTQFFVSAGTLGFKNSR-KSTVYASGAAAEALASKAFNE 76

Query: 343 GITALHIKLR 372
           G   + +K++
Sbjct: 77  GYRTIIVKIK 86


>UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=2;
           Arabidopsis thaliana|Rep: 30S ribosomal protein S11,
           putative - Arabidopsis thaliana (Mouse-ear cress)
          Length = 235

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 19/73 (26%), Positives = 35/73 (47%)
 Frame = +1

Query: 151 ETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEK 330
           ET   + HI    N+TFV VTD  G       +G +       + + Y A   A+++  +
Sbjct: 111 ETNADIIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRR 170

Query: 331 CKTLGITALHIKL 369
            K +G+ ++ +K+
Sbjct: 171 AKAMGLKSVVVKV 183


>UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;
           Streptophyta|Rep: Plastid 30S ribosomal protein S11 -
           Epifagus virginiana (Beechdrops)
          Length = 136

 Score = 35.5 bits (78), Expect = 1.9
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = +1

Query: 163 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAA 312
           GV H+  SFN+T V VTD+ GR       G    K  R   + +AA +AA
Sbjct: 28  GVIHVQTSFNNTIVAVTDIKGRVVSWSSAGTCGFKGTR-RGTSFAAQIAA 76


>UniRef50_Q9XTP8 Cluster: 205 kDa Pk1(B+)1+ SICAvar antigen; n=1;
           Plasmodium knowlesi|Rep: 205 kDa Pk1(B+)1+ SICAvar
           antigen - Plasmodium knowlesi
          Length = 1759

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = +3

Query: 309 GTGCSREMQNSWHNGLAHKAPCYWWKQNKDPWSWCSVCTSGS 434
           GT       NS  NG  H  PC+W K +K  W  C + TSGS
Sbjct: 212 GTKPGTSCHNS--NGKEHCVPCHWDKDDK--WKDCKITTSGS 249


>UniRef50_UPI0000586F02 Cluster: PREDICTED: hypothetical protein
           isoform 1; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: hypothetical protein isoform 1 -
           Strongylocentrotus purpuratus
          Length = 261

 Score = 33.9 bits (74), Expect = 5.8
 Identities = 20/69 (28%), Positives = 38/69 (55%)
 Frame = +1

Query: 166 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 345
           + +I A++N+T V V + +GR T+AR + G +   +  + +  AA  AA   A K    G
Sbjct: 152 IVNIKATYNNTHVSVAEHTGR-TVARTSCGTEGFKNAKKGTAIAAQTAAIAAATKAVDKG 210

Query: 346 ITALHIKLR 372
           + A+ + ++
Sbjct: 211 MNAVRVVIK 219


>UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11;
           n=10; cellular organisms|Rep: Chloroplast 30S ribosomal
           protein S11 - Cyanidium caldarium
          Length = 129

 Score = 33.9 bits (74), Expect = 5.8
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = +1

Query: 163 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 342
           G+  I ++FN+T V  TD  G+  IA  +GG +      + +P+AA  A + + +     
Sbjct: 19  GLIIINSTFNNTIVTATDCYGK-VIAWASGGTEGFKGAKKGTPFAAQSATEKLIKALLEQ 77

Query: 343 GITALHIKL 369
           G   +HI +
Sbjct: 78  GTQRIHISV 86


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,418,376
Number of Sequences: 1657284
Number of extensions: 14069243
Number of successful extensions: 29981
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 28805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29963
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83211448033
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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