BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_I05 (887 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g04970.1 68418.m00526 pectinesterase, putative contains simil... 32 0.44 At3g10720.2 68416.m01291 pectinesterase, putative contains simil... 31 1.4 At3g10720.1 68416.m01290 pectinesterase, putative contains simil... 31 1.4 At1g11090.1 68414.m01270 hydrolase, alpha/beta fold family prote... 29 3.1 At3g05620.1 68416.m00624 pectinesterase family protein contains ... 29 5.4 At1g04620.1 68414.m00456 coenzyme F420 hydrogenase family / dehy... 29 5.4 At4g00740.1 68417.m00101 dehydration-responsive protein-related ... 28 9.5 >At5g04970.1 68418.m00526 pectinesterase, putative contains similarity to pectinesterase from Vitis vinifera GI:15081598, Prunus persica SP|Q43062; contains Pfam profile PF01095 pectinesterase Length = 624 Score = 32.3 bits (70), Expect = 0.44 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 7/96 (7%) Frame = +2 Query: 86 WLL*KYSWFLCLLDTWLPMEMLF*NPANLVTCNALAVRQ----SSFWRKPVKGYHNTTYG 253 W S F + D ++ +++ F N A A+AVR S+F+R +GY +T Y Sbjct: 383 WTTYNSSTFAVVGDRFVAVDVTFRNTAGPEKHQAVAVRNNADGSTFYRCSFEGYQDTLYV 442 Query: 254 LSIH*FVTSLDVIAPND---AGVVIRFKNLNITGLK 352 S+ F D+ D F+N NI K Sbjct: 443 HSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYARK 478 >At3g10720.2 68416.m01291 pectinesterase, putative contains similarity to pectinesterase from Vitis vinifera GI:15081598, Prunus persica SP|Q43062; contains Pfam profile PF01095 pectinesterase Length = 619 Score = 30.7 bits (66), Expect = 1.4 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 7/96 (7%) Frame = +2 Query: 86 WLL*KYSWFLCLLDTWLPMEMLF*NPANLVTCNALAVRQ----SSFWRKPVKGYHNTTYG 253 W S F + + ++ +++ F N A A+A+R SSF+R +GY +T Y Sbjct: 378 WTTYNCSSFAVVGERFMAVDVTFRNTAGPEKHQAVALRNNAEGSSFYRCSFEGYQDTLYV 437 Query: 254 LSIH*FVTSLDVIAPND---AGVVIRFKNLNITGLK 352 S+ F D+ D F+N NI K Sbjct: 438 HSLRQFYRECDIYGTVDFIFGNAAAIFQNCNIYARK 473 >At3g10720.1 68416.m01290 pectinesterase, putative contains similarity to pectinesterase from Vitis vinifera GI:15081598, Prunus persica SP|Q43062; contains Pfam profile PF01095 pectinesterase Length = 263 Score = 30.7 bits (66), Expect = 1.4 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 7/96 (7%) Frame = +2 Query: 86 WLL*KYSWFLCLLDTWLPMEMLF*NPANLVTCNALAVRQ----SSFWRKPVKGYHNTTYG 253 W S F + + ++ +++ F N A A+A+R SSF+R +GY +T Y Sbjct: 22 WTTYNCSSFAVVGERFMAVDVTFRNTAGPEKHQAVALRNNAEGSSFYRCSFEGYQDTLYV 81 Query: 254 LSIH*FVTSLDVIAPND---AGVVIRFKNLNITGLK 352 S+ F D+ D F+N NI K Sbjct: 82 HSLRQFYRECDIYGTVDFIFGNAAAIFQNCNIYARK 117 >At1g11090.1 68414.m01270 hydrolase, alpha/beta fold family protein similar to monoglyceride lipase from [Homo sapiens] GI:14594904, [Mus musculus] GI:2632162; contains Pfam profile PF00561: hydrolase, alpha/beta fold family Length = 324 Score = 29.5 bits (63), Expect = 3.1 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = +1 Query: 100 VFLVFVFARYVASDGDALLKP-CKLGDMQCLSSATEQFLEKTSKGIPQYDIWPIDPLV 270 + L+ FA + DG L+ P CK+ D +QFL S+ +P + I P + L+ Sbjct: 144 ICLLIQFADPLGFDGAVLVAPMCKISDKVRPKWPVDQFLIMISRFLPTWAIVPTEDLL 201 >At3g05620.1 68416.m00624 pectinesterase family protein contains Pfam profile: PF01095 pectinesterase Length = 543 Score = 28.7 bits (61), Expect = 5.4 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +2 Query: 131 WLPMEMLF*NPANLVTCNALAVR----QSSFWRKPVKGYHNTTYGLSIH*FVTSLDVIAP 298 ++ ++ F N A A+A+R QS+F+R V+GY +T Y S+ F ++ Sbjct: 328 FIAKDITFRNTAGPQNRQAVALRVDSDQSAFYRCSVEGYQDTLYAHSLRQFYRDCEIYGT 387 Query: 299 ND 304 D Sbjct: 388 ID 389 >At1g04620.1 68414.m00456 coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family contains Pfam PF04432: Coenzyme F420 hydrogenase/dehydrogenase, beta domain; similar to Coenzyme F420 hydrogenase beta subunit (SP:Q00391) {Methanobacterium thermoautotrophicum} Length = 462 Score = 28.7 bits (61), Expect = 5.4 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 Query: 277 VIGCNCSKRCGSRDTLQKFKHHGSKEPANI 366 V+G NC G+RD L KF SKEP + Sbjct: 230 VLGTNCVDN-GTRDGLDKFLKAASKEPETV 258 >At4g00740.1 68417.m00101 dehydration-responsive protein-related similar to early-responsive to dehydration stress ERD3 protein [Arabidopsis thaliana] GI:15320410; contains Pfam profile PF03141: Putative methyltransferase Length = 600 Score = 27.9 bits (59), Expect = 9.5 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +1 Query: 130 VASDGDALLKPCKLGDMQCLSSATEQFLEKTSKGIPQYDIW 252 +A DG+ ++ +GD CL S E LE + +P D W Sbjct: 331 IAVDGNTVIWKKPVGD-SCLPSQNEFGLELCDESVPPSDAW 370 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,953,343 Number of Sequences: 28952 Number of extensions: 380243 Number of successful extensions: 790 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 776 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 790 length of database: 12,070,560 effective HSP length: 81 effective length of database: 9,725,448 effective search space used: 2081245872 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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