Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I04
         (908 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1Z8H7 Cluster: CG13214-PA, isoform A; n=5; Eukaryota|R...    38   0.47 
UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces cap...    35   3.3  
UniRef50_Q9NY12 Cluster: H/ACA ribonucleoprotein complex subunit...    34   4.4  
UniRef50_A3ZSP9 Cluster: Probable mu-protocadherin-putative cell...    34   5.8  
UniRef50_Q9Y2W2 Cluster: WW domain-binding protein 11; n=42; Eut...    33   7.6  

>UniRef50_A1Z8H7 Cluster: CG13214-PA, isoform A; n=5; Eukaryota|Rep:
           CG13214-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 610

 Score = 37.5 bits (83), Expect = 0.47
 Identities = 33/111 (29%), Positives = 37/111 (33%)
 Frame = -1

Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXGKXXPHPXLFXXXX 726
           G  GGA  G  RGG PG   +  GG      G     G   GGG  G   P         
Sbjct: 313 GGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGGGYGGGGGGGRGGGGAPGAPGSPGGG 372

Query: 725 PFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKG 573
            F G      F G   R  G P  P   G   +      G G +  G G+G
Sbjct: 373 GFGGQGGGGGFGGGGGR-GGAPGAPGSPGGGGYGGQGGAGGG-YGGGGGRG 421



 Score = 35.1 bits (77), Expect = 2.5
 Identities = 38/125 (30%), Positives = 40/125 (32%), Gaps = 2/125 (1%)
 Frame = -1

Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXF-XGXFRGGGAXGKXXP-HPXLFXX 732
           G  GG   G  RGG PG   +  GG      GG  F  G  RGG       P  P     
Sbjct: 474 GGGGGYGGGAGRGGAPGAPGSPGGGGFGGQGGGGGFGAGGGRGGAGGAPGGPGSPGGPGY 533

Query: 731 XXPFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKGXQKPNPF 552
                GP       G  P   G  Y PP  G      P   G G    G G     P P 
Sbjct: 534 GGGAGGPGGAGGRPGG-PGLPGNQYVPPAAGGGAPGSPGRPGSG-GVPGTGSQYIPPAPG 591

Query: 551 SRGVG 537
           + G G
Sbjct: 592 APGGG 596



 Score = 34.3 bits (75), Expect = 4.4
 Identities = 37/126 (29%), Positives = 41/126 (32%), Gaps = 1/126 (0%)
 Frame = -1

Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXG-GXXFXGXFRGGGAXGKXXPHPXLFXXX 729
           G  GG   G  RGG PG   +  GG      G G  + G    GG      P        
Sbjct: 378 GGGGGFGGGGGRGGAPGAPGSPGGGGYGGQGGAGGGYGGGGGRGGGGAPGAPGAPGSPGG 437

Query: 728 XPFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKGXQKPNPFS 549
             F G      F G   R  G P  P   G   F      G G +  G G+G     P S
Sbjct: 438 GGFGGQGGGGGFGGGGGR-GGAPGAPGSPGGGGFGGQG--GGGGYGGGAGRGGAPGAPGS 494

Query: 548 RGVGXF 531
            G G F
Sbjct: 495 PGGGGF 500


>UniRef50_A6RGJ8 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 757

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 19/51 (37%), Positives = 19/51 (37%)
 Frame = -1

Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXGKXXP 753
           G  GG   G   GG PG      GG  P   GG       RGGG  G   P
Sbjct: 399 GGGGGGPPGGGGGGPPGSGGGGGGGGGPPEGGGGSDGAPGRGGGGGGGGGP 449


>UniRef50_Q9NY12 Cluster: H/ACA ribonucleoprotein complex subunit 1;
           n=28; Eukaryota|Rep: H/ACA ribonucleoprotein complex
           subunit 1 - Homo sapiens (Human)
          Length = 217

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 18/44 (40%), Positives = 18/44 (40%)
 Frame = -1

Query: 896 GGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765
           GG R G  RGG  G F            GG    G FRGGG  G
Sbjct: 5   GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGG 48


>UniRef50_A3ZSP9 Cluster: Probable mu-protocadherin-putative
           cell-suface protein; n=1; Blastopirellula marina DSM
           3645|Rep: Probable mu-protocadherin-putative cell-suface
           protein - Blastopirellula marina DSM 3645
          Length = 436

 Score = 33.9 bits (74), Expect = 5.8
 Identities = 20/47 (42%), Positives = 21/47 (44%)
 Frame = -1

Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765
           G  GGAR G  RGG  G    + GG  P   GG    G F GG   G
Sbjct: 25  GPRGGARGGA-RGGAGGGARPAGGGNRPSPGGGNFGGGNFNGGQNLG 70


>UniRef50_Q9Y2W2 Cluster: WW domain-binding protein 11; n=42;
           Euteleostomi|Rep: WW domain-binding protein 11 - Homo
           sapiens (Human)
          Length = 641

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 19/59 (32%), Positives = 21/59 (35%)
 Frame = +1

Query: 661 GFPXNRGNXPEKKXXXKGPXKGXKXXKRXGWGXXFPXAPPPLKXPXKXXPPXXXGXXPP 837
           G P  RG  P  +    GP  G       G     P  PPP   P +  PP   G  PP
Sbjct: 446 GMPGLRGPLP--RLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPP 502


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,626,597
Number of Sequences: 1657284
Number of extensions: 5158550
Number of successful extensions: 9635
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9311
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)