Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I04
         (908 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21722| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.74 
SB_48113| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.97 
SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.3  
SB_29737| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.3  
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.3  
SB_17601| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.3  
SB_8730| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   1.3  
SB_466| Best HMM Match : No HMM Matches (HMM E-Value=.)                31   1.3  

>SB_21722| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 284

 Score = 31.9 bits (69), Expect = 0.74
 Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
 Frame = -3

Query: 789 FQG-GGGXXEXXPPPXPFXGFXXFXGAFXXXFFFXXIPPIXXETXFPPLXGVKPLSPXXX 613
           F+G GGG     P   PF G   F G      F    P I   T  PPL  + PL+    
Sbjct: 20  FRGSGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRY-PLILWITVLPPLSELIPLAAAER 78

Query: 612 PGA 604
           P A
Sbjct: 79  PSA 81


>SB_48113| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 466

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 21/62 (33%), Positives = 25/62 (40%)
 Frame = -3

Query: 789 FQGGGGXXEXXPPPXPFXGFXXFXGAFXXXFFFXXIPPIXXETXFPPLXGVKPLSPXXXP 610
           F+GGG   +  P   PF G   F G      F    P I   T  PPL  + PL+    P
Sbjct: 404 FEGGGAYGKT-PATRPFYGSWPFAGLLLTCSFLRY-PLILWITVLPPLSELIPLAAAERP 461

Query: 609 GA 604
            A
Sbjct: 462 SA 463


>SB_33595| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 901

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 20/59 (33%), Positives = 22/59 (37%)
 Frame = -3

Query: 780 GGGXXEXXPPPXPFXGFXXFXGAFXXXFFFXXIPPIXXETXFPPLXGVKPLSPXXXPGA 604
           GGG     P   PF G   F G      F    P I   T  PPL  + PL+    P A
Sbjct: 759 GGGAYGKTPATRPFYGSWPFAGLLLTCSFLRY-PLILWITVLPPLSELIPLAAAERPSA 816


>SB_29737| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 128

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 20/59 (33%), Positives = 22/59 (37%)
 Frame = -3

Query: 780 GGGXXEXXPPPXPFXGFXXFXGAFXXXFFFXXIPPIXXETXFPPLXGVKPLSPXXXPGA 604
           GGG     P   PF G   F G      F    P I   T  PPL  + PL+    P A
Sbjct: 1   GGGAYGKTPATRPFYGSWPFAGLLLTCSFLRY-PLILWITVLPPLSELIPLAAAERPSA 58


>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1170

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/49 (36%), Positives = 18/49 (36%)
 Frame = -1

Query: 896 GGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXGKXXPH 750
           GGA  G   GG  G    S GG      GG  F     GGG  G    H
Sbjct: 419 GGAFGGSSGGGFGGSSGGSFGGSSGGSFGGSGFGSKSSGGGGGGSRTCH 467


>SB_17601| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 649

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 20/59 (33%), Positives = 22/59 (37%)
 Frame = -3

Query: 780 GGGXXEXXPPPXPFXGFXXFXGAFXXXFFFXXIPPIXXETXFPPLXGVKPLSPXXXPGA 604
           GGG     P   PF G   F G      F    P I   T  PPL  + PL+    P A
Sbjct: 555 GGGAYGKTPATRPFYGSWPFAGLLLTCSFLRY-PLILWITVLPPLSELIPLAAAERPSA 612


>SB_8730| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 83

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 20/59 (33%), Positives = 22/59 (37%)
 Frame = -3

Query: 780 GGGXXEXXPPPXPFXGFXXFXGAFXXXFFFXXIPPIXXETXFPPLXGVKPLSPXXXPGA 604
           GGG     P   PF G   F G      F    P I   T  PPL  + PL+    P A
Sbjct: 23  GGGAYGKTPATRPFYGSWPFAGLLLTCSFLRY-PLILWITVLPPLSELIPLAAAERPSA 80


>SB_466| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 139

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 20/59 (33%), Positives = 22/59 (37%)
 Frame = -3

Query: 780 GGGXXEXXPPPXPFXGFXXFXGAFXXXFFFXXIPPIXXETXFPPLXGVKPLSPXXXPGA 604
           GGG     P   PF G   F G      F    P I   T  PPL  + PL+    P A
Sbjct: 1   GGGAYGKTPATRPFYGSWPFAGLLLTCSFLRY-PLILWITVLPPLSELIPLAAAERPSA 58


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,352,474
Number of Sequences: 59808
Number of extensions: 143861
Number of successful extensions: 339
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2621784220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)