Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I04
         (908 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   0.79 
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   3.2  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   5.5  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 27.1 bits (57), Expect = 0.79
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = +1

Query: 742 RXGWGXXFPXAPPPLKXPXKXXPPXXXGXXPP 837
           R G     P APP L  P    PP   G  PP
Sbjct: 88  RPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPP 119



 Score = 25.4 bits (53), Expect = 2.4
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 775 PPPLKXPXKXXPPXXXGXXPP 837
           PPP+  P    PP   G  PP
Sbjct: 118 PPPMMVPTMGMPPMGLGMRPP 138


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 784 GGGGXXGKXPPTXXFXXXXXLXGGLLXXI 698
           G GG  GK PP         L GG++  I
Sbjct: 400 GDGGSDGKKPPNNPLEKTNRLWGGVINDI 428


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 15/44 (34%), Positives = 15/44 (34%)
 Frame = -1

Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGG 774
           G  GG   G   GG  G      G       GG    G F GGG
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGG 98


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,635
Number of Sequences: 2352
Number of extensions: 4335
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)