Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_I04
(908 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein famil... 34 0.62
AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein. 34 0.62
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 33 1.1
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 33 1.1
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 33 1.1
AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4, tr... 33 1.1
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 33 1.1
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 33 1.1
AY780787-1|AAV98357.1| 199|Homo sapiens nucleolar protein famil... 32 2.5
>BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein family
A, member 1 (H/ACA small nucleolar RNPs) protein.
Length = 217
Score = 34.3 bits (75), Expect = 0.62
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -1
Query: 896 GGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765
GG R G RGG G F GG G FRGGG G
Sbjct: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGG 48
>AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein.
Length = 217
Score = 34.3 bits (75), Expect = 0.62
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -1
Query: 896 GGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765
GG R G RGG G F GG G FRGGG G
Sbjct: 5 GGGRGGFNRGGGGGGFNRGGSSNHFRGGGGGGGGGNFRGGGRGG 48
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 33.5 bits (73), Expect = 1.1
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = +1
Query: 661 GFPXNRGNXPEKKXXXKGPXKGXKXXKRXGWGXXFPXAPPPLKXPXKXXPPXXXGXXPP 837
G P RG P + GP G G P PPP P + PP G PP
Sbjct: 446 GMPGLRGPLP--RLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPP 502
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 33.5 bits (73), Expect = 1.1
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = +1
Query: 661 GFPXNRGNXPEKKXXXKGPXKGXKXXKRXGWGXXFPXAPPPLKXPXKXXPPXXXGXXPP 837
G P RG P + GP G G P PPP P + PP G PP
Sbjct: 205 GMPGLRGPLP--RLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPP 261
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 33.5 bits (73), Expect = 1.1
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = +1
Query: 661 GFPXNRGNXPEKKXXXKGPXKGXKXXKRXGWGXXFPXAPPPLKXPXKXXPPXXXGXXPP 837
G P RG P + GP G G P PPP P + PP G PP
Sbjct: 446 GMPGLRGPLP--RLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPP 502
>AL445209-3|CAI15184.1| 419|Homo sapiens POU domain, class 4,
transcription factor 1 protein.
Length = 419
Score = 33.5 bits (73), Expect = 1.1
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 896 GGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGG-AXGKXXPHPXL 741
GGA G GG PG GG GG G GGG G PHP +
Sbjct: 141 GGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPGGGLLGGSAHPHPHM 193
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 33.5 bits (73), Expect = 1.1
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = +1
Query: 661 GFPXNRGNXPEKKXXXKGPXKGXKXXKRXGWGXXFPXAPPPLKXPXKXXPPXXXGXXPP 837
G P RG P + GP G G P PPP P + PP G PP
Sbjct: 446 GMPGLRGPLP--RLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPP 502
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 33.5 bits (73), Expect = 1.1
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = +1
Query: 661 GFPXNRGNXPEKKXXXKGPXKGXKXXKRXGWGXXFPXAPPPLKXPXKXXPPXXXGXXPP 837
G P RG P + GP G G P PPP P + PP G PP
Sbjct: 446 GMPGLRGPLP--RLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPP 502
>AY780787-1|AAV98357.1| 199|Homo sapiens nucleolar protein family A
member 1 protein.
Length = 199
Score = 32.3 bits (70), Expect = 2.5
Identities = 20/45 (44%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -1
Query: 896 GGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXG-XFRGGGAXG 765
GG R G RGG G F N G GG G FRGGG G
Sbjct: 5 GGGRGGFNRGGGGGGF-NRGGSSNHFRGGGGGGGGDNFRGGGRGG 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,369,059
Number of Sequences: 237096
Number of extensions: 1098062
Number of successful extensions: 2026
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1985
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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