BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_I04 (908 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p pro... 38 0.025 AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-P... 38 0.025 BT028801-1|ABI34182.1| 286|Drosophila melanogaster LP21747p pro... 31 2.2 BT004476-1|AAO42640.1| 286|Drosophila melanogaster LP07342p pro... 31 2.2 AJ271041-1|CAB66004.1| 286|Drosophila melanogaster Gly-rich pro... 31 2.2 AE014297-4048|AAF56656.1| 286|Drosophila melanogaster CG5812-PA... 31 2.2 X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin pr... 30 5.0 AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA... 30 5.0 >BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p protein. Length = 538 Score = 37.5 bits (83), Expect = 0.025 Identities = 33/111 (29%), Positives = 37/111 (33%) Frame = -1 Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXGKXXPHPXLFXXXX 726 G GGA G RGG PG + GG G G GGG G P Sbjct: 241 GGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGGGYGGGGGGGRGGGGAPGAPGSPGGG 300 Query: 725 PFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKG 573 F G F G R G P P G + G G + G G+G Sbjct: 301 GFGGQGGGGGFGGGGGR-GGAPGAPGSPGGGGYGGQGGAGGG-YGGGGGRG 349 Score = 35.1 bits (77), Expect = 0.13 Identities = 38/125 (30%), Positives = 40/125 (32%), Gaps = 2/125 (1%) Frame = -1 Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXF-XGXFRGGGAXGKXXP-HPXLFXX 732 G GG G RGG PG + GG GG F G RGG P P Sbjct: 402 GGGGGYGGGAGRGGAPGAPGSPGGGGFGGQGGGGGFGAGGGRGGAGGAPGGPGSPGGPGY 461 Query: 731 XXPFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKGXQKPNPF 552 GP G P G Y PP G P G G G G P P Sbjct: 462 GGGAGGPGGAGGRPGG-PGLPGNQYVPPAAGGGAPGSPGRPGSG-GVPGTGSQYIPPAPG 519 Query: 551 SRGVG 537 + G G Sbjct: 520 APGGG 524 Score = 34.3 bits (75), Expect = 0.23 Identities = 37/126 (29%), Positives = 41/126 (32%), Gaps = 1/126 (0%) Frame = -1 Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXG-GXXFXGXFRGGGAXGKXXPHPXLFXXX 729 G GG G RGG PG + GG G G + G GG P Sbjct: 306 GGGGGFGGGGGRGGAPGAPGSPGGGGYGGQGGAGGGYGGGGGRGGGGAPGAPGAPGSPGG 365 Query: 728 XPFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKGXQKPNPFS 549 F G F G R G P P G F G G + G G+G P S Sbjct: 366 GGFGGQGGGGGFGGGGGR-GGAPGAPGSPGGGGFGGQG--GGGGYGGGAGRGGAPGAPGS 422 Query: 548 RGVGXF 531 G G F Sbjct: 423 PGGGGF 428 Score = 30.3 bits (65), Expect = 3.8 Identities = 36/129 (27%), Positives = 41/129 (31%), Gaps = 4/129 (3%) Frame = -1 Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXF----XGXFRGGGAXGKXXPHPXLF 738 G G+ G RGG PG GG GG + G RGG G P F Sbjct: 208 GGGYGSGGGSGRGGAPGGPGAPGGGGFGGQGGGGGYGGAGGGAGRGGSPGGPGSPGGGGF 267 Query: 737 XXXXPFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKGXQKPN 558 G + G G P P G F G G F G G+G Sbjct: 268 GGQGGAGGGYGGG--GGGGRGGGGAPGAPGSPGGGGFGGQG--GGGGFGGGGGRGGAPGA 323 Query: 557 PFSRGVGXF 531 P S G G + Sbjct: 324 PGSPGGGGY 332 Score = 29.1 bits (62), Expect = 8.8 Identities = 33/108 (30%), Positives = 36/108 (33%) Frame = -1 Query: 896 GGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXGKXXPHPXLFXXXXPFX 717 GG R G G PG + GG GG G F GGG G P F Sbjct: 345 GGGRGGGGAPGAPGAPGSPGGGGFGGQGGG----GGFGGGGGRGGAPGAPG-SPGGGGFG 399 Query: 716 GPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKG 573 G + G R G P P G F G G F G G+G Sbjct: 400 GQGGGGGYGGGAGR-GGAPGAPGSPGGGGFGGQG--GGGGFGAGGGRG 444 >AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-PA, isoform A protein. Length = 610 Score = 37.5 bits (83), Expect = 0.025 Identities = 33/111 (29%), Positives = 37/111 (33%) Frame = -1 Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXGKXXPHPXLFXXXX 726 G GGA G RGG PG + GG G G GGG G P Sbjct: 313 GGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGGGYGGGGGGGRGGGGAPGAPGSPGGG 372 Query: 725 PFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKG 573 F G F G R G P P G + G G + G G+G Sbjct: 373 GFGGQGGGGGFGGGGGR-GGAPGAPGSPGGGGYGGQGGAGGG-YGGGGGRG 421 Score = 35.1 bits (77), Expect = 0.13 Identities = 38/125 (30%), Positives = 40/125 (32%), Gaps = 2/125 (1%) Frame = -1 Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXF-XGXFRGGGAXGKXXP-HPXLFXX 732 G GG G RGG PG + GG GG F G RGG P P Sbjct: 474 GGGGGYGGGAGRGGAPGAPGSPGGGGFGGQGGGGGFGAGGGRGGAGGAPGGPGSPGGPGY 533 Query: 731 XXPFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKGXQKPNPF 552 GP G P G Y PP G P G G G G P P Sbjct: 534 GGGAGGPGGAGGRPGG-PGLPGNQYVPPAAGGGAPGSPGRPGSG-GVPGTGSQYIPPAPG 591 Query: 551 SRGVG 537 + G G Sbjct: 592 APGGG 596 Score = 34.3 bits (75), Expect = 0.23 Identities = 37/126 (29%), Positives = 41/126 (32%), Gaps = 1/126 (0%) Frame = -1 Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXG-GXXFXGXFRGGGAXGKXXPHPXLFXXX 729 G GG G RGG PG + GG G G + G GG P Sbjct: 378 GGGGGFGGGGGRGGAPGAPGSPGGGGYGGQGGAGGGYGGGGGRGGGGAPGAPGAPGSPGG 437 Query: 728 XPFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKGXQKPNPFS 549 F G F G R G P P G F G G + G G+G P S Sbjct: 438 GGFGGQGGGGGFGGGGGR-GGAPGAPGSPGGGGFGGQG--GGGGYGGGAGRGGAPGAPGS 494 Query: 548 RGVGXF 531 G G F Sbjct: 495 PGGGGF 500 Score = 30.3 bits (65), Expect = 3.8 Identities = 36/129 (27%), Positives = 41/129 (31%), Gaps = 4/129 (3%) Frame = -1 Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXF----XGXFRGGGAXGKXXPHPXLF 738 G G+ G RGG PG GG GG + G RGG G P F Sbjct: 280 GGGYGSGGGSGRGGAPGGPGAPGGGGFGGQGGGGGYGGAGGGAGRGGSPGGPGSPGGGGF 339 Query: 737 XXXXPFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKGXQKPN 558 G + G G P P G F G G F G G+G Sbjct: 340 GGQGGAGGGYGGG--GGGGRGGGGAPGAPGSPGGGGFGGQG--GGGGFGGGGGRGGAPGA 395 Query: 557 PFSRGVGXF 531 P S G G + Sbjct: 396 PGSPGGGGY 404 Score = 29.1 bits (62), Expect = 8.8 Identities = 33/108 (30%), Positives = 36/108 (33%) Frame = -1 Query: 896 GGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXGKXXPHPXLFXXXXPFX 717 GG R G G PG + GG GG G F GGG G P F Sbjct: 417 GGGRGGGGAPGAPGAPGSPGGGGFGGQGGG----GGFGGGGGRGGAPGAPG-SPGGGGFG 471 Query: 716 GPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKG 573 G + G R G P P G F G G F G G+G Sbjct: 472 GQGGGGGYGGGAGR-GGAPGAPGSPGGGGFGGQG--GGGGFGAGGGRG 516 >BT028801-1|ABI34182.1| 286|Drosophila melanogaster LP21747p protein. Length = 286 Score = 31.1 bits (67), Expect = 2.2 Identities = 17/47 (36%), Positives = 17/47 (36%) Frame = -1 Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765 G GG G GG G F GG GG G F GG G Sbjct: 34 GGSGGGLGGGFGGGSSGGFGGGIGGGFGGGFGGGSGGGGFSSGGGGG 80 >BT004476-1|AAO42640.1| 286|Drosophila melanogaster LP07342p protein. Length = 286 Score = 31.1 bits (67), Expect = 2.2 Identities = 17/47 (36%), Positives = 17/47 (36%) Frame = -1 Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765 G GG G GG G F GG GG G F GG G Sbjct: 34 GGSGGGLGGGFGGGSSGGFGGGIGGGFGGGFGGGSGGGGFSSGGGGG 80 >AJ271041-1|CAB66004.1| 286|Drosophila melanogaster Gly-rich protein protein. Length = 286 Score = 31.1 bits (67), Expect = 2.2 Identities = 17/47 (36%), Positives = 17/47 (36%) Frame = -1 Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765 G GG G GG G F GG GG G F GG G Sbjct: 34 GGSGGGLGGGFGGGSSGGFGGGIGGGFGGGFGGGSGGGGFSSGGGGG 80 >AE014297-4048|AAF56656.1| 286|Drosophila melanogaster CG5812-PA protein. Length = 286 Score = 31.1 bits (67), Expect = 2.2 Identities = 17/47 (36%), Positives = 17/47 (36%) Frame = -1 Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765 G GG G GG G F GG GG G F GG G Sbjct: 34 GGSGGGLGGGFGGGSSGGFGGGIGGGFGGGFGGGSGGGGFSSGGGGG 80 >X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin protein. Length = 147 Score = 29.9 bits (64), Expect = 5.0 Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Frame = -1 Query: 905 GXXGGARXGVXRGGXPGDF*NSXGG-XXPXXXGGXXFXGXFRGGGAXG 765 G GG R G RGG G + GG GG G RGGG G Sbjct: 59 GGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRG 106 >AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA protein. Length = 344 Score = 29.9 bits (64), Expect = 5.0 Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%) Frame = -1 Query: 905 GXXGGARXGVXRGGXPGDF*NSXGG-XXPXXXGGXXFXGXFRGGGAXG 765 G GG R G RGG G + GG GG G RGGG G Sbjct: 52 GGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRG 99 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,351,368 Number of Sequences: 53049 Number of extensions: 307493 Number of successful extensions: 802 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 455 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 756 length of database: 24,988,368 effective HSP length: 85 effective length of database: 20,479,203 effective search space used: 4443987051 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -