BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_I04
(908 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p pro... 38 0.025
AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-P... 38 0.025
BT028801-1|ABI34182.1| 286|Drosophila melanogaster LP21747p pro... 31 2.2
BT004476-1|AAO42640.1| 286|Drosophila melanogaster LP07342p pro... 31 2.2
AJ271041-1|CAB66004.1| 286|Drosophila melanogaster Gly-rich pro... 31 2.2
AE014297-4048|AAF56656.1| 286|Drosophila melanogaster CG5812-PA... 31 2.2
X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin pr... 30 5.0
AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA... 30 5.0
>BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p
protein.
Length = 538
Score = 37.5 bits (83), Expect = 0.025
Identities = 33/111 (29%), Positives = 37/111 (33%)
Frame = -1
Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXGKXXPHPXLFXXXX 726
G GGA G RGG PG + GG G G GGG G P
Sbjct: 241 GGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGGGYGGGGGGGRGGGGAPGAPGSPGGG 300
Query: 725 PFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKG 573
F G F G R G P P G + G G + G G+G
Sbjct: 301 GFGGQGGGGGFGGGGGR-GGAPGAPGSPGGGGYGGQGGAGGG-YGGGGGRG 349
Score = 35.1 bits (77), Expect = 0.13
Identities = 38/125 (30%), Positives = 40/125 (32%), Gaps = 2/125 (1%)
Frame = -1
Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXF-XGXFRGGGAXGKXXP-HPXLFXX 732
G GG G RGG PG + GG GG F G RGG P P
Sbjct: 402 GGGGGYGGGAGRGGAPGAPGSPGGGGFGGQGGGGGFGAGGGRGGAGGAPGGPGSPGGPGY 461
Query: 731 XXPFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKGXQKPNPF 552
GP G P G Y PP G P G G G G P P
Sbjct: 462 GGGAGGPGGAGGRPGG-PGLPGNQYVPPAAGGGAPGSPGRPGSG-GVPGTGSQYIPPAPG 519
Query: 551 SRGVG 537
+ G G
Sbjct: 520 APGGG 524
Score = 34.3 bits (75), Expect = 0.23
Identities = 37/126 (29%), Positives = 41/126 (32%), Gaps = 1/126 (0%)
Frame = -1
Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXG-GXXFXGXFRGGGAXGKXXPHPXLFXXX 729
G GG G RGG PG + GG G G + G GG P
Sbjct: 306 GGGGGFGGGGGRGGAPGAPGSPGGGGYGGQGGAGGGYGGGGGRGGGGAPGAPGAPGSPGG 365
Query: 728 XPFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKGXQKPNPFS 549
F G F G R G P P G F G G + G G+G P S
Sbjct: 366 GGFGGQGGGGGFGGGGGR-GGAPGAPGSPGGGGFGGQG--GGGGYGGGAGRGGAPGAPGS 422
Query: 548 RGVGXF 531
G G F
Sbjct: 423 PGGGGF 428
Score = 30.3 bits (65), Expect = 3.8
Identities = 36/129 (27%), Positives = 41/129 (31%), Gaps = 4/129 (3%)
Frame = -1
Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXF----XGXFRGGGAXGKXXPHPXLF 738
G G+ G RGG PG GG GG + G RGG G P F
Sbjct: 208 GGGYGSGGGSGRGGAPGGPGAPGGGGFGGQGGGGGYGGAGGGAGRGGSPGGPGSPGGGGF 267
Query: 737 XXXXPFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKGXQKPN 558
G + G G P P G F G G F G G+G
Sbjct: 268 GGQGGAGGGYGGG--GGGGRGGGGAPGAPGSPGGGGFGGQG--GGGGFGGGGGRGGAPGA 323
Query: 557 PFSRGVGXF 531
P S G G +
Sbjct: 324 PGSPGGGGY 332
Score = 29.1 bits (62), Expect = 8.8
Identities = 33/108 (30%), Positives = 36/108 (33%)
Frame = -1
Query: 896 GGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXGKXXPHPXLFXXXXPFX 717
GG R G G PG + GG GG G F GGG G P F
Sbjct: 345 GGGRGGGGAPGAPGAPGSPGGGGFGGQGGG----GGFGGGGGRGGAPGAPG-SPGGGGFG 399
Query: 716 GPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKG 573
G + G R G P P G F G G F G G+G
Sbjct: 400 GQGGGGGYGGGAGR-GGAPGAPGSPGGGGFGGQG--GGGGFGAGGGRG 444
>AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-PA,
isoform A protein.
Length = 610
Score = 37.5 bits (83), Expect = 0.025
Identities = 33/111 (29%), Positives = 37/111 (33%)
Frame = -1
Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXGKXXPHPXLFXXXX 726
G GGA G RGG PG + GG G G GGG G P
Sbjct: 313 GGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGGGYGGGGGGGRGGGGAPGAPGSPGGG 372
Query: 725 PFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKG 573
F G F G R G P P G + G G + G G+G
Sbjct: 373 GFGGQGGGGGFGGGGGR-GGAPGAPGSPGGGGYGGQGGAGGG-YGGGGGRG 421
Score = 35.1 bits (77), Expect = 0.13
Identities = 38/125 (30%), Positives = 40/125 (32%), Gaps = 2/125 (1%)
Frame = -1
Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXF-XGXFRGGGAXGKXXP-HPXLFXX 732
G GG G RGG PG + GG GG F G RGG P P
Sbjct: 474 GGGGGYGGGAGRGGAPGAPGSPGGGGFGGQGGGGGFGAGGGRGGAGGAPGGPGSPGGPGY 533
Query: 731 XXPFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKGXQKPNPF 552
GP G P G Y PP G P G G G G P P
Sbjct: 534 GGGAGGPGGAGGRPGG-PGLPGNQYVPPAAGGGAPGSPGRPGSG-GVPGTGSQYIPPAPG 591
Query: 551 SRGVG 537
+ G G
Sbjct: 592 APGGG 596
Score = 34.3 bits (75), Expect = 0.23
Identities = 37/126 (29%), Positives = 41/126 (32%), Gaps = 1/126 (0%)
Frame = -1
Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXG-GXXFXGXFRGGGAXGKXXPHPXLFXXX 729
G GG G RGG PG + GG G G + G GG P
Sbjct: 378 GGGGGFGGGGGRGGAPGAPGSPGGGGYGGQGGAGGGYGGGGGRGGGGAPGAPGAPGSPGG 437
Query: 728 XPFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKGXQKPNPFS 549
F G F G R G P P G F G G + G G+G P S
Sbjct: 438 GGFGGQGGGGGFGGGGGR-GGAPGAPGSPGGGGFGGQG--GGGGYGGGAGRGGAPGAPGS 494
Query: 548 RGVGXF 531
G G F
Sbjct: 495 PGGGGF 500
Score = 30.3 bits (65), Expect = 3.8
Identities = 36/129 (27%), Positives = 41/129 (31%), Gaps = 4/129 (3%)
Frame = -1
Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXF----XGXFRGGGAXGKXXPHPXLF 738
G G+ G RGG PG GG GG + G RGG G P F
Sbjct: 280 GGGYGSGGGSGRGGAPGGPGAPGGGGFGGQGGGGGYGGAGGGAGRGGSPGGPGSPGGGGF 339
Query: 737 XXXXPFXGPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKGXQKPN 558
G + G G P P G F G G F G G+G
Sbjct: 340 GGQGGAGGGYGGG--GGGGRGGGGAPGAPGSPGGGGFGGQG--GGGGFGGGGGRGGAPGA 395
Query: 557 PFSRGVGXF 531
P S G G +
Sbjct: 396 PGSPGGGGY 404
Score = 29.1 bits (62), Expect = 8.8
Identities = 33/108 (30%), Positives = 36/108 (33%)
Frame = -1
Query: 896 GGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXGKXXPHPXLFXXXXPFX 717
GG R G G PG + GG GG G F GGG G P F
Sbjct: 417 GGGRGGGGAPGAPGAPGSPGGGGFGGQGGG----GGFGGGGGRGGAPGAPG-SPGGGGFG 471
Query: 716 GPFXXXFFSGXFPRFXGKPYFPPWXGXNXFPXPXXRGXGVFXXGXGKG 573
G + G R G P P G F G G F G G+G
Sbjct: 472 GQGGGGGYGGGAGR-GGAPGAPGSPGGGGFGGQG--GGGGFGAGGGRG 516
>BT028801-1|ABI34182.1| 286|Drosophila melanogaster LP21747p
protein.
Length = 286
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765
G GG G GG G F GG GG G F GG G
Sbjct: 34 GGSGGGLGGGFGGGSSGGFGGGIGGGFGGGFGGGSGGGGFSSGGGGG 80
>BT004476-1|AAO42640.1| 286|Drosophila melanogaster LP07342p
protein.
Length = 286
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765
G GG G GG G F GG GG G F GG G
Sbjct: 34 GGSGGGLGGGFGGGSSGGFGGGIGGGFGGGFGGGSGGGGFSSGGGGG 80
>AJ271041-1|CAB66004.1| 286|Drosophila melanogaster Gly-rich
protein protein.
Length = 286
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765
G GG G GG G F GG GG G F GG G
Sbjct: 34 GGSGGGLGGGFGGGSSGGFGGGIGGGFGGGFGGGSGGGGFSSGGGGG 80
>AE014297-4048|AAF56656.1| 286|Drosophila melanogaster CG5812-PA
protein.
Length = 286
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -1
Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765
G GG G GG G F GG GG G F GG G
Sbjct: 34 GGSGGGLGGGFGGGSSGGFGGGIGGGFGGGFGGGSGGGGFSSGGGGG 80
>X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin
protein.
Length = 147
Score = 29.9 bits (64), Expect = 5.0
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 905 GXXGGARXGVXRGGXPGDF*NSXGG-XXPXXXGGXXFXGXFRGGGAXG 765
G GG R G RGG G + GG GG G RGGG G
Sbjct: 59 GGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRG 106
>AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA
protein.
Length = 344
Score = 29.9 bits (64), Expect = 5.0
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = -1
Query: 905 GXXGGARXGVXRGGXPGDF*NSXGG-XXPXXXGGXXFXGXFRGGGAXG 765
G GG R G RGG G + GG GG G RGGG G
Sbjct: 52 GGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRG 99
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,351,368
Number of Sequences: 53049
Number of extensions: 307493
Number of successful extensions: 802
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -