Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_I04
         (908 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    31   1.5  
AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical...    30   2.6  
AF043700-5|AAB97575.2|  573|Caenorhabditis elegans Lipid deplete...    29   4.6  
U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical pr...    29   6.1  

>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 17/47 (36%), Positives = 18/47 (38%)
 Frame = -1

Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765
           G  GG   G   GG  G      GG      GG  + G  RGGG  G
Sbjct: 22  GGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRGG 68



 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/47 (34%), Positives = 18/47 (38%)
 Frame = -1

Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765
           G   G   G  RGG  G +    GG      GG    G + GGG  G
Sbjct: 18  GGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGG 64


>AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical
           protein Y43F8C.20 protein.
          Length = 193

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
 Frame = -1

Query: 905 GXXGGARXGVXRGG-XPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765
           G  GG R G  RGG   G   ++ GG      GG    G  RGGG  G
Sbjct: 130 GGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGG 177


>AF043700-5|AAB97575.2|  573|Caenorhabditis elegans Lipid depleted
           protein 6 protein.
          Length = 573

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 17/43 (39%), Positives = 17/43 (39%)
 Frame = -1

Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGG 777
           G  GG   G  RGG  G F    GG       G    G FRGG
Sbjct: 529 GGFGGRGGGGFRGGDRGGFRGRGGGGGFRGGRGGDRGGGFRGG 571


>U58755-7|AAB00696.1|  136|Caenorhabditis elegans Hypothetical
           protein C34D4.11 protein.
          Length = 136

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/47 (36%), Positives = 17/47 (36%)
 Frame = -1

Query: 905 GXXGGARXGVXRGGXPGDF*NSXGGXXPXXXGGXXFXGXFRGGGAXG 765
           G  GG   G  RGG  G      GG      GG    G   GGG  G
Sbjct: 83  GNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRG 129


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,385,774
Number of Sequences: 27780
Number of extensions: 129804
Number of successful extensions: 371
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)