BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_I02 (907 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 54 7e-06 UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 46 0.002 UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 46 0.002 UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 43 0.012 UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.087 UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 39 0.20 UniRef50_Q2C3D2 Cluster: Chitinase, containing dual catalytic do... 35 2.5 >UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE - Myxococcus xanthus Length = 486 Score = 53.6 bits (123), Expect = 7e-06 Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Frame = +1 Query: 688 CINESANARGEAVCVLGALPLPRSLTRCARSFGXGXRYXL-TQRR*YGYPQNQGIXQ 855 CI + A AR EAV VL ALPL RS TRC RS G G + R YG PQ QG+ Q Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322 >UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; Escherichia coli|Rep: Putative uncharacterized protein - Escherichia coli Length = 147 Score = 45.6 bits (103), Expect = 0.002 Identities = 21/33 (63%), Positives = 23/33 (69%) Frame = +1 Query: 712 RGEAVCVLGALPLPRSLTRCARSFGXGXRYXLT 810 R +C G +PLPRSLTR ARSFG G RY LT Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58 >UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-hemolysin - Aeromonas hydrophila Length = 59 Score = 45.6 bits (103), Expect = 0.002 Identities = 23/30 (76%), Positives = 23/30 (76%) Frame = +3 Query: 777 VVRXXXXVSXHSKAVIRLSXESGDXAGKNM 866 VVR VS HSKAVIRLS ESGD AGKNM Sbjct: 30 VVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59 >UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40 (SV40) Length = 364 Score = 42.7 bits (96), Expect = 0.012 Identities = 18/19 (94%), Positives = 18/19 (94%) Frame = +2 Query: 491 DPDMIRYIDEFGQTTTXMQ 547 DPDMIRYIDEFGQTTT MQ Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364 >UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterobacteriaceae|Rep: Lactose operon repressor - Escherichia coli (strain K12) Length = 360 Score = 39.9 bits (89), Expect = 0.087 Identities = 19/24 (79%), Positives = 21/24 (87%) Frame = -3 Query: 758 ERGSGRAPNTQTASPRALADSLMQ 687 +R + APNTQTASPRALADSLMQ Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348 >UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Magnoliophyta|Rep: Putative reverse transcriptase - Zingiber officinale (Ginger) Length = 49 Score = 38.7 bits (86), Expect = 0.20 Identities = 18/39 (46%), Positives = 24/39 (61%) Frame = +2 Query: 620 QVNNNNCIHFMFQVQGEVWXVFSALMNRPTXGERRFAYW 736 ++ + NC+ + V +ALMNRPT GERRFAYW Sbjct: 3 ELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41 >UniRef50_Q2C3D2 Cluster: Chitinase, containing dual catalytic domains; n=3; Vibrionaceae|Rep: Chitinase, containing dual catalytic domains - Photobacterium sp. SKA34 Length = 399 Score = 35.1 bits (77), Expect = 2.5 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = +2 Query: 140 MKFTVAFALIAMFAIVAVNSQENGGDSPDGEVAPGVDPVKVVD 268 MK+T+ ALIA ++ A NS N D G VA P K+ + Sbjct: 1 MKYTLLAALIAATSLTACNSSSNSSDDYSGYVAQEPKPAKITE 43 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 597,377,673 Number of Sequences: 1657284 Number of extensions: 9471745 Number of successful extensions: 23764 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 22896 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 23742 length of database: 575,637,011 effective HSP length: 100 effective length of database: 409,908,611 effective search space used: 82391630811 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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