Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_I01
(1059 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55248| Best HMM Match : Adeno_E1A (HMM E-Value=7.5) 34 0.22
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 0.92
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 31 1.6
SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.1
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 31 2.1
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 30 2.7
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 30 2.7
SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6) 30 3.6
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.6
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 4.8
SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 29 4.8
SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 29 4.8
SB_53724| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 29 4.8
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 4.8
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53) 29 6.3
SB_45152| Best HMM Match : DUF320 (HMM E-Value=2.9) 29 6.3
SB_11994| Best HMM Match : ERM (HMM E-Value=0.28) 29 6.3
SB_45599| Best HMM Match : GRP (HMM E-Value=0.22) 29 6.3
SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027) 29 6.3
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 6.3
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.3
>SB_55248| Best HMM Match : Adeno_E1A (HMM E-Value=7.5)
Length = 198
Score = 33.9 bits (74), Expect = 0.22
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 364 DGPXATPPXXXPPXPXPPP-XXPTRPXR 444
D P ++PP PP P PPP P RP R
Sbjct: 141 DSPVSSPPRTPPPEPTPPPTPPPLRPLR 168
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 26.2 bits (55), Expect(2) = 0.92
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPP 420
P PP PP P PPP
Sbjct: 104 PPPPPPPPPPPPPPPPP 120
Score = 24.2 bits (50), Expect(2) = 0.92
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 397 PPXPXPPPXXPTRP 438
PP P PPP P P
Sbjct: 138 PPPPPPPPPAPCMP 151
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P+ P
Sbjct: 684 PPPPPPPPPPPPPPPPPPQPSTP 706
Score = 29.1 bits (62), Expect = 6.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP T P
Sbjct: 685 PPPPPPPPPPPPPPPPPQPSTPP 707
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P + PP PP P PPP P P
Sbjct: 1308 PESPPPPPPPPPPPPPPPLPPTP 1330
>SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +1
Query: 364 DGPXATPPXXXPPXPXPPP-XXPTRP 438
D P PP PP P PPP P+RP
Sbjct: 53 DPPPPPPPPPPPPPPPPPPSSSPSRP 78
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P + PP PP P PPP P P
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPP 408
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 398 PPPPPPPPPPPPPPPPPPPPPAP 420
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 399 PPPPPPPPPPPPPPPPPPPPAPP 421
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 855 PPPPAXXPPPXPPRCRXXXXP 917
PPPP PPP PP R P
Sbjct: 420 PPPPPPPPPPPPPALRLACAP 440
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPP 392
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPP 393
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPP 403
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 387 PSPPPPPQPPPPPPPPPPPPPPP 409
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 391 PPPQPPPPPPPPPPPPPPPPPPP 413
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPP 414
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 393 PQPPPPPPPPPPPPPPPPPPPPP 415
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPPP 417
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 396 PPPPPPPPPPPPPPPPPPPPPPP 418
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 401 PPPPPPPPPPPPPPPPPPAPPPP 423
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 402 PPPPPPPPPPPPPPPPPAPPPPP 424
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 406 PPPPPPPPPPPPPAPPPPPPPPP 428
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 408 PPPPPPPPPPPAPPPPPPPPPPP 430
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 855 PPPPAXXPPPXPP 893
PPPPA PPP PP
Sbjct: 415 PPPPAPPPPPPPP 427
Score = 28.7 bits (61), Expect = 8.3
Identities = 17/66 (25%), Positives = 17/66 (25%)
Frame = +3
Query: 858 PPPAXXPPPXPPRCRXXXXPXXXXXXXXXQLSPPTXXXXSXXXHXXXXXXXXXXXXXXXX 1037
PPP PPP PP P Q PP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Query: 1038 PPPPRP 1055
PPPP P
Sbjct: 425 PPPPPP 430
Score = 28.7 bits (61), Expect = 8.3
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 855 PPPPAXXPPPXPP 893
PPPP+ PPP PP
Sbjct: 373 PPPPSPPPPPPPP 385
Score = 28.7 bits (61), Expect = 8.3
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 855 PPPPAXXPPPXPP 893
PPPP+ PPP PP
Sbjct: 384 PPPPSPPPPPQPP 396
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +1
Query: 382 PPXXXPPXPXPPPXXPTRPXRXGXXXXP 465
PP P P PPP PT+P + P
Sbjct: 799 PPGARPTPPPPPPGKPTKPTKPSLPPVP 826
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 349 TXXXXDGPXATPPXXXPPXPXPPPXXPTRP 438
T P PP PP P PPP P P
Sbjct: 457 TEGVGQAPPPPPPPPPPPPPPPPPPPPPPP 486
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPT 432
P PP PP P PPP PT
Sbjct: 475 PPPPPPPPPPPPPFPPPPPPT 495
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPPP 487
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 470 PPPPPPPPPPPPPPPPPPFPPPP 492
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 471 PPPPPPPPPPPPPPPPPFPPPPP 493
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 467 PPPPPPPPPPPPPPPPPPPPPFP 489
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PPP P P
Sbjct: 468 PPPPPPPPPPPPPPPPPPPPFPP 490
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 364 DGPXATPPXXXPPXPXPPPXXPTRPXRXGXXXXP 465
DG PP PP PPP P P G P
Sbjct: 298 DGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAP 331
>SB_9057| Best HMM Match : Nucleoplasmin (HMM E-Value=3.6)
Length = 479
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 855 PPPPAXXPPPXPP 893
PPPPA PPP PP
Sbjct: 427 PPPPAPLPPPPPP 439
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 29.9 bits (64), Expect = 3.6
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 855 PPPPAXXPPPXPP 893
PPPPA PPP PP
Sbjct: 234 PPPPAAAPPPPPP 246
Score = 29.1 bits (62), Expect = 6.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 852 TPPPPAXXPPPXPPRCRXXXXP 917
TPPPPA PP PP P
Sbjct: 224 TPPPPAAPAPPPPPAAAPPPPP 245
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 382 PPXXXPPXPXPPPXXPTRPXR 444
PP PP P PPP P+ P +
Sbjct: 2 PPPPPPPGPPPPPSAPSGPVK 22
>SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 276
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 382 PPXXXPPXPXPPPXXPTRPXRXG 450
PP PP P PPP P P G
Sbjct: 64 PPTLPPPPPPPPPPLPPPPPSGG 86
>SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 500
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 382 PPXXXPPXPXPPPXXPTRPXRXG 450
PP PP P PPP P P G
Sbjct: 288 PPTLPPPPPPPPPPLPPPPPSGG 310
>SB_53724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1005
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 855 PPPPAXXPPPXPPRCRXXXXP 917
PPPP PPP PP+ + P
Sbjct: 360 PPPPIAMPPPAPPKGKAMVKP 380
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -3
Query: 916 GXXXXRQRGGXGGGXXAGGGG 854
G R+RGG GGG GGGG
Sbjct: 92 GGGGRRERGGRGGGGGYGGGG 112
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3
Query: 901 RQRGGXGGGXXAGGGGVXR 845
R+RGG GGG GGGG R
Sbjct: 1000 RRRGGGGGGGGGGGGGGGR 1018
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PP P RP
Sbjct: 207 PPPRPPPSPPPPPPPPSPSPPRP 229
Score = 28.7 bits (61), Expect = 8.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRPXR 444
P PP P P PPP P P R
Sbjct: 215 PPPPPPPPSPSPPRPPPPPPPSPPR 239
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.1 bits (62), Expect = 6.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 846 RXTPPPPAXXPPPXPP 893
R PPPP PPP PP
Sbjct: 865 RRPPPPPPPPPPPPPP 880
Score = 29.1 bits (62), Expect = 6.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 846 RXTPPPPAXXPPPXPP 893
R PPPP PPP PP
Sbjct: 866 RPPPPPPPPPPPPPPP 881
>SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53)
Length = 264
Score = 29.1 bits (62), Expect = 6.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 855 PPPPAXXPPPXPPRCRXXXXP 917
PPPP PPP PP + P
Sbjct: 81 PPPPPPPPPPPPPGAKKPDDP 101
Score = 28.7 bits (61), Expect = 8.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 376 ATPPXXXPPXPXPPPXXPTRP 438
ATPP P P PPP P P
Sbjct: 71 ATPPPLCAPPPPPPPPPPPPP 91
>SB_45152| Best HMM Match : DUF320 (HMM E-Value=2.9)
Length = 293
Score = 29.1 bits (62), Expect = 6.3
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 439 GAW*GXGGGAXGXGVWXGGGSLXVHLXXXG 350
G W G GGG G G + GGGS H G
Sbjct: 233 GVW-GNGGGGGGGGGYSGGGSGNPHYYACG 261
>SB_11994| Best HMM Match : ERM (HMM E-Value=0.28)
Length = 465
Score = 29.1 bits (62), Expect = 6.3
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 855 PPPPAXXPPPXPPRCRXXXXP 917
PPPP PPP PP + P
Sbjct: 282 PPPPPPPPPPPPPGAKKPDDP 302
Score = 28.7 bits (61), Expect = 8.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 376 ATPPXXXPPXPXPPPXXPTRP 438
ATPP P P PPP P P
Sbjct: 272 ATPPPLCAPPPPPPPPPPPPP 292
>SB_45599| Best HMM Match : GRP (HMM E-Value=0.22)
Length = 595
Score = 29.1 bits (62), Expect = 6.3
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 901 RQRGGXGGGXXAGGGG 854
R+RGG GGG GGGG
Sbjct: 511 RRRGGGGGGGGGGGGG 526
>SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027)
Length = 253
Score = 29.1 bits (62), Expect = 6.3
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 901 RQRGGXGGGXXAGGGG 854
R+RGG GGG GGGG
Sbjct: 161 RRRGGGGGGGGGGGGG 176
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.1 bits (62), Expect = 6.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 852 TPPPPAXXPPPXPP 893
+PPPP+ PPP PP
Sbjct: 187 SPPPPSGGPPPPPP 200
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 28.7 bits (61), Expect = 8.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPT 432
P ++P PP P PPP PT
Sbjct: 1167 PPSSPSPPPPPPPPPPPPTPT 1187
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,617,195
Number of Sequences: 59808
Number of extensions: 152737
Number of successful extensions: 3045
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2338
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3189638717
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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