Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_I01
(1059 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 31 1.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.2
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 29 4.2
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 29 5.6
Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical pr... 29 7.4
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 7.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 7.4
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 29 7.4
Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical p... 28 9.8
Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical p... 28 9.8
Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical p... 28 9.8
Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical p... 28 9.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 9.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 9.8
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 9.8
AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal gro... 28 9.8
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 9.8
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 9.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 9.8
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPT 432
P A PP PP P PPP P+
Sbjct: 354 PPAPPPPPPPPPPPPPPQTPS 374
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXP 429
P +PP PP P PPP P
Sbjct: 350 PIISPPAPPPPPPPPPPPPP 369
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 382 PPXXXPPXPXPPPXXPTRP 438
PP PP P PPP P P
Sbjct: 349 PPIISPPAPPPPPPPPPPP 367
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 855 PPPPAXXPPPXPPR 896
PPPP PPP PP+
Sbjct: 358 PPPPPPPPPPPPPQ 371
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXP 429
P ATP PP P PPP P
Sbjct: 504 PIATPSSVPPPPPPPPPPPP 523
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 364 DGPXATPPXXXPPXPXPPPXXPTRPXRXGXXXXPFA 471
DG +PP PP P PP +P G P A
Sbjct: 204 DGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGA 239
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXPTRP 438
P PP PP P PP PT P
Sbjct: 21 PVTAPPGLHPPPPVPPVPVPTLP 43
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 858 PPPAXXPPPXPPR 896
PPPA PPP PPR
Sbjct: 29 PPPARPPPPPPPR 41
>Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical
protein R06C1.3 protein.
Length = 468
Score = 28.7 bits (61), Expect = 7.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPP 420
P A PP PP P PPP
Sbjct: 349 PSAAPPTNIPPPPPPPP 365
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.7 bits (61), Expect = 7.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 855 PPPPAXXPPPXPP 893
PPPP+ PPP PP
Sbjct: 135 PPPPSPPPPPPPP 147
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 7.4
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 858 PPPAXXPPPXPPRCRXXXXPXXXXXXXXXQLSPP 959
PPP PPP PP C P Q PP
Sbjct: 27 PPPC--PPPPPPMCAPPPLPCPPPPICPPQFCPP 58
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.7 bits (61), Expect = 7.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 898 QRGGXGGGXXAGGGG 854
QRGG GGG GGGG
Sbjct: 211 QRGGSGGGGGGGGGG 225
>Z99281-39|CAE45094.2| 665|Caenorhabditis elegans Hypothetical
protein Y57G11C.24e protein.
Length = 665
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 855 PPPPAXXPPPXPP 893
PPPP PPP PP
Sbjct: 469 PPPPVVIPPPPPP 481
>Z99281-38|CAE45095.2| 845|Caenorhabditis elegans Hypothetical
protein Y57G11C.24d protein.
Length = 845
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 855 PPPPAXXPPPXPP 893
PPPP PPP PP
Sbjct: 649 PPPPVVIPPPPPP 661
>Z99281-36|CAB16527.3| 862|Caenorhabditis elegans Hypothetical
protein Y57G11C.24a protein.
Length = 862
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 855 PPPPAXXPPPXPP 893
PPPP PPP PP
Sbjct: 666 PPPPVVIPPPPPP 678
>Z99281-34|CAJ44243.1| 917|Caenorhabditis elegans Hypothetical
protein Y57G11C.24g protein.
Length = 917
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 855 PPPPAXXPPPXPP 893
PPPP PPP PP
Sbjct: 721 PPPPVVIPPPPPP 733
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 855 PPPPAXXPPPXPP 893
PPPP PPP PP
Sbjct: 762 PPPPGGCPPPPPP 774
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 855 PPPPAXXPPPXPP 893
PPPP PPP PP
Sbjct: 762 PPPPGGCPPPPPP 774
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 370 PXATPPXXXPPXPXPPPXXP 429
P PP PP P PPP P
Sbjct: 68 PPICPPPPPPPMPCPPPPPP 87
Score = 28.3 bits (60), Expect = 9.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 855 PPPPAXXPPPXPPRCR 902
PPPP PPP PP R
Sbjct: 75 PPPPMPCPPPPPPMPR 90
>AY611484-1|AAT37523.1| 917|Caenorhabditis elegans epidermal growth
factor receptorpathway substrate 8 splice variant A
protein.
Length = 917
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 855 PPPPAXXPPPXPP 893
PPPP PPP PP
Sbjct: 721 PPPPVVIPPPPPP 733
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 855 PPPPAXXPPPXPPRCRXXXXPXXXXXXXXXQLSPPT 962
PPP PPP PP P QL P T
Sbjct: 102 PPPIPASPPPRPPASEPVGIPLYSEKQHQQQLRPTT 137
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 9.8
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 855 PPPPAXXPPPXPPRCRXXXXPXXXXXXXXXQLSPPT 962
PPP PPP PP P QL P T
Sbjct: 324 PPPIPASPPPRPPASEPVGIPLYSEKQHQQQLRPTT 359
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 855 PPPPAXXPPPXPP 893
PPPP PPP PP
Sbjct: 345 PPPPGGCPPPPPP 357
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,282,492
Number of Sequences: 27780
Number of extensions: 139560
Number of successful extensions: 3042
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2596
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2824804260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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