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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H24
         (942 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0995 + 33377933-33378000,33378099-33378327,33378410-33378451     94   2e-19
05_07_0061 + 27420442-27420506,27420619-27420847,27420968-27421009     91   9e-19
05_07_0069 + 27475072-27475136,27475237-27475465,27475532-274756...    75   1e-13
05_04_0149 - 18441561-18442082,18442723-18442861,18443295-184433...    32   0.58 
07_03_0529 - 19107949-19108152,19108857-19109147,19109817-191099...    29   4.1  
06_01_0267 - 1972988-1973148,1973275-1973403,1973881-1974024,197...    29   4.1  
09_01_0025 - 441528-444284                                             29   5.4  
09_04_0201 + 15543318-15543488,15543956-15544069                       29   7.1  
07_01_0308 + 2203597-2203774,2203886-2204066,2204141-2204282,220...    29   7.1  
12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,398...    28   9.4  
07_03_1061 + 23651404-23651625,23651764-23652954                       28   9.4  

>02_05_0995 + 33377933-33378000,33378099-33378327,33378410-33378451
          Length = 112

 Score = 93.9 bits (223), Expect = 2e-19
 Identities = 46/91 (50%), Positives = 61/91 (67%)
 Frame = +1

Query: 313 NTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGQ 492
           NT+L+++EG   + +  +Y GK   YVY+AK ++   GG     T  R IWGKVTRPHG 
Sbjct: 31  NTSLVQIEGVNTKEEVAWYCGKRMAYVYKAKTKS---GG-----TNYRCIWGKVTRPHGN 82

Query: 493 TLGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 585
           + G VRAKFKSNLP  +MG ++RV +YPS I
Sbjct: 83  S-GVVRAKFKSNLPPASMGRKVRVFMYPSSI 112


>05_07_0061 + 27420442-27420506,27420619-27420847,27420968-27421009
          Length = 111

 Score = 91.5 bits (217), Expect = 9e-19
 Identities = 44/91 (48%), Positives = 61/91 (67%)
 Frame = +1

Query: 313 NTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGQ 492
           NT+LL++EG   + +  +YAGK   YVY+AK ++          + +R IWGKVTRPHG 
Sbjct: 30  NTSLLQIEGVNTKEEVGWYAGKRIAYVYKAKTKS--------NDSTIRCIWGKVTRPHGN 81

Query: 493 TLGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 585
           + G VRAKF+SNLP  +MG ++RV +YPS I
Sbjct: 82  S-GVVRAKFRSNLPPTSMGKKVRVFMYPSSI 111


>05_07_0069 +
           27475072-27475136,27475237-27475465,27475532-27475630,
           27476172-27476287,27476670-27476757
          Length = 198

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 37/78 (47%), Positives = 51/78 (65%)
 Frame = +1

Query: 313 NTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGQ 492
           NT+LL++EG   + +  +YAGK   YVY+AK ++          + +R IWGKVTRPHG 
Sbjct: 30  NTSLLQIEGVNTKEEVGWYAGKRIAYVYKAKTKS--------NDSTIRCIWGKVTRPHGN 81

Query: 493 TLGSVRAKFKSNLPAQAM 546
           + G VRAKF+SNLP  +M
Sbjct: 82  S-GVVRAKFRSNLPPTSM 98


>05_04_0149 - 18441561-18442082,18442723-18442861,18443295-18443352,
            18443630-18443664,18444528-18444886,18445304-18445450,
            18445849-18447954,18448300-18448494,18448629-18448709,
            18448758-18448874,18449281-18449370,18449466-18449552,
            18450293-18450315,18450675-18450804
          Length = 1362

 Score = 32.3 bits (70), Expect = 0.58
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +1

Query: 412  TPIPGGPRG-KKTKLRAIWGKVTRPHGQTLGSVRAKFKSNLPAQAMGHRIR 561
            T +PGG R  K+ + R +  ++  P  +T GSV A+ K N   + +GH +R
Sbjct: 1097 TALPGGTRDLKRVRFRNL--RLCPPFLETAGSVSARHKQNNGGKRIGHGLR 1145


>07_03_0529 -
           19107949-19108152,19108857-19109147,19109817-19109939,
           19110019-19110306
          Length = 301

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -1

Query: 579 GRIQHHSYSVSHSLGREVRLELGSDTAQSLPMW 481
           GR+ HHS+ VS  L R VRLE    T + L  W
Sbjct: 124 GRVLHHSFPVSLFLPRNVRLE--HKTLKLLKYW 154


>06_01_0267 -
           1972988-1973148,1973275-1973403,1973881-1974024,
           1974368-1974493,1974595-1974720,1975149-1975241,
           1975465-1975606,1976747-1976878,1976943-1977080,
           1977431-1977523,1978186-1978389,1978568-1978656,
           1978839-1978988,1979088-1979253,1979355-1979576,
           1979687-1979872,1980289-1980411,1980511-1980611,
           1982005-1982155
          Length = 891

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 118 WRLXAQTPSKLXAPKSKSGPRAGSXQLLVEPTKVLRKASK 237
           W++  Q+P KL      +    G  Q L++  KVLR++++
Sbjct: 485 WKIHQQSPKKLIKETEPTSSEVGEVQNLLQNEKVLRQSAE 524


>09_01_0025 - 441528-444284
          Length = 918

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -3

Query: 382 NACQHKRLHHYGLLLLQP*GERCFSCWLRRPRLYPVNTALCVQPCRGGALMLCE-GP 215
           +AC  K LH   L+LL      CF    RR  +  V TA   +   GGA + C+ GP
Sbjct: 266 HACWSKHLHSDCLVLLDNAHLCCFDLHQRRGSVLRVGTATATE---GGACLSCDYGP 319


>09_04_0201 + 15543318-15543488,15543956-15544069
          Length = 94

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -2

Query: 482 GRVTLPQIARSLVFLPRGPPGIGVLFL 402
           GR+  PQ + S V  PRG PG+ VL L
Sbjct: 6   GRLPRPQGSSSAVPRPRGLPGVSVLLL 32


>07_01_0308 +
           2203597-2203774,2203886-2204066,2204141-2204282,
           2204371-2204440,2204546-2204715
          Length = 246

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 447 GFFATGTSGNWCPLLSSVHIDAMLA 373
           GFFA    G+WC LL+ ++I  + A
Sbjct: 171 GFFAAAIIGSWCNLLTVIYIGFVCA 195


>12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,
            3983250-3983301,3983497-3983654,3983756-3985617,
            3986029-3986093,3986176-3986340,3986836-3986893,
            3987479-3987590,3987661-3987712,3988080-3988140,
            3988220-3988377,3988705-3988787,3988897-3988945,
            3989122-3989185,3990225-3990317,3990410-3990543,
            3991364-3991585,3991815-3991937,3992103-3992267,
            3993064-3993450
          Length = 1479

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +2

Query: 434  VAKKPSCVLSGAR*PAHMGKLWAVSEP--SSSLTSLPRLWDTEYE*C 568
            +A +P+CVL G +    +   W+ ++   SSS+    RLWDT  + C
Sbjct: 1230 LADQPACVLEGHQDDV-LDLTWSKTDQLLSSSMDKTVRLWDTTTKAC 1275


>07_03_1061 + 23651404-23651625,23651764-23652954
          Length = 470

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 481 PHGQTLGSVRAKFKSNLPAQAMGH 552
           P G  LG+V    KSN+PA  MG+
Sbjct: 435 PFGNDLGNVDPDIKSNIPASYMGN 458


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,335,453
Number of Sequences: 37544
Number of extensions: 400349
Number of successful extensions: 1014
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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