Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H24
         (942 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    32   0.022
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   1.1  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     24   5.8  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 32.3 bits (70), Expect = 0.022
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
 Frame = +1

Query: 289 VVYATSTRNTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWG 468
           ++Y    +  A  KV+    R     ++GKH V++  A++R  +P   RG++        
Sbjct: 59  IIYVPVPKQKAFQKVQTRLVRELEKKFSGKHVVFI--AERRI-LPKPMRGRRDP-----N 110

Query: 469 KVTRPHGQTLGSVRAKFKSNL--PAQAMGHRIRVMLYPSRI 585
           K  RP    + +V      +L  PA+ +G RIRV L  S++
Sbjct: 111 KQKRPRSPNVTAVYDAILEDLVFPAEVVGKRIRVKLDGSQL 151


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 26/85 (30%), Positives = 37/85 (43%)
 Frame = +1

Query: 316 TALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGQT 495
           TAL  +    + + A+ +A  H   V   +    I   PR  KT+   + G V  P G  
Sbjct: 603 TALSCISYDPEVDQAMQFAFGHSFIVKNLEIANKITFHPR-IKTRSVTLDGDVVDPGGTL 661

Query: 496 LGSVRAKFKSNLPAQAMGHRIRVML 570
            G  RAK  + L   A  +RI+ ML
Sbjct: 662 SGGARAKGNAVLLDVAEINRIQAML 686


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 174 AKGWLQXAPGGAHKGPSQ 227
           + GW+Q  P     GPSQ
Sbjct: 520 SNGWVQPVPSHTQNGPSQ 537


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,254
Number of Sequences: 2352
Number of extensions: 14305
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102949299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)