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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H24
         (942 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC061890-1|AAH61890.1|  110|Homo sapiens ribosomal protein L35a ...   122   3e-27
BC017093-1|AAH17093.1|  110|Homo sapiens RPL35A protein protein.      122   3e-27
BC010949-1|AAH10949.1|  110|Homo sapiens ribosomal protein L35a ...   122   3e-27
BC001037-1|AAH01037.1|  110|Homo sapiens ribosomal protein L35a ...   122   3e-27
AY871273-1|AAX11429.1|  110|Homo sapiens cell growth-inhibiting ...   122   3e-27
X52966-1|CAA37138.1|  110|Homo sapiens protein ( Human mRNA for ...   119   2e-26
AL365223-3|CAI15713.1|   96|Homo sapiens ribosomal protein L35a ...    81   6e-15

>BC061890-1|AAH61890.1|  110|Homo sapiens ribosomal protein L35a
           protein.
          Length = 110

 Score =  122 bits (293), Expect = 3e-27
 Identities = 64/109 (58%), Positives = 74/109 (67%), Gaps = 4/109 (3%)
 Frame = +1

Query: 271 YSQDISVVYATSTRN----TALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRG 438
           +S+ I   Y    RN    TALLK+EG   R++  FY GK C YVY+AK  T  PGG   
Sbjct: 6   WSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG--- 62

Query: 439 KKTKLRAIWGKVTRPHGQTLGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 585
           K  K R IWGKVTR HG + G VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 63  KPNKTRVIWGKVTRAHGNS-GMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110



 Score = 31.9 bits (69), Expect = 3.5
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 264 RAVFTGYKRGLRNQHE 311
           +A+F GYKRGLRNQ E
Sbjct: 8   KAIFAGYKRGLRNQRE 23


>BC017093-1|AAH17093.1|  110|Homo sapiens RPL35A protein protein.
          Length = 110

 Score =  122 bits (293), Expect = 3e-27
 Identities = 64/109 (58%), Positives = 74/109 (67%), Gaps = 4/109 (3%)
 Frame = +1

Query: 271 YSQDISVVYATSTRN----TALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRG 438
           +S+ I   Y    RN    TALLK+EG   R++  FY GK C YVY+AK  T  PGG   
Sbjct: 6   WSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG--- 62

Query: 439 KKTKLRAIWGKVTRPHGQTLGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 585
           K  K R IWGKVTR HG + G VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 63  KPNKTRVIWGKVTRAHGNS-GMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110



 Score = 31.9 bits (69), Expect = 3.5
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 264 RAVFTGYKRGLRNQHE 311
           +A+F GYKRGLRNQ E
Sbjct: 8   KAIFAGYKRGLRNQRE 23


>BC010949-1|AAH10949.1|  110|Homo sapiens ribosomal protein L35a
           protein.
          Length = 110

 Score =  122 bits (293), Expect = 3e-27
 Identities = 64/109 (58%), Positives = 74/109 (67%), Gaps = 4/109 (3%)
 Frame = +1

Query: 271 YSQDISVVYATSTRN----TALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRG 438
           +S+ I   Y    RN    TALLK+EG   R++  FY GK C YVY+AK  T  PGG   
Sbjct: 6   WSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG--- 62

Query: 439 KKTKLRAIWGKVTRPHGQTLGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 585
           K  K R IWGKVTR HG + G VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 63  KPNKTRVIWGKVTRAHGNS-GMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110



 Score = 31.9 bits (69), Expect = 3.5
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 264 RAVFTGYKRGLRNQHE 311
           +A+F GYKRGLRNQ E
Sbjct: 8   KAIFAGYKRGLRNQRE 23


>BC001037-1|AAH01037.1|  110|Homo sapiens ribosomal protein L35a
           protein.
          Length = 110

 Score =  122 bits (293), Expect = 3e-27
 Identities = 64/109 (58%), Positives = 74/109 (67%), Gaps = 4/109 (3%)
 Frame = +1

Query: 271 YSQDISVVYATSTRN----TALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRG 438
           +S+ I   Y    RN    TALLK+EG   R++  FY GK C YVY+AK  T  PGG   
Sbjct: 6   WSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG--- 62

Query: 439 KKTKLRAIWGKVTRPHGQTLGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 585
           K  K R IWGKVTR HG + G VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 63  KPNKTRVIWGKVTRAHGNS-GMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110



 Score = 31.9 bits (69), Expect = 3.5
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 264 RAVFTGYKRGLRNQHE 311
           +A+F GYKRGLRNQ E
Sbjct: 8   KAIFAGYKRGLRNQRE 23


>AY871273-1|AAX11429.1|  110|Homo sapiens cell growth-inhibiting
           protein 33 protein.
          Length = 110

 Score =  122 bits (293), Expect = 3e-27
 Identities = 64/109 (58%), Positives = 74/109 (67%), Gaps = 4/109 (3%)
 Frame = +1

Query: 271 YSQDISVVYATSTRN----TALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRG 438
           +S+ I   Y    RN    TALLK+EG   R++  FY GK C YVY+AK  T  PGG   
Sbjct: 6   WSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG--- 62

Query: 439 KKTKLRAIWGKVTRPHGQTLGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 585
           K  K R IWGKVTR HG + G VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 63  KPNKTRVIWGKVTRAHGNS-GMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110



 Score = 31.9 bits (69), Expect = 3.5
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 264 RAVFTGYKRGLRNQHE 311
           +A+F GYKRGLRNQ E
Sbjct: 8   KAIFAGYKRGLRNQRE 23


>X52966-1|CAA37138.1|  110|Homo sapiens protein ( Human mRNA for
           ribosomal protein L35a. ).
          Length = 110

 Score =  119 bits (286), Expect = 2e-26
 Identities = 63/109 (57%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
 Frame = +1

Query: 271 YSQDISVVYATSTRN----TALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRG 438
           +S+ I   Y    RN    TALLK+EG   R++  FY GK C YVY+AK  T  PG   G
Sbjct: 6   WSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPG---G 62

Query: 439 KKTKLRAIWGKVTRPHGQTLGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 585
           K  K R IWGKVTR HG + G V AKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 63  KPNKTRVIWGKVTRAHGNS-GMVLAKFRSNLPAKAIGHRIRVMLYPSRI 110



 Score = 31.9 bits (69), Expect = 3.5
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 264 RAVFTGYKRGLRNQHE 311
           +A+F GYKRGLRNQ E
Sbjct: 8   KAIFAGYKRGLRNQRE 23


>AL365223-3|CAI15713.1|   96|Homo sapiens ribosomal protein L35a
           pseudogene 3 protein.
          Length = 96

 Score = 81.0 bits (191), Expect = 6e-15
 Identities = 42/77 (54%), Positives = 50/77 (64%)
 Frame = +1

Query: 313 NTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGQ 492
           +TALLK+EG   +++  FY GK C  VY+AK  T IPG    K  K R IWGKVTR H +
Sbjct: 23  HTALLKIEGGYAQDETEFYLGKRCACVYKAKSNTMIPG---SKPNKSRVIWGKVTRAH-R 78

Query: 493 TLGSVRAKFKSNLPAQA 543
             G V AKF SNLPA+A
Sbjct: 79  NSGMVAAKFHSNLPAKA 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,089,011
Number of Sequences: 237096
Number of extensions: 2233566
Number of successful extensions: 13476
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13457
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12381054106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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