Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H24
         (942 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p pro...   126   6e-29
AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p pro...   126   6e-29
AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA ...   126   6e-29
BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...    29   9.2  
AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...    29   9.2  
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...    29   9.2  
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...    29   9.2  
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...    29   9.2  
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...    29   9.2  

>AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p
           protein.
          Length = 157

 Score =  126 bits (303), Expect = 6e-29
 Identities = 68/144 (47%), Positives = 87/144 (60%)
 Frame = +1

Query: 154 APKSKSGPRAGSXQLLVEPTKVLRKASKPRHGRAVRKGPYSQDISVVYATSTRNTALLKV 333
           APK+   P+A          KV  K  K RHGR   K  ++            N A+LK+
Sbjct: 20  APKAVKAPKAEKPA--ASEAKVSAKKYK-RHGRLFAKAVFT-GYKRGLRNQHENQAILKI 75

Query: 334 EGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGQTLGSVRA 513
           EGA+ +    FY GK CVYVY+A+ +  +P  P  +KT++RA+WGKVTR HG T G+VRA
Sbjct: 76  EGARRKEHGSFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNT-GAVRA 133

Query: 514 KFKSNLPAQAMGHRIRVMLYPSRI 585
           +F  NLP  AMGHRIR+MLYPSRI
Sbjct: 134 RFNRNLPGHAMGHRIRIMLYPSRI 157


>AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p
           protein.
          Length = 157

 Score =  126 bits (303), Expect = 6e-29
 Identities = 68/144 (47%), Positives = 87/144 (60%)
 Frame = +1

Query: 154 APKSKSGPRAGSXQLLVEPTKVLRKASKPRHGRAVRKGPYSQDISVVYATSTRNTALLKV 333
           APK+   P+A          KV  K  K RHGR   K  ++            N A+LK+
Sbjct: 20  APKAVKAPKAEKPA--ASEAKVSAKKYK-RHGRLFAKAVFT-GYKRGLRNQHENQAILKI 75

Query: 334 EGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGQTLGSVRA 513
           EGA+ +    FY GK CVYVY+A+ +  +P  P  +KT++RA+WGKVTR HG T G+VRA
Sbjct: 76  EGARRKEHGSFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNT-GAVRA 133

Query: 514 KFKSNLPAQAMGHRIRVMLYPSRI 585
           +F  NLP  AMGHRIR+MLYPSRI
Sbjct: 134 RFNRNLPGHAMGHRIRIMLYPSRI 157


>AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA
           protein.
          Length = 157

 Score =  126 bits (303), Expect = 6e-29
 Identities = 68/144 (47%), Positives = 87/144 (60%)
 Frame = +1

Query: 154 APKSKSGPRAGSXQLLVEPTKVLRKASKPRHGRAVRKGPYSQDISVVYATSTRNTALLKV 333
           APK+   P+A          KV  K  K RHGR   K  ++            N A+LK+
Sbjct: 20  APKAVKAPKAEKPA--ASEAKVSAKKYK-RHGRLFAKAVFT-GYKRGLRNQHENQAILKI 75

Query: 334 EGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGQTLGSVRA 513
           EGA+ +    FY GK CVYVY+A+ +  +P  P  +KT++RA+WGKVTR HG T G+VRA
Sbjct: 76  EGARRKEHGSFYVGKRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNT-GAVRA 133

Query: 514 KFKSNLPAQAMGHRIRVMLYPSRI 585
           +F  NLP  AMGHRIR+MLYPSRI
Sbjct: 134 RFNRNLPGHAMGHRIRIMLYPSRI 157


>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
 Frame = +1

Query: 274 SQDISVVYATSTRNTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKL 453
           S+   ++Y    +     K++    R     ++GKH V +    +R  +P   R  +  L
Sbjct: 54  SKKAVIIYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVI---AERKILPKPTRKARNPL 110

Query: 454 RAIWGKVTRPHGQTLGSVRAKFKSNL--PAQAMGHRIRVMLYPSRI 585
                K  RP  +TL +V      +L  PA+ +G RIRV L  S++
Sbjct: 111 -----KQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQL 151


>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
 Frame = +1

Query: 274 SQDISVVYATSTRNTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKL 453
           S+   ++Y    +     K++    R     ++GKH V +    +R  +P   R  +  L
Sbjct: 54  SKKAVIIYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVI---AERKILPKPTRKARNPL 110

Query: 454 RAIWGKVTRPHGQTLGSVRAKFKSNL--PAQAMGHRIRVMLYPSRI 585
                K  RP  +TL +V      +L  PA+ +G RIRV L  S++
Sbjct: 111 -----KQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQL 151


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
 Frame = +1

Query: 274 SQDISVVYATSTRNTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKL 453
           S+   ++Y    +     K++    R     ++GKH V +    +R  +P   R  +  L
Sbjct: 54  SKKAVIIYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVI---AERKILPKPTRKARNPL 110

Query: 454 RAIWGKVTRPHGQTLGSVRAKFKSNL--PAQAMGHRIRVMLYPSRI 585
                K  RP  +TL +V      +L  PA+ +G RIRV L  S++
Sbjct: 111 -----KQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQL 151


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
 Frame = +1

Query: 274 SQDISVVYATSTRNTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKL 453
           S+   ++Y    +     K++    R     ++GKH V +    +R  +P   R  +  L
Sbjct: 54  SKKAVIIYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVI---AERKILPKPTRKARNPL 110

Query: 454 RAIWGKVTRPHGQTLGSVRAKFKSNL--PAQAMGHRIRVMLYPSRI 585
                K  RP  +TL +V      +L  PA+ +G RIRV L  S++
Sbjct: 111 -----KQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQL 151


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
 Frame = +1

Query: 274 SQDISVVYATSTRNTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKL 453
           S+   ++Y    +     K++    R     ++GKH V +    +R  +P   R  +  L
Sbjct: 54  SKKAVIIYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVI---AERKILPKPTRKARNPL 110

Query: 454 RAIWGKVTRPHGQTLGSVRAKFKSNL--PAQAMGHRIRVMLYPSRI 585
                K  RP  +TL +V      +L  PA+ +G RIRV L  S++
Sbjct: 111 -----KQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQL 151


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
 Frame = +1

Query: 274 SQDISVVYATSTRNTALLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKL 453
           S+   ++Y    +     K++    R     ++GKH V +    +R  +P   R  +  L
Sbjct: 54  SKKAVIIYVPIPQQKVFQKIQIILVRELEKKFSGKHVVVI---AERKILPKPTRKARNPL 110

Query: 454 RAIWGKVTRPHGQTLGSVRAKFKSNL--PAQAMGHRIRVMLYPSRI 585
                K  RP  +TL +V      +L  PA+ +G RIRV L  S++
Sbjct: 111 -----KQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQL 151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,610,177
Number of Sequences: 53049
Number of extensions: 620515
Number of successful extensions: 1598
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1589
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4669258284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)