BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_H21 (962 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 27 0.16 AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 25 0.66 AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 25 1.2 AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 25 1.2 AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 25 1.2 AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 24 1.5 AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 23 2.7 EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 22 6.2 AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 22 6.2 >AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog protein. Length = 406 Score = 27.5 bits (58), Expect = 0.16 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = +1 Query: 826 PPXPXXPPPPXPPXPPP 876 PP P PP P PP PP Sbjct: 175 PPLPQVPPLPLPPIFPP 191 Score = 25.4 bits (53), Expect = 0.66 Identities = 15/46 (32%), Positives = 15/46 (32%) Frame = +3 Query: 501 PXXXPXPSXXXXPPPXPPXPPPXPXAPXXXXXPXPPPAPPPPXXXP 638 P P PS P P PP P PP P PP P Sbjct: 149 PKYEPNPSIID---PGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191 Score = 25.0 bits (52), Expect = 0.88 Identities = 9/17 (52%), Positives = 9/17 (52%) Frame = +1 Query: 544 PPRPXXPPXPXPXPXPP 594 PP P PP P P PP Sbjct: 175 PPLPQVPPLPLPPIFPP 191 Score = 23.8 bits (49), Expect = 2.0 Identities = 14/43 (32%), Positives = 14/43 (32%), Gaps = 2/43 (4%) Frame = +2 Query: 596 PXPXPXPXXXXXXPPXPPPAXPXPXXXP--PXPPPPGPPXXPP 718 P P P P PP P PP P PP PP Sbjct: 149 PKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191 >AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless protein. Length = 302 Score = 25.4 bits (53), Expect = 0.66 Identities = 15/46 (32%), Positives = 15/46 (32%) Frame = +3 Query: 501 PXXXPXPSXXXXPPPXPPXPPPXPXAPXXXXXPXPPPAPPPPXXXP 638 P P PS P P PP P PP P PP P Sbjct: 149 PKYEPNPSIID---PGPALPPAGFLCNNYLPLPQVPPLPLPPIFAP 191 >AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase protein. Length = 580 Score = 24.6 bits (51), Expect = 1.2 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = -1 Query: 863 GGXGGGGXXGXGGGGGG 813 GG GGG G G GGG Sbjct: 92 GGGRGGGRDGDRGDGGG 108 Score = 24.6 bits (51), Expect = 1.2 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = -2 Query: 652 GGGXGGXXXGGGGAGGG 602 GGG GG G G GGG Sbjct: 92 GGGRGGGRDGDRGDGGG 108 Score = 23.4 bits (48), Expect = 2.7 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = -1 Query: 875 GGGXGGXGGGGXXGXGGG 822 GGG GG G G G GGG Sbjct: 92 GGGRGG-GRDGDRGDGGG 108 Score = 22.6 bits (46), Expect = 4.7 Identities = 10/24 (41%), Positives = 10/24 (41%) Frame = -3 Query: 714 GXXGGPGGGGXGGXXXGXGXAGGG 643 G GGG GG G GGG Sbjct: 85 GENNDDSGGGRGGGRDGDRGDGGG 108 >AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. Length = 790 Score = 24.6 bits (51), Expect = 1.2 Identities = 10/26 (38%), Positives = 10/26 (38%) Frame = +2 Query: 650 PAXPXPXXXPPXPPPPGPPXXPPXXP 727 P P PPPP P PP P Sbjct: 724 PLTPHEAFDVKLPPPPHPHHQPPRNP 749 Score = 24.2 bits (50), Expect = 1.5 Identities = 9/19 (47%), Positives = 9/19 (47%) Frame = +1 Query: 820 PPPPXPXXPPPPXPPXPPP 876 PPPP P PP P P Sbjct: 736 PPPPHPHHQPPRNPVGTNP 754 >AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. Length = 682 Score = 24.6 bits (51), Expect = 1.2 Identities = 10/26 (38%), Positives = 10/26 (38%) Frame = +2 Query: 650 PAXPXPXXXPPXPPPPGPPXXPPXXP 727 P P PPPP P PP P Sbjct: 616 PLTPHEAFDVKLPPPPHPHHQPPRNP 641 Score = 24.2 bits (50), Expect = 1.5 Identities = 9/19 (47%), Positives = 9/19 (47%) Frame = +1 Query: 820 PPPPXPXXPPPPXPPXPPP 876 PPPP P PP P P Sbjct: 628 PPPPHPHHQPPRNPVGTNP 646 >AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor (isoform A) protein. Length = 549 Score = 24.2 bits (50), Expect = 1.5 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = +2 Query: 677 PPXPPPPGPPXXP 715 PP P PGPP P Sbjct: 115 PPLTPSPGPPSHP 127 >AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neuroblasts defectiveprotein protein. Length = 224 Score = 23.4 bits (48), Expect = 2.7 Identities = 11/38 (28%), Positives = 12/38 (31%) Frame = +2 Query: 503 PXXAPPXXGXXPPPXPAPPXPXXXXPXPXXPPXPXPXP 616 P PP P +P P PP P P P Sbjct: 68 PVALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPP 105 Score = 22.2 bits (45), Expect = 6.2 Identities = 10/34 (29%), Positives = 11/34 (32%) Frame = +3 Query: 540 PPXPPXPPPXPXAPXXXXXPXPPPAPPPPXXXPP 641 PP P P +P P PP PP Sbjct: 72 PPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPP 105 >EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B protein. Length = 279 Score = 22.2 bits (45), Expect = 6.2 Identities = 8/21 (38%), Positives = 9/21 (42%) Frame = +1 Query: 538 PPPPRPXXPPXPXPXPXPPXP 600 PP P+P P PP P Sbjct: 250 PPTPKPRPTKVSRRKPRPPRP 270 Score = 22.2 bits (45), Expect = 6.2 Identities = 8/19 (42%), Positives = 8/19 (42%) Frame = +2 Query: 593 PPXPXPXPXXXXXXPPXPP 649 PP P P P P PP Sbjct: 250 PPTPKPRPTKVSRRKPRPP 268 >AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein protein. Length = 203 Score = 22.2 bits (45), Expect = 6.2 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = +2 Query: 680 PXPPPPGPPXXPPXXPP 730 P P P PP PP P Sbjct: 23 PHSPEPYPPRCPPIYEP 39 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.311 0.155 0.587 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 146,894 Number of Sequences: 336 Number of extensions: 5843 Number of successful extensions: 28 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 24 length of database: 122,585 effective HSP length: 57 effective length of database: 103,433 effective search space used: 27202879 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 43 (22.0 bits)
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