BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_H19 (1185 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0080 + 587674-588510 27 0.37 02_05_0925 - 32768815-32769654 26 1.1 01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 25 1.3 04_04_0760 - 27837170-27837328,27837441-27837504,27837812-278381... 24 5.0 10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081,704... 29 5.4 07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 5.4 06_03_0082 + 16363742-16364632 29 5.4 04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847... 29 5.4 02_05_0002 - 24849189-24849825,24850267-24850328 29 5.4 01_07_0076 + 40914237-40914315,40914415-40914677 25 5.7 01_06_0604 + 30536172-30537143 25 8.4 05_06_0172 + 26138238-26138474,26138712-26139854 29 9.4 >07_01_0080 + 587674-588510 Length = 278 Score = 26.6 bits (56), Expect(2) = 0.37 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = -1 Query: 699 GGGXXXXPPPPPPP 658 G G PPPPPPP Sbjct: 84 GDGMFRRPPPPPPP 97 Score = 25.4 bits (53), Expect(2) = 0.37 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -1 Query: 678 PPPPPPPXXFF 646 PPPPPPP F Sbjct: 113 PPPPPPPPPLF 123 >02_05_0925 - 32768815-32769654 Length = 279 Score = 26.2 bits (55), Expect(2) = 1.1 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = -1 Query: 699 GGGXXXXPPPPPPP 658 GG PPPPPPP Sbjct: 149 GGRFDHHPPPPPPP 162 Score = 24.2 bits (50), Expect(2) = 1.1 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = -1 Query: 678 PPPPPPPXXF 649 PPPPPPP + Sbjct: 159 PPPPPPPAHY 168 >01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593, 7039698-7039768,7040148-7040224,7040380-7040527, 7040973-7041134,7041374-7041694 Length = 597 Score = 25.4 bits (53), Expect(2) = 1.3 Identities = 8/10 (80%), Positives = 8/10 (80%) Frame = -1 Query: 678 PPPPPPPXXF 649 PPPPPPP F Sbjct: 127 PPPPPPPPPF 136 Score = 24.6 bits (51), Expect(2) = 1.3 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -1 Query: 693 GXXXXPPPPPPP 658 G PPPPPPP Sbjct: 124 GHPPPPPPPPPP 135 >04_04_0760 - 27837170-27837328,27837441-27837504,27837812-27838160, 27838906-27838960,27839489-27839821 Length = 319 Score = 24.2 bits (50), Expect(2) = 5.0 Identities = 9/17 (52%), Positives = 10/17 (58%) Frame = -1 Query: 675 PPPPPPXXFFXXKKKKK 625 PPPPPP KK+K Sbjct: 27 PPPPPPTSSTAAPKKRK 43 Score = 23.8 bits (49), Expect(2) = 5.0 Identities = 7/7 (100%), Positives = 7/7 (100%) Frame = -1 Query: 678 PPPPPPP 658 PPPPPPP Sbjct: 9 PPPPPPP 15 >10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081, 7040633-7041213 Length = 426 Score = 29.5 bits (63), Expect = 5.4 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = -1 Query: 699 GGGXXXXPPPPPPP 658 GGG PPPPPPP Sbjct: 94 GGGPAQPPPPPPPP 107 >07_03_1691 - 28726307-28726323,28726588-28726953,28727483-28727567, 28728255-28728387,28729793-28730328 Length = 378 Score = 29.5 bits (63), Expect = 5.4 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = -1 Query: 699 GGGXXXXPPPPPPP 658 GGG PPPPPPP Sbjct: 37 GGGAGPTPPPPPPP 50 >06_03_0082 + 16363742-16364632 Length = 296 Score = 29.5 bits (63), Expect = 5.4 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = -1 Query: 699 GGGXXXXPPPPPPP 658 GGG PPPPPPP Sbjct: 163 GGGEERPPPPPPPP 176 >04_03_0977 + 21381857-21383757,21384299-21384458,21384669-21384717, 21385117-21385169 Length = 720 Score = 29.5 bits (63), Expect = 5.4 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = -1 Query: 699 GGGXXXXPPPPPPP 658 GGG PPPPPPP Sbjct: 94 GGGWVQLPPPPPPP 107 >02_05_0002 - 24849189-24849825,24850267-24850328 Length = 232 Score = 29.5 bits (63), Expect = 5.4 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = -1 Query: 699 GGGXXXXPPPPPPP 658 GGG PPPPPPP Sbjct: 211 GGGGHPHPPPPPPP 224 Score = 29.5 bits (63), Expect = 5.4 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = -1 Query: 699 GGGXXXXPPPPPPP 658 GGG PPPPPPP Sbjct: 212 GGGHPHPPPPPPPP 225 >01_07_0076 + 40914237-40914315,40914415-40914677 Length = 113 Score = 25.0 bits (52), Expect(2) = 5.7 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = +1 Query: 658 GGGGGGGXXXXPP 696 GGGGGGG PP Sbjct: 85 GGGGGGGGGDEPP 97 Score = 23.0 bits (47), Expect(2) = 5.7 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +1 Query: 646 KKXXGGGGGGG 678 K+ GGGGGGG Sbjct: 76 KRCGGGGGGGG 86 >01_06_0604 + 30536172-30537143 Length = 323 Score = 25.4 bits (53), Expect(2) = 8.4 Identities = 8/10 (80%), Positives = 8/10 (80%) Frame = -1 Query: 678 PPPPPPPXXF 649 PPPPPPP F Sbjct: 42 PPPPPPPLAF 51 Score = 21.8 bits (44), Expect(2) = 8.4 Identities = 7/11 (63%), Positives = 7/11 (63%) Frame = -1 Query: 693 GXXXXPPPPPP 661 G PPPPPP Sbjct: 38 GAAAPPPPPPP 48 >05_06_0172 + 26138238-26138474,26138712-26139854 Length = 459 Score = 28.7 bits (61), Expect = 9.4 Identities = 11/18 (61%), Positives = 11/18 (61%) Frame = +2 Query: 659 GGGGGGGXXXXPPPXXXK 712 GGGGGGG PPP K Sbjct: 7 GGGGGGGGGGGPPPFLIK 24 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,404,502 Number of Sequences: 37544 Number of extensions: 193497 Number of successful extensions: 12615 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2610 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7054 length of database: 14,793,348 effective HSP length: 84 effective length of database: 11,639,652 effective search space used: 3608292120 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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