Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H19
         (1185 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2790|AAF48905.2|  437|Drosophila melanogaster CG7349-PA...    25   2.3  
AE014298-2111|AAF48430.1|  858|Drosophila melanogaster CG15028-P...    29   9.4  
AE014298-2110|AAN09656.1|  968|Drosophila melanogaster CG15028-P...    29   9.4  

>AE014298-2790|AAF48905.2|  437|Drosophila melanogaster CG7349-PA
           protein.
          Length = 437

 Score = 25.4 bits (53), Expect(2) = 2.3
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -1

Query: 678 PPPPPPPXXFFXXKKKKK 625
           PPPPPPP       K KK
Sbjct: 167 PPPPPPPAKSAPPVKAKK 184



 Score = 24.6 bits (51), Expect(2) = 2.3
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 699 GGGXXXXPPPPPPP 658
           G      PPPPPPP
Sbjct: 159 GNAPATPPPPPPPP 172


>AE014298-2111|AAF48430.1|  858|Drosophila melanogaster CG15028-PA,
           isoform A protein.
          Length = 858

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -1

Query: 699 GGGXXXXPPPPPPP 658
           GGG    PPPPPPP
Sbjct: 517 GGGAVPRPPPPPPP 530


>AE014298-2110|AAN09656.1|  968|Drosophila melanogaster CG15028-PB,
           isoform B protein.
          Length = 968

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -1

Query: 699 GGGXXXXPPPPPPP 658
           GGG    PPPPPPP
Sbjct: 627 GGGAVPRPPPPPPP 640


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,413,394
Number of Sequences: 53049
Number of extensions: 277469
Number of successful extensions: 11148
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6251
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6291255432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)