Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_H19
(1185 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 25 1.2
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 25 1.2
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 25 1.2
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 25 1.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 2.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 2.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 2.4
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 4.9
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 29 4.9
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 25.4 bits (53), Expect(2) = 1.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 678 PPPPPPPXXF 649
PPPPPPP F
Sbjct: 65 PPPPPPPPAF 74
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 693 GXXXXPPPPPPP 658
G PPPPPPP
Sbjct: 61 GYGAPPPPPPPP 72
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 25.4 bits (53), Expect(2) = 1.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 678 PPPPPPPXXF 649
PPPPPPP F
Sbjct: 65 PPPPPPPPAF 74
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 693 GXXXXPPPPPPP 658
G PPPPPPP
Sbjct: 61 GYGAPPPPPPPP 72
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 25.4 bits (53), Expect(2) = 1.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 678 PPPPPPPXXF 649
PPPPPPP F
Sbjct: 65 PPPPPPPPAF 74
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 693 GXXXXPPPPPPP 658
G PPPPPPP
Sbjct: 61 GYGAPPPPPPPP 72
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 25.0 bits (52), Expect(2) = 1.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 678 PPPPPPPXXFFXXKKKKK 625
PPPPPPP +KK+
Sbjct: 54 PPPPPPPMCGCGCGRKKR 71
Score = 24.6 bits (51), Expect(2) = 1.7
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 693 GXXXXPPPPPPP 658
G PPPPPPP
Sbjct: 48 GCAPPPPPPPPP 59
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 696 GGXXXXPPPPPPPXXF 649
GG PPPPPPP F
Sbjct: 778 GGFKGGPPPPPPPGMF 793
Score = 26.2 bits (55), Expect(2) = 2.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 693 GXXXXPPPPPPPXXF 649
G PPPPPPP F
Sbjct: 766 GGCPPPPPPPPPGGF 780
Score = 24.2 bits (50), Expect(2) = 3.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 696 GGXXXXPPPPPP 661
GG PPPPPP
Sbjct: 766 GGCPPPPPPPPP 777
Score = 24.2 bits (50), Expect(2) = 3.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 678 PPPPPPPXXFF 646
PPPPPPP F
Sbjct: 770 PPPPPPPPGGF 780
Score = 22.6 bits (46), Expect(2) = 2.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 675 PPPPPPXXFF 646
PPPPPP F
Sbjct: 784 PPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 696 GGXXXXPPPPPPPXXF 649
GG PPPPPPP F
Sbjct: 778 GGFKGGPPPPPPPGMF 793
Score = 26.2 bits (55), Expect(2) = 2.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 693 GXXXXPPPPPPPXXF 649
G PPPPPPP F
Sbjct: 766 GGCPPPPPPPPPGGF 780
Score = 24.2 bits (50), Expect(2) = 3.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 696 GGXXXXPPPPPP 661
GG PPPPPP
Sbjct: 766 GGCPPPPPPPPP 777
Score = 24.2 bits (50), Expect(2) = 3.1
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 678 PPPPPPPXXFF 646
PPPPPPP F
Sbjct: 770 PPPPPPPPGGF 780
Score = 22.6 bits (46), Expect(2) = 2.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 675 PPPPPPXXFF 646
PPPPPP F
Sbjct: 784 PPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 696 GGXXXXPPPPPPPXXF 649
GG PPPPPPP F
Sbjct: 361 GGFKGGPPPPPPPGMF 376
Score = 26.2 bits (55), Expect(2) = 2.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 693 GXXXXPPPPPPPXXF 649
G PPPPPPP F
Sbjct: 349 GGCPPPPPPPPPGGF 363
Score = 24.2 bits (50), Expect(2) = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 696 GGXXXXPPPPPP 661
GG PPPPPP
Sbjct: 349 GGCPPPPPPPPP 360
Score = 24.2 bits (50), Expect(2) = 3.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 678 PPPPPPPXXFF 646
PPPPPPP F
Sbjct: 353 PPPPPPPPGGF 363
Score = 22.6 bits (46), Expect(2) = 2.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 675 PPPPPPXXFF 646
PPPPPP F
Sbjct: 367 PPPPPPPGMF 376
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 29.5 bits (63), Expect = 4.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 699 GGGXXXXPPPPPPP 658
GGG PPPPPPP
Sbjct: 24 GGGCGCAPPPPPPP 37
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.5 bits (63), Expect = 4.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 699 GGGXXXXPPPPPPP 658
GGG PPPPPPP
Sbjct: 24 GGGCGCAPPPPPPP 37
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 29.5 bits (63), Expect = 4.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 699 GGGXXXXPPPPPPP 658
GGG PPPPPPP
Sbjct: 24 GGGCGCAPPPPPPP 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,289,940
Number of Sequences: 27780
Number of extensions: 106563
Number of successful extensions: 2394
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3245116438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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