BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_H19 (1185 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g16790.1 68417.m02536 hydroxyproline-rich glycoprotein family... 27 0.23 At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 25 1.0 At5g07770.1 68418.m00889 formin homology 2 domain-containing pro... 25 1.1 At3g05470.1 68416.m00599 formin homology 2 domain-containing pro... 26 4.9 At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 25 5.1 At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family... 25 7.1 At1g18170.1 68414.m02258 immunophilin / FKBP-type peptidyl-proly... 29 7.9 At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 24 8.7 >At4g16790.1 68417.m02536 hydroxyproline-rich glycoprotein family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 473 Score = 27.1 bits (57), Expect(2) = 0.23 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = -1 Query: 696 GGXXXXPPPPPPP 658 GG PPPPPPP Sbjct: 324 GGEFHPPPPPPPP 336 Score = 25.4 bits (53), Expect(2) = 0.23 Identities = 7/11 (63%), Positives = 9/11 (81%) Frame = -1 Query: 678 PPPPPPPXXFF 646 PPPPPPP ++ Sbjct: 332 PPPPPPPVEYY 342 >At5g07760.1 68418.m00888 formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181 Length = 853 Score = 25.4 bits (53), Expect(2) = 1.0 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -1 Query: 678 PPPPPPPXXFF 646 PPPPPPP F Sbjct: 70 PPPPPPPLPMF 80 Score = 24.6 bits (51), Expect(2) = 1.0 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -1 Query: 693 GXXXXPPPPPPP 658 G PPPPPPP Sbjct: 19 GRVPLPPPPPPP 30 >At5g07770.1 68418.m00889 formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181 Length = 722 Score = 25.4 bits (53), Expect(2) = 1.1 Identities = 8/10 (80%), Positives = 8/10 (80%) Frame = -1 Query: 678 PPPPPPPXXF 649 PPPPPPP F Sbjct: 46 PPPPPPPPMF 55 Score = 24.6 bits (51), Expect(2) = 1.1 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -1 Query: 693 GXXXXPPPPPPP 658 G PPPPPPP Sbjct: 19 GRVPLPPPPPPP 30 >At3g05470.1 68416.m00599 formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181 Length = 884 Score = 26.2 bits (55), Expect(2) = 4.9 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -1 Query: 678 PPPPPPPXXFFXXKK 634 PPPPPPP F K+ Sbjct: 371 PPPPPPPLPQFSNKR 385 Score = 21.4 bits (43), Expect(2) = 4.9 Identities = 7/12 (58%), Positives = 7/12 (58%) Frame = -1 Query: 693 GXXXXPPPPPPP 658 G PPPPPP Sbjct: 362 GISVSAPPPPPP 373 >At5g19090.1 68418.m02269 heavy-metal-associated domain-containing protein contains Pfam heavy-metal-associated domain PF00403; glycine-rich protein GRP22, rape, PIR:S31415; isoform contains a non-consensus TG-acceptor splice site at intron 3 Length = 587 Score = 25.0 bits (52), Expect(2) = 5.1 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = +1 Query: 658 GGGGGGGXXXXPP 696 GGGGGGG PP Sbjct: 129 GGGGGGGGGGGPP 141 Score = 22.6 bits (46), Expect(2) = 5.1 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = +1 Query: 646 KKXXGGGGGGG 678 +K GGGGGGG Sbjct: 120 QKIGGGGGGGG 130 >At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family protein similar to SWISS-PROT:Q15428 Length = 277 Score = 24.6 bits (51), Expect(2) = 7.1 Identities = 8/13 (61%), Positives = 8/13 (61%) Frame = -1 Query: 696 GGXXXXPPPPPPP 658 G PPPPPPP Sbjct: 225 GANGLPPPPPPPP 237 Score = 22.6 bits (46), Expect(2) = 7.1 Identities = 7/10 (70%), Positives = 7/10 (70%) Frame = -1 Query: 675 PPPPPPXXFF 646 PPPPPP F Sbjct: 242 PPPPPPSGLF 251 >At1g18170.1 68414.m02258 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein similar to (Peptidyl-prolyl cis-trans isomerase) (PPiase) (Rotamase) (SP:Q26486) [Spodoptera frugiperda]; contains Pfam profile: PF00254 FKBP-type peptidyl-prolyl cis-trans isomerases Length = 247 Score = 28.7 bits (61), Expect = 7.9 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = -1 Query: 678 PPPPPPPXXFFXXKKKKK 625 PPPPPPP +K+KK Sbjct: 43 PPPPPPPQPLASQQKRKK 60 >At3g19320.1 68416.m02450 leucine-rich repeat family protein contains leucine-rich repeats, Pfam:PF00560; Length = 493 Score = 23.8 bits (49), Expect(2) = 8.7 Identities = 7/7 (100%), Positives = 7/7 (100%) Frame = -1 Query: 678 PPPPPPP 658 PPPPPPP Sbjct: 69 PPPPPPP 75 Score = 23.0 bits (47), Expect(2) = 8.7 Identities = 9/17 (52%), Positives = 9/17 (52%) Frame = -1 Query: 675 PPPPPPXXFFXXKKKKK 625 PPPPPP F KK Sbjct: 110 PPPPPPPLHFSSPLIKK 126 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,864,087 Number of Sequences: 28952 Number of extensions: 99254 Number of successful extensions: 2825 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 613 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1756 length of database: 12,070,560 effective HSP length: 83 effective length of database: 9,667,544 effective search space used: 3006606184 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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