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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H19
         (1185 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g16790.1 68417.m02536 hydroxyproline-rich glycoprotein family...    27   0.23 
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro...    25   1.0  
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro...    25   1.1  
At3g05470.1 68416.m00599 formin homology 2 domain-containing pro...    26   4.9  
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin...    25   5.1  
At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family...    25   7.1  
At1g18170.1 68414.m02258 immunophilin / FKBP-type peptidyl-proly...    29   7.9  
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont...    24   8.7  

>At4g16790.1 68417.m02536 hydroxyproline-rich glycoprotein family
           protein contains proline-rich extensin domains,
           INTERPRO:IPR002965
          Length = 473

 Score = 27.1 bits (57), Expect(2) = 0.23
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 696 GGXXXXPPPPPPP 658
           GG    PPPPPPP
Sbjct: 324 GGEFHPPPPPPPP 336



 Score = 25.4 bits (53), Expect(2) = 0.23
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 678 PPPPPPPXXFF 646
           PPPPPPP  ++
Sbjct: 332 PPPPPPPVEYY 342


>At5g07760.1 68418.m00888 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02181
          Length = 853

 Score = 25.4 bits (53), Expect(2) = 1.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 678 PPPPPPPXXFF 646
           PPPPPPP   F
Sbjct: 70  PPPPPPPLPMF 80



 Score = 24.6 bits (51), Expect(2) = 1.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 693 GXXXXPPPPPPP 658
           G    PPPPPPP
Sbjct: 19  GRVPLPPPPPPP 30


>At5g07770.1 68418.m00889 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02181
          Length = 722

 Score = 25.4 bits (53), Expect(2) = 1.1
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 678 PPPPPPPXXF 649
           PPPPPPP  F
Sbjct: 46  PPPPPPPPMF 55



 Score = 24.6 bits (51), Expect(2) = 1.1
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 693 GXXXXPPPPPPP 658
           G    PPPPPPP
Sbjct: 19  GRVPLPPPPPPP 30


>At3g05470.1 68416.m00599 formin homology 2 domain-containing
           protein / FH2 domain-containing protein contains formin
           homology 2 domain, Pfam:PF02181
          Length = 884

 Score = 26.2 bits (55), Expect(2) = 4.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 678 PPPPPPPXXFFXXKK 634
           PPPPPPP   F  K+
Sbjct: 371 PPPPPPPLPQFSNKR 385



 Score = 21.4 bits (43), Expect(2) = 4.9
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -1

Query: 693 GXXXXPPPPPPP 658
           G     PPPPPP
Sbjct: 362 GISVSAPPPPPP 373


>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
           protein contains Pfam heavy-metal-associated domain
           PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
           isoform contains a non-consensus TG-acceptor splice site
           at intron 3
          Length = 587

 Score = 25.0 bits (52), Expect(2) = 5.1
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 658 GGGGGGGXXXXPP 696
           GGGGGGG    PP
Sbjct: 129 GGGGGGGGGGGPP 141



 Score = 22.6 bits (46), Expect(2) = 5.1
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 646 KKXXGGGGGGG 678
           +K  GGGGGGG
Sbjct: 120 QKIGGGGGGGG 130


>At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family
           protein similar to SWISS-PROT:Q15428
          Length = 277

 Score = 24.6 bits (51), Expect(2) = 7.1
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 696 GGXXXXPPPPPPP 658
           G     PPPPPPP
Sbjct: 225 GANGLPPPPPPPP 237



 Score = 22.6 bits (46), Expect(2) = 7.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 675 PPPPPPXXFF 646
           PPPPPP   F
Sbjct: 242 PPPPPPSGLF 251


>At1g18170.1 68414.m02258 immunophilin / FKBP-type peptidyl-prolyl
           cis-trans isomerase family protein similar to
           (Peptidyl-prolyl cis-trans isomerase) (PPiase)
           (Rotamase) (SP:Q26486) [Spodoptera frugiperda]; contains
           Pfam profile: PF00254 FKBP-type peptidyl-prolyl
           cis-trans isomerases
          Length = 247

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 678 PPPPPPPXXFFXXKKKKK 625
           PPPPPPP      +K+KK
Sbjct: 43  PPPPPPPQPLASQQKRKK 60


>At3g19320.1 68416.m02450 leucine-rich repeat family protein
           contains leucine-rich repeats, Pfam:PF00560;
          Length = 493

 Score = 23.8 bits (49), Expect(2) = 8.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -1

Query: 678 PPPPPPP 658
           PPPPPPP
Sbjct: 69  PPPPPPP 75



 Score = 23.0 bits (47), Expect(2) = 8.7
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1

Query: 675 PPPPPPXXFFXXKKKKK 625
           PPPPPP   F     KK
Sbjct: 110 PPPPPPPLHFSSPLIKK 126


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,864,087
Number of Sequences: 28952
Number of extensions: 99254
Number of successful extensions: 2825
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 12,070,560
effective HSP length: 83
effective length of database: 9,667,544
effective search space used: 3006606184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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