BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_H17 (875 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002 SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 34 0.13 SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 33 0.23 SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 33 0.40 SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 32 0.70 SB_812| Best HMM Match : FH2 (HMM E-Value=0) 31 1.2 SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 31 1.2 SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 31 1.6 SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1 SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1 SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7 SB_11832| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7 SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9 SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9 SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9 SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 4.9 SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 29 6.5 SB_984| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5 SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5 SB_16879| Best HMM Match : Stig1 (HMM E-Value=1) 29 6.5 SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6 SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6 SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6 >SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1000 Score = 40.7 bits (91), Expect = 0.002 Identities = 22/51 (43%), Positives = 22/51 (43%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678 PPPPG PP P P P PG GGA PPP G PP P Sbjct: 945 PPPPGGNA---PPPPPPPGGSAPPPG--GGAPPLPPPPGGSAPPPPPPPPP 990 Score = 34.7 bits (76), Expect = 0.099 Identities = 18/51 (35%), Positives = 19/51 (37%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678 PPPP PP P + P G A PPP G PP G P Sbjct: 922 PPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPP 972 Score = 33.5 bits (73), Expect = 0.23 Identities = 18/51 (35%), Positives = 18/51 (35%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678 PPPP G PP P P GG PPP PP G P Sbjct: 921 PPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAP 971 Score = 28.7 bits (61), Expect = 6.5 Identities = 17/48 (35%), Positives = 17/48 (35%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTG 669 PPPPG PP P P P G PP G PP G Sbjct: 934 PPPPGGSAPSQPPP---PGGNAPPPPPPPGGSAPPPGGGAPPLPPPPG 978 >SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) Length = 739 Score = 34.3 bits (75), Expect = 0.13 Identities = 17/43 (39%), Positives = 19/43 (44%) Frame = +1 Query: 562 PPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXPQKNF 690 PP P P P PGF GGA PPP PP P + + Sbjct: 195 PPPPPPP---PPPGFPGGAPPPPPPPFGAPPPPALNGGPPREY 234 Score = 30.7 bits (66), Expect = 1.6 Identities = 14/30 (46%), Positives = 14/30 (46%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGG 615 PPPPG G PP P P P P GG Sbjct: 201 PPPPGFPGGA-PPPPPPPFGAPPPPALNGG 229 >SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) Length = 768 Score = 33.5 bits (73), Expect = 0.23 Identities = 23/70 (32%), Positives = 25/70 (35%), Gaps = 4/70 (5%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXK----KTPAPGFXGGAXXXPPPXGXXFFPPKTGXXPQKNFF 693 PPPPG PP P P P P GGA PPP F P+K Sbjct: 665 PPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPPPPPGFGGF---ANLVKPRKGVI 721 Query: 694 KXXXXXKKLF 723 K + LF Sbjct: 722 KPGVEMRPLF 731 >SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) Length = 341 Score = 32.7 bits (71), Expect = 0.40 Identities = 18/37 (48%), Positives = 18/37 (48%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPP 636 PPPP G PP P P P PG GGA PPP Sbjct: 304 PPPPPPPGGAPPPPPPPP---PPPPG-DGGAPPPPPP 336 Score = 30.3 bits (65), Expect = 2.1 Identities = 17/45 (37%), Positives = 17/45 (37%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPP 660 PPPP G PP P P P P PPP G PP Sbjct: 292 PPPPPADGSAPAPPPPPPPGGAPPP----PPPPPPPPPGDGGAPP 332 >SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) Length = 330 Score = 31.9 bits (69), Expect = 0.70 Identities = 18/54 (33%), Positives = 18/54 (33%) Frame = +1 Query: 517 KKXPPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678 K PP P PP P P TP F PPP F PP P Sbjct: 266 KGHPPIPSASQNATPPPPPPPPSNTPGM-FASSGFQPPPPPPTDFAPPPPPPEP 318 Score = 28.3 bits (60), Expect = 8.6 Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 4/46 (8%) Frame = +1 Query: 526 PPPPGXXGFF----FXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXF 651 PPP G F F PP P P P P PPP F Sbjct: 285 PPPSNTPGMFASSGFQPPPPPPTDFAPPPPPPEPTSELPPPPPPPF 330 >SB_812| Best HMM Match : FH2 (HMM E-Value=0) Length = 1430 Score = 31.1 bits (67), Expect = 1.2 Identities = 16/39 (41%), Positives = 16/39 (41%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXG 642 PPPP G F PP P P P P PPP G Sbjct: 653 PPPPPGGGMFPPPPPPPPGGGVPGP-------PKPPPPG 684 >SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) Length = 305 Score = 31.1 bits (67), Expect = 1.2 Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 2/53 (3%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPX--PXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678 PPPP PP P P PAP A PPP G PP P Sbjct: 153 PPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPP 205 >SB_33909| Best HMM Match : FH2 (HMM E-Value=0) Length = 1063 Score = 30.7 bits (66), Expect = 1.6 Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXG-GAXXXPPPXGXXFFPP 660 PPPPG G PP P +P PG G PPP G PP Sbjct: 717 PPPPGCAGL---PPPP----PSPQPGCAGLPPPPPPPPPGCAGLPP 755 Score = 28.7 bits (61), Expect = 6.5 Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 1/52 (1%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXP-PPXGXXFFPPKTGXXP 678 PPPP G PP P P P PG G P P G PP P Sbjct: 700 PPPPLLSGTLPMPPPPPP----PPPGCAGLPPPPPSPQPGCAGLPPPPPPPP 747 >SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 964 Score = 30.3 bits (65), Expect = 2.1 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 1/49 (2%) Frame = +1 Query: 526 PPPPGXX-GFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTG 669 PPPPG G+ PP P PG G PP G + P G Sbjct: 514 PPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPG 562 Score = 29.9 bits (64), Expect = 2.8 Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 2/50 (4%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKK--TPAPGFXGGAXXXPPPXGXXFFPPKTG 669 PPPPG G PP P + P PG G PP G PP G Sbjct: 503 PPPPGA-GQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPG 551 Score = 29.5 bits (63), Expect = 3.7 Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%) Frame = +1 Query: 526 PPPPGX-XGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTG 669 PPPPG G+ PP P PG G PPP PP G Sbjct: 547 PPPPGAGQGWGQPPPGAGQGGGPPPPG--AGQGGPPPPGAGQEGPPPPG 593 Score = 28.7 bits (61), Expect = 6.5 Identities = 16/51 (31%), Positives = 17/51 (33%) Frame = -1 Query: 680 WGXXPVXGGKKXXPXGGGKXXAPPXKPGAGVFFXGXGXGGXKKKPXXPGGG 528 WG P G+ P G P PGAG G P PG G Sbjct: 556 WGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPPPPGAG 606 Score = 28.7 bits (61), Expect = 6.5 Identities = 17/48 (35%), Positives = 19/48 (39%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTG 669 PPPPG G PP + P PG G PP G + P G Sbjct: 569 PPPPGA-GQGGPPPPGAGQEGPPPPGAGQGGGPPPPGAGQGWGLPPPG 615 >SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 669 Score = 30.3 bits (65), Expect = 2.1 Identities = 17/53 (32%), Positives = 18/53 (33%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXPQK 684 PPPP PP P P P G PP G PP T P + Sbjct: 365 PPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPSE 417 Score = 29.1 bits (62), Expect = 4.9 Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 1/52 (1%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPP-XGXXFFPPKTGXXP 678 PPPP PP P K P P G PPP G PP T P Sbjct: 357 PPPPTNNT---PPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPP 405 Score = 29.1 bits (62), Expect = 4.9 Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 1/57 (1%) Frame = +1 Query: 517 KKXPPPPGXXGFFFXPPXPXPXK-KTPAPGFXGGAXXXPPPXGXXFFPPKTGXXPQK 684 K PPPP G PP P P P P G PPP PP G +K Sbjct: 373 KPPPPPPPTNG---PPPPPPPTNGPPPPPPPTNGPPPPPPPTNG---PPSEGKCGRK 423 >SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 213 Score = 29.5 bits (63), Expect = 3.7 Identities = 15/46 (32%), Positives = 18/46 (39%) Frame = +1 Query: 529 PPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKT 666 PPPG + PP + PGF PPP +PP T Sbjct: 145 PPPGST-VHYPPPQTTMGYPSAQPGFAPPGNYPPPPAPPPAYPPVT 189 >SB_11832| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 493 Score = 29.5 bits (63), Expect = 3.7 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = +1 Query: 529 PPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678 PPPG ++ PP + P PG A PPP ++PP+ P Sbjct: 360 PPPGT---YYPPPPQGNYNQYPVPGGQNYAGAPPPP----YYPPQEYQAP 402 >SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2248 Score = 29.1 bits (62), Expect = 4.9 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 2/52 (3%) Frame = +1 Query: 529 PPPGXXGFFFXPPXPXPXKKTPA-PGFXGGAXXXPPPXG-XXFFPPKTGXXP 678 PPP + PP P + +P+ P G PPP G PP G P Sbjct: 2140 PPPMGSSRYGPPPPMGPARHSPSGPSPLGAPPSVPPPMGAPPSGPPPMGAPP 2191 >SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 440 Score = 29.1 bits (62), Expect = 4.9 Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 1/38 (2%) Frame = +1 Query: 526 PPPPGXXGFFFXPP-XPXPXKKTPAPGFXGGAXXXPPP 636 PPPP G PP P P P G PPP Sbjct: 281 PPPPPLTGGMLPPPFGGHPAAAPPPPPLPAGVPAPPPP 318 >SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 291 Score = 29.1 bits (62), Expect = 4.9 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = -1 Query: 635 GGGKXXAPPXKPGAGVFFXGXGXGGXKKKPXXPGGGGXFF 516 GGG + G G + G G GG + GGGG F+ Sbjct: 92 GGGGRRERGGRGGGGGYGGGGGYGGGGRSYGGGGGGGGFY 131 >SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) Length = 514 Score = 29.1 bits (62), Expect = 4.9 Identities = 17/45 (37%), Positives = 18/45 (40%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPP 660 PPPP G PP P P + P G PPP G PP Sbjct: 366 PPPPPVGG---PPPPPPPIEGRPPSSL--GNPPPPPPPGRGAPPP 405 Score = 28.7 bits (61), Expect = 6.5 Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 3/48 (6%) Frame = +1 Query: 526 PPPPGXXGFFFXPPX---PXPXKKTPAPGFXGGAXXXPPPXGXXFFPP 660 PPPP PP P P AP GGA PPP PP Sbjct: 328 PPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPP 375 Score = 28.3 bits (60), Expect = 8.6 Identities = 16/51 (31%), Positives = 17/51 (33%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678 PPPP G PP P P + PPP PP G P Sbjct: 305 PPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAP 355 >SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) Length = 135 Score = 28.7 bits (61), Expect = 6.5 Identities = 14/37 (37%), Positives = 15/37 (40%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPP 636 PPP G G PP P P G+ G PPP Sbjct: 81 PPPSGQYG---APPTSQPYGAPPTSGYPGYQQHPPPP 114 >SB_984| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 232 Score = 28.7 bits (61), Expect = 6.5 Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 6/60 (10%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXP------PPXGXXFFPPKTGXXPQKN 687 PP G + P P P + P + G P PP G F PP P KN Sbjct: 166 PPYQQPPGVYQGPHQPPPYCQPPPGNYSGYGAMDPRQGGAQPPMGQNFAPPPYTAEPSKN 225 >SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 911 Score = 28.7 bits (61), Expect = 6.5 Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGX-XFFPPKTG 669 PPP G G + P PA G+ G PPP G + PP G Sbjct: 615 PPPTGYPGGY-----PGTHTAPPAGGYPTGQHPPPPPAGYPGYGPPPAG 658 >SB_16879| Best HMM Match : Stig1 (HMM E-Value=1) Length = 232 Score = 28.7 bits (61), Expect = 6.5 Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 6/60 (10%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXP------PPXGXXFFPPKTGXXPQKN 687 PP G + P P P + P + G P PP G F PP P KN Sbjct: 166 PPYQQPPGVYQGPHQPPPYCQPPPGNYSGYGAMDPRQGGAQPPMGQNFAPPPYTAEPSKN 225 >SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1486 Score = 28.3 bits (60), Expect = 8.6 Identities = 18/51 (35%), Positives = 19/51 (37%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678 PPP G PP P P P F G PPP G PP+ P Sbjct: 1224 PPPMGHHMMNMPPPPPAMPPDGP-PKFMG---LPPPPPGMRPMPPQPPFMP 1270 >SB_40954| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 274 Score = 28.3 bits (60), Expect = 8.6 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPP 636 PPPPG G P P +TP+P G PPP Sbjct: 56 PPPPGP-GQPEMPGQPQVTPQTPSPASPGLPFMPPPP 91 >SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 290 Score = 28.3 bits (60), Expect = 8.6 Identities = 15/51 (29%), Positives = 17/51 (33%) Frame = +1 Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678 PPPP + PP P P P PPP + PP P Sbjct: 149 PPPPNPP---YPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYP 196 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,346,367 Number of Sequences: 59808 Number of extensions: 129605 Number of successful extensions: 497 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 216 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 401 length of database: 16,821,457 effective HSP length: 82 effective length of database: 11,917,201 effective search space used: 2490695009 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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