Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_H17
(875 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.002
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.050
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.050
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.050
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.27
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.27
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.27
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.27
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.27
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.62
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.62
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 32 0.62
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.4
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.4
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 30 1.9
U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical pr... 30 1.9
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 30 1.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.5
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 3.3
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 4.4
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 29 4.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 7.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 7.6
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 7.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 7.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
PPPP G + PP P P + PG G PPP F PP G P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPG---MPPPPPPSRFGPPGMGGMP 334
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
PPPP G + PP P P + PG G PPP F PP G P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPG---MPPPPPPSRFGPPGMGGMP 344
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.050
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
PPPPG PP P P P GG PPP G PP +G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPPPGG---LPPISGGPP 759
Score = 31.5 bits (68), Expect = 0.82
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPP 636
PPPP G PP P P P GF GG PPP
Sbjct: 760 PPPPPPGG---CPPPPPPP---PPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPP 660
PPPPG P P P P PG PPP G PP
Sbjct: 745 PPPPGGLPPISGGPPPPP----PPPGGCPPPPPPPPPGGFKGGPP 785
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPP 660
PPP G PP P P P P G PPP G PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPP 773
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.050
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
PPPPG PP P P P GG PPP G PP +G P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPPPGG---LPPISGGPP 759
Score = 31.5 bits (68), Expect = 0.82
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPP 636
PPPP G PP P P P GF GG PPP
Sbjct: 760 PPPPPPGG---CPPPPPPP---PPGGFKGGPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPP 660
PPPPG P P P P PG PPP G PP
Sbjct: 745 PPPPGGLPPISGGPPPPP----PPPGGCPPPPPPPPPGGFKGGPP 785
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPP 660
PPP G PP P P P P G PPP G PP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPP 773
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.050
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
PPPPG PP P P P GG PPP G PP +G P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPPPGG---LPPISGGPP 342
Score = 31.5 bits (68), Expect = 0.82
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPP 636
PPPP G PP P P P GF GG PPP
Sbjct: 343 PPPPPPGG---CPPPPPPP---PPGGFKGGPPPPPPP 373
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPP 660
PPPPG P P P P PG PPP G PP
Sbjct: 328 PPPPGGLPPISGGPPPPP----PPPGGCPPPPPPPPPGGFKGGPP 368
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPP 660
PPP G PP P P P P G PPP G PP
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPP 356
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +1
Query: 529 PPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPP 660
PPP GF PP P P P P G PPP PP
Sbjct: 66 PPPVPNGFI--PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP 107
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFP----PKTGXXP 678
PPPP PP P P P G PPP G P PKT P
Sbjct: 84 PPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTPVNP 138
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPP 660
PPPPG G PP P P GG PP G PP
Sbjct: 75 PPPPGPGGIP-PPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXP 630
PPPPG G + PP P P PG G P
Sbjct: 435 PPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNP 469
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
PPPPG G P P G GG PP + PP TG P
Sbjct: 411 PPPPGGPG--------APGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/57 (35%), Positives = 23/57 (40%)
Frame = +1
Query: 508 FXXKKXPPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
F K+ PP G PP P P K +P G PPP PP+TG P
Sbjct: 225 FRGKRQAPPAGS------PPPPPPPKGSPP--LAGSGSPPPPPAAGSPPPPRTGSPP 273
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
PPPP G PP P P P PPP G PP+ G P
Sbjct: 255 PPPPPAAG---SPPPPRTGSPPPPPT----GSPPPPPAGGSPPPPRAGSPP 298
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/57 (35%), Positives = 23/57 (40%)
Frame = +1
Query: 508 FXXKKXPPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
F K+ PP G PP P P K +P G PPP PP+TG P
Sbjct: 246 FRGKRQAPPAGS------PPPPPPPKGSPP--LAGSGSPPPPPAAGSPPPPRTGSPP 294
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
PPPP G PP P P P PPP G PP+ G P
Sbjct: 276 PPPPPAAG---SPPPPRTGSPPPPPT----GSPPPPPAGGSPPPPRAGSPP 319
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/57 (35%), Positives = 23/57 (40%)
Frame = +1
Query: 508 FXXKKXPPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
F K+ PP G PP P P K +P G PPP PP+TG P
Sbjct: 231 FRGKRQAPPAGS------PPPPPPPKGSPP--LAGSGSPPPPPAAGSPPPPRTGSPP 279
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
PPPP G PP P P P PPP G PP+ G P
Sbjct: 261 PPPPPAAG---SPPPPRTGSPPPPPT----GSPPPPPAGGSPPPPRAGSPP 304
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
PPP + P P P + PAP GG PP G PP G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPR-PAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
PPP + P P P + PAP GG PP G PP G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPR-PAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.62
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = -1
Query: 659 GGKKXXPXGGGKXXAPPXKP---GAGVFFXGXGXGGXKKKPXXPGGGG 525
GG GGG APP P G G G G GG P P GGG
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.62
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = -1
Query: 659 GGKKXXPXGGGKXXAPPXKP---GAGVFFXGXGXGGXKKKPXXPGGGG 525
GG GGG APP P G G G G GG P P GGG
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
PPP + P P P + PAP GG PP G PP G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPR-PAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXP 678
PPP + P P P + PAP GG PP G PP G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPR-PAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 529 PPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPP 636
PPPG G F PP P P P PG PP
Sbjct: 664 PPPGGLGGFMPPPPPPP----PMPGDLSSLLAAAPP 695
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 529 PPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPP 636
PPPG G F PP P P P PG PP
Sbjct: 664 PPPGGLGGFMPPPPPPP----PMPGDLSSLLAAAPP 695
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 562 PPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTG 669
PP P P P P G PPP G PP G
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPG 805
>U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical
protein B0222.1 protein.
Length = 285
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAP 600
PPPPG GF PP P P P
Sbjct: 235 PPPPGFQGFQQGPPPSAPVYSAPPP 259
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 562 PPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTG 669
PP P P P P G PPP G PP G
Sbjct: 770 PPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPPG 805
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXPQKNFFK 696
PPPP P P P P P GG PPP G P K ++
Sbjct: 563 PPPPPLPQNLSGAPPPPP----PPPPMLGGPPPPPPPPGGLMGPASNDAKTIKKIYQ 615
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = +1
Query: 517 KKXPPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXPQK 684
++ PPPP G PP P + G + PPP PP P+K
Sbjct: 249 RRPPPPPKGTG---SPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPTGEPEK 301
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/55 (30%), Positives = 20/55 (36%)
Frame = +1
Query: 517 KKXPPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXPQ 681
++ PPPP G PP P + G PPP G PP PQ
Sbjct: 62 RRPPPPPKGTGTPPPPPTGEPQDLSAEEG-NASRRPPPPPKGTGTPPPPPTGEPQ 115
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXG 612
PPPP G + PP P P P + G
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAGGPSYAG 70
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAP 600
PPPP G + PP P P T AP
Sbjct: 40 PPPPVGAGVGYAPPPPRPYGATYAP 64
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 4/41 (9%)
Frame = +1
Query: 526 PPPPGXXGFF----FXPPXPXPXKKTPAPGFXGGAXXXPPP 636
PPPP G PP P P P GA PPP
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 654
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 4/41 (9%)
Frame = +1
Query: 526 PPPPGXXGFF----FXPPXPXPXKKTPAPGFXGGAXXXPPP 636
PPPP G PP P P P GA PPP
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 480
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +1
Query: 526 PPPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXPQ 681
P PPG G PP P P G+ G P P G P + G Q
Sbjct: 255 PGPPGPAG----PPGPPGNNGAPGGGYGVGPPGPPGPSGRPGAPGQPGPDGQ 302
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = +1
Query: 529 PPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXPQKNF 690
PPP F F PP P P P F G PPP PP G P + F
Sbjct: 290 PPP----FGFFPPPPRGHFPPPPPHFMG--RGMPPPFMPP--PPHFGMGPPRGF 335
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = +1
Query: 529 PPPGXXGFFFXPPXPXPXKKTPAPGFXGGAXXXPPPXGXXFFPPKTGXXPQKNF 690
PPP F F PP P P P F G PPP PP G P + F
Sbjct: 290 PPP----FGFFPPPPRGHFPPPPPHFMG--RGMPPPFMPP--PPHFGMGPPRGF 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,256,795
Number of Sequences: 27780
Number of extensions: 138676
Number of successful extensions: 631
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -