BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_H14 (856 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g22060.1 68414.m02759 expressed protein 31 0.98 At5g08110.1 68418.m00946 DEAD/DEAH box helicase, putative severa... 31 1.3 At3g47030.1 68416.m05107 F-box family protein contains F-box dom... 29 3.0 At3g12200.1 68416.m01521 protein kinase family protein contains ... 29 3.0 At1g52560.1 68414.m05933 26.5 kDa class I small heat shock prote... 29 3.0 At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 29 5.2 At1g16540.1 68414.m01981 molybdenum cofactor sulfurase (LOS5) (A... 29 5.2 At3g42800.1 68416.m04480 expressed protein hypothetical proteins... 28 6.9 At5g57230.1 68418.m07150 expressed protein 28 9.1 At5g55540.1 68418.m06919 expressed protein 28 9.1 At5g12970.1 68418.m01487 C2 domain-containing protein contains I... 28 9.1 >At1g22060.1 68414.m02759 expressed protein Length = 1999 Score = 31.1 bits (67), Expect = 0.98 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +1 Query: 202 ESMLDTHSLWSNLANEMQHLDNMMKELSLKFPSIINE 312 E MLDT +S++ E++ + + +LSLKF + E Sbjct: 1932 EEMLDTKGRYSSMETELREMHDRYSQLSLKFAEVEGE 1968 >At5g08110.1 68418.m00946 DEAD/DEAH box helicase, putative several putative ATP-dependent helicases Length = 1058 Score = 30.7 bits (66), Expect = 1.3 Identities = 21/98 (21%), Positives = 49/98 (50%), Gaps = 2/98 (2%) Frame = +1 Query: 319 VEGDKYQISIHLPGYEQKDINVKAKNGVLMVQANSAFNHYLKIQNLPWDVNSEGSWVYEK 498 + G+ + + G +D+ K+ ++S F+ Y+K + L D + + Sbjct: 20 INGESTTVQVSSDG-TIRDLKKALKSCFPPASSSSNFHLYIKGEKLKLDTRVAAITINDG 78 Query: 499 DVLKITFPLKQKQPEDSKRP-VAEPTETTS-TNVSREE 606 D+L + FP K+K+ + +P +++P+ +S T+ ++E Sbjct: 79 DILGL-FPFKKKELRQTPKPDLSKPSSLSSRTSTMKDE 115 >At3g47030.1 68416.m05107 F-box family protein contains F-box domain Pfam:PF00646 Length = 414 Score = 29.5 bits (63), Expect = 3.0 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%) Frame = -2 Query: 738 ELRIVSDVDSVRGRXYSFRDLIGLXGCLQADVNVPHVAL--GGELHLFTTYIR 586 ELR+++DVD V+ + +L L AD++V V + GE+ L T++IR Sbjct: 305 ELRVLNDVDEVKWSQIIY-ELPNYWNNLPADIDVSIVGMTSAGEIVLATSHIR 356 >At3g12200.1 68416.m01521 protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290 Length = 571 Score = 29.5 bits (63), Expect = 3.0 Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 5/60 (8%) Frame = +1 Query: 499 DVLKITFPLKQKQPEDSKRP--VAEPTETTST-NVSREEME--FTTESNVRDVDVGLETA 663 D LKI+ QK E P TET + N +E E F+ ES +RDVDVG+ +A Sbjct: 369 DTLKISEFTSQKSDESLIDPDIAVYSTETPAEENALPKETENIFSEESQLRDVDVGVVSA 428 >At1g52560.1 68414.m05933 26.5 kDa class I small heat shock protein-like (HSP26.5-P) contains Pfam profile: PF00011 Hsp20/alpha crystallin family; identified in Scharf, K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237. Length = 232 Score = 29.5 bits (63), Expect = 3.0 Identities = 12/79 (15%), Positives = 40/79 (50%) Frame = +1 Query: 184 FSPYVRESMLDTHSLWSNLANEMQHLDNMMKELSLKFPSIINEGRVEGDKYQISIHLPGY 363 F+P + E T + + L ++++ + ++ ++ + + + D Y++ +PG Sbjct: 88 FTPTLNEFFPPT--IGNTLIQATENMNRIFDNFNVNPFQLMGQVKEQDDCYKLRYEVPGL 145 Query: 364 EQKDINVKAKNGVLMVQAN 420 ++D+ + +G+L ++ + Sbjct: 146 TKEDVKITVNDGILTIKGD 164 >At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam profile: PF00168 C2 domain Length = 815 Score = 28.7 bits (61), Expect = 5.2 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = +1 Query: 244 NEMQHLDNMMKELSLKFPSIINEGRVEG 327 N+ L N MK++ +KF ++I++G +EG Sbjct: 735 NKALLLSNQMKQVMIKFQNLIDDGDLEG 762 >At1g16540.1 68414.m01981 molybdenum cofactor sulfurase (LOS5) (ABA3) identical to molybdenum cofactor sulfurase (LOS5/ABA3) [Arabidopsis thaliana] GI:15407262; supporting cDNA gi|15407261|gb|AY034895.1| Length = 819 Score = 28.7 bits (61), Expect = 5.2 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = -3 Query: 590 FVEVVSVGSATGLLLSSGCFCFSGKVIFNTSFS*TQLPSEFTSQGRFC 447 ++EV + S +G+ L +GCFC G S ++L S G C Sbjct: 410 YLEVEKLASLSGIQLRTGCFCNPGACAKYLELSHSELRSN-VEAGHIC 456 >At3g42800.1 68416.m04480 expressed protein hypothetical proteins - Arabidopsis thaliana; expression supported by MPSS Length = 341 Score = 28.3 bits (60), Expect = 6.9 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Frame = -3 Query: 653 KPTSTSRTLLSVVNSI-SSRLTFVEVVSVGSATGLLLSSGCFCFS 522 +P S L S +NSI S V++ SVG T + SS CFS Sbjct: 155 QPVSPGARLTSFLNSIFQSNAKKVKLCSVGKTTDVKSSSSKSCFS 199 >At5g57230.1 68418.m07150 expressed protein Length = 160 Score = 27.9 bits (59), Expect = 9.1 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +1 Query: 241 ANEMQHLDNMMKELSLKFPSIINEGRVEGDKY 336 +N QHLD M++E + +F I RVE KY Sbjct: 60 SNYTQHLDRMLEEAAAEFYPNIKFMRVECPKY 91 >At5g55540.1 68418.m06919 expressed protein Length = 1380 Score = 27.9 bits (59), Expect = 9.1 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +1 Query: 262 DNMMKELSLKFPSIINEGRVEGDKYQISIH 351 D + SL PSI+ EGR + K+QI+ H Sbjct: 866 DPSSPDSSLLVPSILEEGRGKTQKWQINTH 895 >At5g12970.1 68418.m01487 C2 domain-containing protein contains INTERPRO:IPR000008 C2 domain Length = 769 Score = 27.9 bits (59), Expect = 9.1 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +3 Query: 294 PQHYKRRTR-GRRQVSDIYSPAWLRTERHQRESEKWSADGA 413 PQ Y+ R GR+ ++ W+ T+ + S+ W +D A Sbjct: 140 PQWYRLEDRHGRKVKGELMLAVWMGTQADEAFSDAWHSDAA 180 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,201,014 Number of Sequences: 28952 Number of extensions: 330423 Number of successful extensions: 1111 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1069 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1108 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1989897600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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