BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_H13 (902 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 79 2e-13 UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 71 3e-11 UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 66 9e-10 UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09 UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07 UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004 UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 43 0.009 UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.022 UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.087 UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 36 1.1 UniRef50_A5P062 Cluster: Putative uncharacterized protein; n=2; ... 34 4.3 UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.7 UniRef50_A6WEC5 Cluster: Putative uncharacterized protein; n=1; ... 33 10.0 >UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; root|Rep: Putative uncharacterized protein - Salmonella typhimurium Length = 127 Score = 79.0 bits (186), Expect = 2e-13 Identities = 36/36 (100%), Positives = 36/36 (100%) Frame = +2 Query: 557 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 664 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 59 Score = 57.2 bits (132), Expect = 5e-07 Identities = 24/33 (72%), Positives = 25/33 (75%) Frame = +3 Query: 633 PWKLPRALSCFRPXRLPDTCPPFSLREAWRFLI 731 P + P FRP RLPDTCPPFSLREAWRFLI Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLI 81 >UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organisms|Rep: Predicted protein - Nematostella vectensis Length = 97 Score = 71.3 bits (167), Expect = 3e-11 Identities = 32/36 (88%), Positives = 33/36 (91%) Frame = +2 Query: 557 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 664 TSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLF 95 >UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; Escherichia coli|Rep: Putative uncharacterized protein - Escherichia coli Length = 147 Score = 66.5 bits (155), Expect = 9e-10 Identities = 30/36 (83%), Positives = 31/36 (86%) Frame = +2 Query: 557 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLF 664 TSI K DAQ+ GGETRQDYKD RRFPL APSCALLF Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLF 127 Score = 60.9 bits (141), Expect = 4e-08 Identities = 49/127 (38%), Positives = 63/127 (49%), Gaps = 6/127 (4%) Frame = +1 Query: 322 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 501 R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT--------DGDGNFLEDT-RKTLSKEE 76 Query: 502 GTVKRPRCWRFSIGSAPLNEHHKN------RRSSQRWRNPTGL*RYQAFPPGSSLVRSPV 663 RPR RFSIGSAPL K+ + Q +++P R+ P +L+ P Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPR---RFPLVAPSCALLFLPF 130 Query: 664 SDPXAYR 684 P ++R Sbjct: 131 GLPVSFR 137 >UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; root|Rep: Putative uncharacterized protein - Escherichia coli Length = 61 Score = 64.5 bits (150), Expect = 4e-09 Identities = 30/38 (78%), Positives = 30/38 (78%) Frame = -3 Query: 498 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 385 P LLTCSF YPLILWITVLPPLSEL PLAA ERP Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56 >UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE - Myxococcus xanthus Length = 486 Score = 58.0 bits (134), Expect = 3e-07 Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%) Frame = +1 Query: 298 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 465 CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322 >UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-hemolysin - Aeromonas hydrophila Length = 59 Score = 44.4 bits (100), Expect = 0.004 Identities = 20/20 (100%), Positives = 20/20 (100%) Frame = +3 Query: 417 HSKAVIRLSTESGDNAGKNM 476 HSKAVIRLSTESGDNAGKNM Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59 >UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; Beggiatoa sp. SS|Rep: Putative uncharacterized protein - Beggiatoa sp. SS Length = 114 Score = 43.2 bits (97), Expect = 0.009 Identities = 20/49 (40%), Positives = 31/49 (63%) Frame = +2 Query: 521 VAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFP 667 ++ +F T+ITKI Q + +T+ +YK T FPL++PS +LLFP Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFP 113 >UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Magnoliophyta|Rep: Putative reverse transcriptase - Zingiber officinale (Ginger) Length = 49 Score = 41.9 bits (94), Expect = 0.022 Identities = 22/41 (53%), Positives = 26/41 (63%) Frame = +2 Query: 224 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 346 +++LT L RF V +ALMNRPTRGERRFAYW Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41 >UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterobacteriaceae|Rep: Lactose operon repressor - Escherichia coli (strain K12) Length = 360 Score = 39.9 bits (89), Expect = 0.087 Identities = 19/24 (79%), Positives = 21/24 (87%) Frame = -1 Query: 368 ERGSGRAPNTQTASPRALADSLMQ 297 +R + APNTQTASPRALADSLMQ Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348 >UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 - Citrobacter koseri ATCC BAA-895 Length = 99 Score = 36.3 bits (80), Expect = 1.1 Identities = 19/43 (44%), Positives = 25/43 (58%) Frame = -3 Query: 711 PEGRKADRYPVSXRVGNRRAHEGASRGKRLVSL*SCRVSPPLT 583 P+G+KA++ + NRRAHEGA+ K SL PPLT Sbjct: 57 PKGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99 >UniRef50_A5P062 Cluster: Putative uncharacterized protein; n=2; Proteobacteria|Rep: Putative uncharacterized protein - Methylobacterium sp. 4-46 Length = 829 Score = 34.3 bits (75), Expect = 4.3 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 2/83 (2%) Frame = +1 Query: 442 PQNQGITQERTCEQKASKR--PGTVKRPRCWRFSIGSAPLNEHHKNRRSSQRWRNPTGL* 615 P +G R + +R PG PR R S G A ++RR + R+P G Sbjct: 702 PDGRGRASPRARRTRNGRRSWPGPPPAPRAPRRSAGPARPARRRRSRRCGRSSRSPAGRR 761 Query: 616 RYQAFPPGSSLVRSPVSDPXAYR 684 R P + R P S P +R Sbjct: 762 RAPGTRPRRAAGRRPASGPCRWR 784 >UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precursor; n=2; Polaromonas|Rep: Putative uncharacterized protein precursor - Polaromonas sp. (strain JS666 / ATCC BAA-500) Length = 268 Score = 33.9 bits (74), Expect = 5.7 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%) Frame = -3 Query: 507 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 385 G W +G L L++ LI+W+ LPPL++ IP+A+ + P Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201 >UniRef50_A6WEC5 Cluster: Putative uncharacterized protein; n=1; Kineococcus radiotolerans SRS30216|Rep: Putative uncharacterized protein - Kineococcus radiotolerans SRS30216 Length = 168 Score = 33.1 bits (72), Expect = 10.0 Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = -2 Query: 721 RHASRREKGGQVSGKRQGRKQESARGSFQG--ETPGIFIVLSGFATSDLSVDFCDARSGG 548 R ASR ++ Q+ +R+ +Q++A + + G +V + A + ++ F DARS G Sbjct: 34 RTASRADRAQQLPTQRRAPRQQAAVAALDAALQESGCILVSTSVAEAGCTLAFYDARSLG 93 Query: 547 RSLWKNASNAA 515 R++ AS AA Sbjct: 94 RAVDVIASAAA 104 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 619,521,579 Number of Sequences: 1657284 Number of extensions: 11491219 Number of successful extensions: 32867 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 31362 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 32834 length of database: 575,637,011 effective HSP length: 100 effective length of database: 409,908,611 effective search space used: 81981722200 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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