Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_H12
(1098 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 38 0.017
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 36 0.039
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 34 0.21
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.36
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 33 0.36
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 33 0.36
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 33 0.48
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 33 0.48
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.48
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical pr... 32 0.83
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.83
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 32 0.83
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 31 1.1
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.1
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.5
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 1.5
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 1.5
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 31 1.5
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 1.9
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 31 1.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.5
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 3.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 3.4
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 3.4
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 30 3.4
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.4
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.4
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 4.4
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 4.4
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 5.9
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 29 5.9
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 5.9
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 7.8
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 29 7.8
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 7.8
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 7.8
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 7.8
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 7.8
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 7.8
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 7.8
U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astaci... 29 7.8
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 7.8
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 7.8
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 7.8
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 7.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 7.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 7.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 7.8
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 7.8
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 37.5 bits (83), Expect = 0.017
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = -2
Query: 146 AXPPPRPXPXXXXXLXXPIPPXPPXPPXPPTLX*RAPLXP 27
A PPP P P + PP PP PP PPTL +AP P
Sbjct: 65 ATPPPPPPPPPLISILQQAPPPPP-PPPPPTL--KAPPPP 101
Score = 30.7 bits (66), Expect = 1.9
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Frame = -2
Query: 140 PPPRPXPXXXXXLXXPIPPXPPX------PPXPPTLX*RAP 36
PPP P P P PP PP PP PP L + P
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTP 109
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 36.3 bits (80), Expect = 0.039
Identities = 19/38 (50%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 28 GXRGALXXRVGGXGGX-GGXGGIGXXRXXYXXGXGRGG 138
G RG GG GG GG GG G R Y G GRGG
Sbjct: 296 GGRGGRGGFGGGRGGPMGGRGGFGGDRGGYGGGGGRGG 333
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 33.9 bits (74), Expect = 0.21
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -2
Query: 140 PPPRPXPXXXXXLXXPIPPXPPXPPXPPTL 51
PPP P P P PP PP PP PP L
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPP-PPPPPAL 525
Score = 33.1 bits (72), Expect = 0.36
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 137 PPRPXPXXXXXLXXPIPPXPPXPPXPP 57
PP P P +PP PP PP PP
Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPPP 522
Score = 29.1 bits (62), Expect = 5.9
Identities = 23/94 (24%), Positives = 26/94 (27%), Gaps = 2/94 (2%)
Frame = +1
Query: 823 PKPTXTXHXPXXPXTPPXXX--VHXXXPXGQRXPXXXRKPLCAXDRXXPXQTPQPQXLXR 996
PK P P PP + P KP P +P PQ
Sbjct: 433 PKTPTRVAPPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEV 492
Query: 997 XXXHXQXXXTXPSXPXXPTTPXRPXXKPPXPPPP 1098
+ P P T P PP PPPP
Sbjct: 493 S----KSPPPPPPLPPIATPSSVPPPPPPPPPPP 522
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical protein
C29F4.1 protein.
Length = 299
Score = 33.1 bits (72), Expect = 0.36
Identities = 24/93 (25%), Positives = 28/93 (30%), Gaps = 6/93 (6%)
Frame = +2
Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXC---PAXXESPXAPXTEXXPNKRPNHKXXXAR 1000
PG P + PP P P K C PA P P + N P +
Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGQDGQ 179
Query: 1001 PPTXXXXXPDPP--XPXXPRPPXXPXXNHPXPP 1093
P P P P P P P + P P
Sbjct: 180 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 212
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical protein
T28C6.6 protein.
Length = 299
Score = 33.1 bits (72), Expect = 0.36
Identities = 24/93 (25%), Positives = 28/93 (30%), Gaps = 6/93 (6%)
Frame = +2
Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXC---PAXXESPXAPXTEXXPNKRPNHKXXXAR 1000
PG P + PP P P K C PA P P + N P +
Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQ 179
Query: 1001 PPTXXXXXPDPP--XPXXPRPPXXPXXNHPXPP 1093
P P P P P P P + P P
Sbjct: 180 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 212
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical protein
T28C6.4 protein.
Length = 299
Score = 33.1 bits (72), Expect = 0.36
Identities = 24/93 (25%), Positives = 28/93 (30%), Gaps = 6/93 (6%)
Frame = +2
Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXC---PAXXESPXAPXTEXXPNKRPNHKXXXAR 1000
PG P + PP P P K C PA P P + N P +
Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQ 179
Query: 1001 PPTXXXXXPDPP--XPXXPRPPXXPXXNHPXPP 1093
P P P P P P P + P P
Sbjct: 180 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 212
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 33.1 bits (72), Expect = 0.36
Identities = 24/93 (25%), Positives = 28/93 (30%), Gaps = 6/93 (6%)
Frame = +2
Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXC---PAXXESPXAPXTEXXPNKRPNHKXXXAR 1000
PG P + PP P P K C PA P P + N P +
Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQ 179
Query: 1001 PPTXXXXXPDPP--XPXXPRPPXXPXXNHPXPP 1093
P P P P P P P + P P
Sbjct: 180 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 212
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 33.1 bits (72), Expect = 0.36
Identities = 24/93 (25%), Positives = 28/93 (30%), Gaps = 6/93 (6%)
Frame = +2
Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXC---PAXXESPXAPXTEXXPNKRPNHKXXXAR 1000
PG P + PP P P K C PA P P + N P +
Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQ 179
Query: 1001 PPTXXXXXPDPP--XPXXPRPPXXPXXNHPXPP 1093
P P P P P P P + P P
Sbjct: 180 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 212
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical protein
T10B10.1 protein.
Length = 428
Score = 32.7 bits (71), Expect = 0.48
Identities = 27/114 (23%), Positives = 36/114 (31%), Gaps = 2/114 (1%)
Frame = +2
Query: 755 RRPPXRTXRXPRXXXPXXXDGXTXSXPGPXIXXXXRXPPXTXX--STXXPXPAKXCPAXX 928
+R RT P + + PG R PP T +T PA PA
Sbjct: 278 QRQDDRTPPSSGTSAPQPPPRGSTAAPGTRAPPATRAPPATRAPPATTRAPPATTRPAPA 337
Query: 929 ESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXPXXNHPXP 1090
P E + P+ P+ P P P P P P ++P P
Sbjct: 338 SQPPVREPETPDSGYPSPAPQEPAHPSPSYPSPSYPSPSYP-SPSYPSPSYPSP 390
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 32.7 bits (71), Expect = 0.48
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 140 PPPRPXPXXXXXLXXPIPPXPPXPPXPP 57
PPP P P L P PP PP PP P
Sbjct: 153 PPPTPIPTPVPILEPP-PPPPPVPPLSP 179
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.7 bits (71), Expect = 0.48
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 140 PPPRPXPXXXXXLXXPIPPXPPXPP 66
PPP P P P+PP PP PP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPP 1363
Score = 31.5 bits (68), Expect = 1.1
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -2
Query: 140 PPPRPXPXXXXXLXXPIPPXPPXPPXPPTLX*RAP 36
P P P P + P PP PP PPT+ +AP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTMS-KAP 1369
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 7/73 (9%)
Frame = +2
Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKR-------PNHKXXXARPPTXXXXXPDPPXPXXPR 1054
P P++ CPA ++ N+R NH+ + + PP P P
Sbjct: 1287 PQPSESCPAPPKNSSKKRNNRRGNRRNTNEHIQANHEDSDSFSTSRSSSPSPPPPPPPPP 1346
Query: 1055 PPXXPXXNHPXPP 1093
PP P PP
Sbjct: 1347 PPSDDLTPVPPPP 1359
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 32.3 bits (70), Expect = 0.63
Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Frame = +2
Query: 884 STXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXAR----PPTXXXXXP-DPPXPXX 1048
S P P + A SP P P P R PP+ P PP P
Sbjct: 121 SPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEP 180
Query: 1049 PRPPXXPXXNHPXPP 1093
PP P P PP
Sbjct: 181 RNPPRTPPSPIPPPP 195
>Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical protein
C54G4.4 protein.
Length = 868
Score = 31.9 bits (69), Expect = 0.83
Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 1/77 (1%)
Frame = +1
Query: 871 PXXXVHXXXPXGQRXPXXXRKPLCAXDRXXPXQTPQPQXLXRXXXHXQXXXTXP-SXPXX 1047
P +H P G++ P + P +P P + H T P + P
Sbjct: 768 PNGNIHVTLPIGRQMGRPSLPPSMLFNPSIPPPSPTPSQILYSFDHEPIYDTPPDTIPYQ 827
Query: 1048 PTTPXRPXXKPPXPPPP 1098
P + P PPPP
Sbjct: 828 PESVYERLPDRPAPPPP 844
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.9 bits (69), Expect = 0.83
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -2
Query: 137 PPRPXPXXXXXLXXPI-PPXPPXPPXPPTLX*RAPLXP 27
PP P P P PP PP PP PPT P P
Sbjct: 226 PPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGP 263
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/66 (27%), Positives = 24/66 (36%)
Frame = +2
Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXPXX 1075
P P P+ P P + + P+ + + PP P PP P PP P
Sbjct: 210 PSPGPVDPSEDPKPSEPPSPGPVD--PSDEPSPSDPP-GPPGPPGPPTRRPPGPPGPPTR 266
Query: 1076 NHPXPP 1093
P PP
Sbjct: 267 RPPGPP 272
Score = 29.5 bits (63), Expect = 4.4
Identities = 25/91 (27%), Positives = 27/91 (29%), Gaps = 2/91 (2%)
Frame = +2
Query: 827 SXPGPXIXXXXRXP--PXTXXSTXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXAR 1000
S PGP P P + K P P E P+ P
Sbjct: 193 SSPGPVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPG- 251
Query: 1001 PPTXXXXXPDPPXPXXPRPPXXPXXNHPXPP 1093
PPT P PP P RPP P PP
Sbjct: 252 PPTRRP--PGPPGPPTRRPPGPPGPPTRRPP 280
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = -2
Query: 140 PPPRPXPXXXXXLXXPIPPX--PPXPPXPPT 54
PP P P P PP PP PP PPT
Sbjct: 246 PPGPPGPPTRRPPGPPGPPTRRPPGPPGPPT 276
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 31.9 bits (69), Expect = 0.83
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 58 GGXGGXGGXGGIGXXRXXYXXGXGRGGG 141
GG GG GG GG G + G G GG
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGGSGG 82
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 3/60 (5%)
Frame = -2
Query: 227 PXGRXGAXKPXAXTXXAXXXXLVXXGXAXP--PPRPX-PXXXXXLXXPIPPXPPXPPXPP 57
P G+ GA P A G P PP P P PP PP PP PP
Sbjct: 158 PDGQPGAPGPNGQPGAAGTTSTNEPGSPGPAGPPGPAGPAGEDAAAPESPPGPPGPPGPP 217
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 140 PPPRPXPXXXXXLXXPIPPXPPXPPXPP 57
PPP P P P PP PP PP
Sbjct: 112 PPPAPYPQHAVPAPAPYQQQPPPPPPPP 139
Score = 28.7 bits (61), Expect = 7.8
Identities = 23/103 (22%), Positives = 24/103 (23%)
Frame = +2
Query: 785 PRXXXPXXXDGXTXSXPGPXIXXXXRXPPXTXXSTXXPXPAKXCPAXXESPXAPXTEXXP 964
P P P P P P A PA +P P
Sbjct: 51 PPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAP 110
Query: 965 NKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXPXXNHPXPP 1093
P A P PP P P P P P PP
Sbjct: 111 APPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153
Score = 28.7 bits (61), Expect = 7.8
Identities = 18/86 (20%), Positives = 22/86 (25%)
Frame = +2
Query: 833 PGPXIXXXXRXPPXTXXSTXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTX 1012
P P + + P P PA P P P + PP
Sbjct: 80 PAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPP 139
Query: 1013 XXXXPDPPXPXXPRPPXXPXXNHPXP 1090
P P P P P +H P
Sbjct: 140 HYPPPPPHYPPPPPAPHSAYIDHSAP 165
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical protein
F23H12.4 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +2
Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXP 1069
P A P P AP T P K P PP PP P P PP P
Sbjct: 109 PAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGP--PGPPGAP 164
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.5
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 6/56 (10%)
Frame = -2
Query: 161 VXXGXAXPPPRPX--PXXXXXLXXPIPPXPPX----PPXPPTLX*RAPLXPXXGVG 12
V G PPP P P IPP PP PP PP P P G+G
Sbjct: 69 VPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +2
Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXP 1069
P A P P AP T P K P PP PP P P PP P
Sbjct: 104 PAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGP--PGPPGAP 159
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 1 (col-1) gene, complete cds. ).
Length = 296
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +2
Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXP 1069
P A P P AP T P K P PP PP P P PP P
Sbjct: 104 PAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGP--PGPPGAP 159
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/47 (29%), Positives = 17/47 (36%)
Frame = +2
Query: 917 PAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRP 1057
P+ SP T P + P + P P PP P PRP
Sbjct: 536 PSPEPSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPPPAKPRP 582
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical protein
Y49E10.10 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.9
Identities = 30/103 (29%), Positives = 33/103 (32%), Gaps = 3/103 (2%)
Frame = +2
Query: 761 PPXRTXRXPRXXXPXXXDGXTXSXPGPXIXXXXRXPPXT--XXSTXXPXPAKXCPAXXES 934
PP T + P T P P PP T +T P P K P +
Sbjct: 175 PPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAP-PPPTTNKEVTTVAPVP-KPAPVTAPA 232
Query: 935 PXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDP-PXPXXPRPP 1060
P P E K K A PP P P P P P PP
Sbjct: 233 PNPPAPENTTAKVETTKPTKAAPPA---PTPVPNPVPSPPPPP 272
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein 33
protein.
Length = 304
Score = 30.7 bits (66), Expect = 1.9
Identities = 25/93 (26%), Positives = 28/93 (30%), Gaps = 6/93 (6%)
Frame = +2
Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXCPAXXESPXAP---XTEXXPNKRPNHKXXXAR 1000
PG P + PP P P K CP P P + N P A
Sbjct: 125 PGAPGLPGNPGKPPVQPCEPITPPPCKPCPDGPAGPPGPPGAPGDAGTNGAPGAPGGDAP 184
Query: 1001 P-PTXXXXXPDPP-XPXXPRPPXXPXXNHPXPP 1093
P P PP P P P P + P P
Sbjct: 185 PGEAGPKGPPGPPGSPGAPGEPGRPGDDAPSEP 217
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Frame = -2
Query: 140 PPPRPXPXXXXXLXXPIPPXPPX---PPXPP 57
PPP P P P PP PP PP PP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPPP 593
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Frame = -2
Query: 140 PPPRPXPXXXXXLXXPIPPXPPXP----PXPP 57
PPP P P P PP PP P P PP
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -2
Query: 140 PPPRPXPXXXXXLXXPIPPXP---PXPPXPPT 54
PP P P + P+PP P P PP PP+
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPS 292
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -2
Query: 134 PRPXPXXXXXLXXPIPPXPPX-PPXPPTLX*RAPLXPXXGVG 12
PRP P + P PP PP P PP + P P G
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 326
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +2
Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPP-XPXXPRPP 1060
P P P P P P P+ PP P PP P P PP
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -2
Query: 140 PPPRPXPXXXXXLXXPIPPXP---PXPPXPPT 54
PP P P + P+PP P P PP PP+
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPS 302
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = -2
Query: 134 PRPXPXXXXXLXXPIPPXPPX-PPXPPTLX*RAPLXPXXGVG 12
PRP P + P PP PP P PP + P P G
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 336
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +2
Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPP-XPXXPRPP 1060
P P P P P P P+ PP P PP P P PP
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 152 GXAXPPPRPXPXXXXXLXXPIPPXPPXPPXPP 57
G A PP P P P PP PP PP
Sbjct: 252 GPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPP 283
Score = 29.1 bits (62), Expect = 5.9
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = -2
Query: 152 GXAXPPPRPX-PXXXXXLXXPIPPXPPXPPXPP 57
G A P P P P PP PP PP PP
Sbjct: 190 GNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPP 222
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/58 (27%), Positives = 18/58 (31%)
Frame = -2
Query: 227 PXGRXGAXKPXAXTXXAXXXXLVXXGXAXPPPRPXPXXXXXLXXPIPPXPPXPPXPPT 54
P R A P + A PPP P P PP PP PP+
Sbjct: 601 PENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPS 658
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/58 (27%), Positives = 18/58 (31%)
Frame = -2
Query: 227 PXGRXGAXKPXAXTXXAXXXXLVXXGXAXPPPRPXPXXXXXLXXPIPPXPPXPPXPPT 54
P R A P + A PPP P P PP PP PP+
Sbjct: 427 PENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPS 484
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = +2
Query: 914 CPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXPXXNHPXPP 1093
CP P P P P PP PP P P PP P P PP
Sbjct: 30 CPTPMCQPRMPCAAPMPMPMP---MPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPP 86
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 29.9 bits (64), Expect = 3.4
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 4/47 (8%)
Frame = -2
Query: 146 AXPPPR----PXPXXXXXLXXPIPPXPPXPPXPPTLX*RAPLXPXXG 18
A PPP P P + PP PP PP P AP P G
Sbjct: 62 AIPPPSYAQPPQPYAQSPIAAVPPPPPPPPPQPAPAQAPAPKYPSPG 108
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 29.5 bits (63), Expect = 4.4
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 95 PIPPXPPXPPXPP 57
P+PP PP PP PP
Sbjct: 784 PVPPPPPVPPPPP 796
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical protein
F55C10.3 protein.
Length = 266
Score = 29.5 bits (63), Expect = 4.4
Identities = 22/93 (23%), Positives = 27/93 (29%), Gaps = 6/93 (6%)
Frame = +2
Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXC---PAXXESPXAPXTEXXPNKRPNHKXXXAR 1000
PG P + PP P P + C P P P + N P +
Sbjct: 87 PGAPGLPGNPGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQ 146
Query: 1001 PPTXXXXXPDPP--XPXXPRPPXXPXXNHPXPP 1093
P P P P P P P + P P
Sbjct: 147 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 179
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical protein
F55C10.2 protein.
Length = 299
Score = 29.5 bits (63), Expect = 4.4
Identities = 22/93 (23%), Positives = 27/93 (29%), Gaps = 6/93 (6%)
Frame = +2
Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXC---PAXXESPXAPXTEXXPNKRPNHKXXXAR 1000
PG P + PP P P + C P P P + N P +
Sbjct: 120 PGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQ 179
Query: 1001 PPTXXXXXPDPP--XPXXPRPPXXPXXNHPXPP 1093
P P P P P P P + P P
Sbjct: 180 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 212
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 29.5 bits (63), Expect = 4.4
Identities = 22/78 (28%), Positives = 22/78 (28%)
Frame = -1
Query: 1092 GGXGWFXXGXXGGRGXXGXGGSGXXXLXVGGRAXXXLWLGRLXGXXSVXGAXGLSXXAGX 913
G GW G GRG G G G G W G G G G G
Sbjct: 44 GRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGG 103
Query: 912 SLAGXGXXVDXXVXGGXR 859
G G GG R
Sbjct: 104 RGGGGGGRGGGGGGGGGR 121
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 4.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -2
Query: 140 PPPRPXPXXXXXLXXPIPPXPPXPPXPPTLX*RAPLXP 27
PPP P P P+P PP P PP P+ P
Sbjct: 27 PPPCPPPPPPMCAPPPLP-CPPPPICPPQFCPPPPMCP 63
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -2
Query: 146 AXPP-PRPXPXXXXXLXXPIPPXPPXPPXPP 57
A PP P P P P PP P PP PP
Sbjct: 39 APPPLPCPPPPICPPQFCPPPPMCPPPPPPP 69
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -2
Query: 152 GXAXPPPRPXPXXXXXLXXPIPPXPPXPPXPPTLX*RAPLXP 27
G + P P P P P PP PP P +L AP P
Sbjct: 656 GSSMPMPVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPP 697
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -2
Query: 152 GXAXPPPRPXPXXXXXLXXPIPPXPPXPPXPPTLX*RAPLXP 27
G + P P P P P PP PP P +L AP P
Sbjct: 656 GSSMPMPVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPP 697
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical protein
Y41E3.2 protein.
Length = 289
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +2
Query: 917 PAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXPXXNHP 1084
P P AP P + P PP PP P P P P N P
Sbjct: 104 PGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGP--PGQPGIPGDNGP 157
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical protein
F54D11.2 protein.
Length = 1145
Score = 29.1 bits (62), Expect = 5.9
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = -2
Query: 140 PPPRPXPXXXXXLXXPIPPXPPXP-PXPPTLX*RAPLXP 27
PPP P P + P+ PP P P PP R P+ P
Sbjct: 1103 PPPPPLPILQNPVATPMSQQPPLPSPAPPPP--RGPVDP 1139
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.1 bits (62), Expect = 5.9
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 146 AXPPPRPXPXXXXXLXXPIPPXPPXPPXPPT 54
A PPP P P P PP PP P+
Sbjct: 154 APPPPPPPPPVSVPSSKPTPPPPPPAQQKPS 184
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.1 bits (62), Expect = 5.9
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -2
Query: 146 AXPPPRPXPXXXXXLXXPIPPXPPXPPXPPT 54
A PPP P P P PP PP P+
Sbjct: 154 APPPPPPPPPVSVPSSKPTPPPPPPAQQKPS 184
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical protein
F14F7.1 protein.
Length = 305
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +2
Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPT--XXXXXPDPPXPXXPR 1054
P P K CP P P P RP RP T P PP P PR
Sbjct: 146 PTPCKPCPGGRPGPPGP-----PG-RPGSDGQPGRPATGGGAAPRPGPPGPKGPR 194
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical protein
ZC376.8 protein.
Length = 278
Score = 28.7 bits (61), Expect = 7.8
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +2
Query: 971 RPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXP 1069
+P K + P+ P PP P P PP P
Sbjct: 36 KPKKKKDVSGAPSAESPPPPPPAPKVPEPPKAP 68
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical protein
F54B11.2 protein.
Length = 304
Score = 28.7 bits (61), Expect = 7.8
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPP 1060
P P K CPA P P P A P P PP P P P
Sbjct: 148 PPPCKPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAP-----SPPGPPGPSGPAGP 197
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 58 GGXGGXGGXGGIGXXRXXYXXGXGRGGGXAKP 153
GG GG GG GG G G GG KP
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKP 116
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical protein
T05A1.2 protein.
Length = 300
Score = 28.7 bits (61), Expect = 7.8
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +2
Query: 917 PAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXPXXNHPXPP 1093
P P AP P K P PP P P P P P P P P
Sbjct: 115 PGTPGRPGAPGAPGHPGKPPQSPCEPLTPPPCPACPPGP--PGAPGAPGKPGSEGPPGP 171
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 58 GGXGGXGGXGGIGXXRXXYXXGXGRGGGXAKP 153
GG GG GG GG G G GG KP
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKP 116
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein 34
protein.
Length = 299
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/80 (23%), Positives = 22/80 (27%), Gaps = 1/80 (1%)
Frame = +2
Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPT 1009
PG P + PP P P K CP P P + P +
Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAA 179
Query: 1010 XXXXXPDPPXPXXPRPPXXP 1069
P P P P P P
Sbjct: 180 PGEPGPKGP-PGPPGAPGAP 198
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein 43
protein.
Length = 303
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +2
Query: 917 PAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXP 1069
P P AP P K P PP PP P P PP P
Sbjct: 118 PGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGP--PGPPGAP 166
>U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astacin
protease protein15 protein.
Length = 571
Score = 28.7 bits (61), Expect = 7.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 95 PIPPXPPXPPXPPT 54
PI P PP PP PPT
Sbjct: 419 PIQPLPPVPPLPPT 432
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 58 GGXGGXGGXGGIGXXRXXYXXGXGRGGGXAKP 153
GG GG GG GG G G GG KP
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKP 116
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 58 GGXGGXGGXGGIGXXRXXYXXGXGRGGGXAKP 153
GG GG GG GG G G GG KP
Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKP 116
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular collagen
RAM-4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 7.8
Identities = 19/80 (23%), Positives = 22/80 (27%), Gaps = 1/80 (1%)
Frame = +2
Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPT 1009
PG P + PP P P K CP P P + P +
Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAA 179
Query: 1010 XXXXXPDPPXPXXPRPPXXP 1069
P P P P P P
Sbjct: 180 PGEPGPKGP-PGPPGAPGAP 198
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 7.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 152 GXAXPPPRPXPXXXXXLXXPIPPXPPXPPXPP 57
G PP P P P P PP PP PP
Sbjct: 120 GGVPAPPNP-PRTCCPPPTPAAPPPPPPPPPP 150
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 7.8
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +2
Query: 884 STXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPX 1063
S P P K P S P + P PPT P PP P PP
Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP--PPPPAGGSPPPPR 293
Query: 1064 XPXXNHPXPP 1093
P PP
Sbjct: 294 AGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 7.8
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +2
Query: 884 STXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPX 1063
S P P K P S P + P PPT P PP P PP
Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP--PPPPAGGSPPPPR 314
Query: 1064 XPXXNHPXPP 1093
P PP
Sbjct: 315 AGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 7.8
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +2
Query: 884 STXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPX 1063
S P P K P S P + P PPT P PP P PP
Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP--PPPPAGGSPPPPR 299
Query: 1064 XPXXNHPXPP 1093
P PP
Sbjct: 300 AGSPPPPPPP 309
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen protein.
Length = 303
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +2
Query: 917 PAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXP 1069
P P AP P K P PP PP P P PP P
Sbjct: 118 PGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGP--PGPPGAP 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,527,401
Number of Sequences: 27780
Number of extensions: 191876
Number of successful extensions: 3162
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2441
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2960813354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -