BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_H12 (1098 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 38 0.017 U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 36 0.039 U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 34 0.21 Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.36 Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.36 Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 33 0.36 AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 33 0.36 AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 33 0.36 Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 33 0.48 AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 33 0.48 AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.48 U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.63 Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical pr... 32 0.83 U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.83 L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 32 0.83 Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 31 1.1 U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.1 Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.5 Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.5 V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 1.5 J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 1.5 AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 31 1.5 Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 1.9 U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 31 1.9 AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.9 Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.5 U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.5 AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.5 U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 3.4 U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 3.4 U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 3.4 AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 30 3.4 Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 4.4 Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 29 4.4 Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 29 4.4 U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.4 U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.4 AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 4.4 AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 4.4 Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 5.9 U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 29 5.9 U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 5.9 U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 5.9 Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 7.8 Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 29 7.8 Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 7.8 Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 7.8 Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 7.8 V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 7.8 U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 7.8 U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 7.8 U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astaci... 29 7.8 J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 7.8 AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 7.8 AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 7.8 AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 7.8 AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 7.8 AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 7.8 AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 7.8 AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 7.8 >AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily assigned gene nameprotein 268 protein. Length = 881 Score = 37.5 bits (83), Expect = 0.017 Identities = 19/40 (47%), Positives = 21/40 (52%) Frame = -2 Query: 146 AXPPPRPXPXXXXXLXXPIPPXPPXPPXPPTLX*RAPLXP 27 A PPP P P + PP PP PP PPTL +AP P Sbjct: 65 ATPPPPPPPPPLISILQQAPPPPP-PPPPPTL--KAPPPP 101 Score = 30.7 bits (66), Expect = 1.9 Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 6/41 (14%) Frame = -2 Query: 140 PPPRPXPXXXXXLXXPIPPXPPX------PPXPPTLX*RAP 36 PPP P P P PP PP PP PP L + P Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTP 109 >U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical protein C27H5.3 protein. Length = 448 Score = 36.3 bits (80), Expect = 0.039 Identities = 19/38 (50%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +1 Query: 28 GXRGALXXRVGGXGGX-GGXGGIGXXRXXYXXGXGRGG 138 G RG GG GG GG GG G R Y G GRGG Sbjct: 296 GGRGGRGGFGGGRGGPMGGRGGFGGDRGGYGGGGGRGG 333 >U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein B0280.13 protein. Length = 616 Score = 33.9 bits (74), Expect = 0.21 Identities = 15/30 (50%), Positives = 15/30 (50%) Frame = -2 Query: 140 PPPRPXPXXXXXLXXPIPPXPPXPPXPPTL 51 PPP P P P PP PP PP PP L Sbjct: 497 PPPPPLPPIATPSSVPPPPPPP-PPPPPAL 525 Score = 33.1 bits (72), Expect = 0.36 Identities = 12/27 (44%), Positives = 13/27 (48%) Frame = -2 Query: 137 PPRPXPXXXXXLXXPIPPXPPXPPXPP 57 PP P P +PP PP PP PP Sbjct: 496 PPPPPPLPPIATPSSVPPPPPPPPPPP 522 Score = 29.1 bits (62), Expect = 5.9 Identities = 23/94 (24%), Positives = 26/94 (27%), Gaps = 2/94 (2%) Frame = +1 Query: 823 PKPTXTXHXPXXPXTPPXXX--VHXXXPXGQRXPXXXRKPLCAXDRXXPXQTPQPQXLXR 996 PK P P PP + P KP P +P PQ Sbjct: 433 PKTPTRVAPPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEV 492 Query: 997 XXXHXQXXXTXPSXPXXPTTPXRPXXKPPXPPPP 1098 + P P T P PP PPPP Sbjct: 493 S----KSPPPPPPLPPIATPSSVPPPPPPPPPPP 522 >Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical protein C29F4.1 protein. Length = 299 Score = 33.1 bits (72), Expect = 0.36 Identities = 24/93 (25%), Positives = 28/93 (30%), Gaps = 6/93 (6%) Frame = +2 Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXC---PAXXESPXAPXTEXXPNKRPNHKXXXAR 1000 PG P + PP P P K C PA P P + N P + Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGQDGQ 179 Query: 1001 PPTXXXXXPDPP--XPXXPRPPXXPXXNHPXPP 1093 P P P P P P P + P P Sbjct: 180 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 212 >Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical protein T28C6.6 protein. Length = 299 Score = 33.1 bits (72), Expect = 0.36 Identities = 24/93 (25%), Positives = 28/93 (30%), Gaps = 6/93 (6%) Frame = +2 Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXC---PAXXESPXAPXTEXXPNKRPNHKXXXAR 1000 PG P + PP P P K C PA P P + N P + Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQ 179 Query: 1001 PPTXXXXXPDPP--XPXXPRPPXXPXXNHPXPP 1093 P P P P P P P + P P Sbjct: 180 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 212 >Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical protein T28C6.4 protein. Length = 299 Score = 33.1 bits (72), Expect = 0.36 Identities = 24/93 (25%), Positives = 28/93 (30%), Gaps = 6/93 (6%) Frame = +2 Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXC---PAXXESPXAPXTEXXPNKRPNHKXXXAR 1000 PG P + PP P P K C PA P P + N P + Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQ 179 Query: 1001 PPTXXXXXPDPP--XPXXPRPPXXPXXNHPXPP 1093 P P P P P P P + P P Sbjct: 180 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 212 >AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen structural gene, probablecuticle component, from embryo to adult (28.7 kD) (col-3) protein. Length = 299 Score = 33.1 bits (72), Expect = 0.36 Identities = 24/93 (25%), Positives = 28/93 (30%), Gaps = 6/93 (6%) Frame = +2 Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXC---PAXXESPXAPXTEXXPNKRPNHKXXXAR 1000 PG P + PP P P K C PA P P + N P + Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQ 179 Query: 1001 PPTXXXXXPDPP--XPXXPRPPXXPXXNHPXPP 1093 P P P P P P P + P P Sbjct: 180 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 212 >AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen structural gene, probablecuticle component, from embryo to adult (28.7 kD) (col-117) protein. Length = 299 Score = 33.1 bits (72), Expect = 0.36 Identities = 24/93 (25%), Positives = 28/93 (30%), Gaps = 6/93 (6%) Frame = +2 Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXC---PAXXESPXAPXTEXXPNKRPNHKXXXAR 1000 PG P + PP P P K C PA P P + N P + Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPAGPAGAPGPAGPAGDAGANGNPGAPGNDGQ 179 Query: 1001 PPTXXXXXPDPP--XPXXPRPPXXPXXNHPXPP 1093 P P P P P P P + P P Sbjct: 180 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 212 >Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical protein T10B10.1 protein. Length = 428 Score = 32.7 bits (71), Expect = 0.48 Identities = 27/114 (23%), Positives = 36/114 (31%), Gaps = 2/114 (1%) Frame = +2 Query: 755 RRPPXRTXRXPRXXXPXXXDGXTXSXPGPXIXXXXRXPPXTXX--STXXPXPAKXCPAXX 928 +R RT P + + PG R PP T +T PA PA Sbjct: 278 QRQDDRTPPSSGTSAPQPPPRGSTAAPGTRAPPATRAPPATRAPPATTRAPPATTRPAPA 337 Query: 929 ESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXPXXNHPXP 1090 P E + P+ P+ P P P P P P ++P P Sbjct: 338 SQPPVREPETPDSGYPSPAPQEPAHPSPSYPSPSYPSPSYP-SPSYPSPSYPSP 390 >AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical protein Y54E2A.8 protein. Length = 485 Score = 32.7 bits (71), Expect = 0.48 Identities = 14/28 (50%), Positives = 14/28 (50%) Frame = -2 Query: 140 PPPRPXPXXXXXLXXPIPPXPPXPPXPP 57 PPP P P L P PP PP PP P Sbjct: 153 PPPTPIPTPVPILEPP-PPPPPVPPLSP 179 >AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical protein F59E12.9 protein. Length = 1621 Score = 32.7 bits (71), Expect = 0.48 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = -2 Query: 140 PPPRPXPXXXXXLXXPIPPXPPXPP 66 PPP P P P+PP PP PP Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPP 1363 Score = 31.5 bits (68), Expect = 1.1 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = -2 Query: 140 PPPRPXPXXXXXLXXPIPPXPPXPPXPPTLX*RAP 36 P P P P + P PP PP PPT+ +AP Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTMS-KAP 1369 Score = 29.5 bits (63), Expect = 4.4 Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 7/73 (9%) Frame = +2 Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKR-------PNHKXXXARPPTXXXXXPDPPXPXXPR 1054 P P++ CPA ++ N+R NH+ + + PP P P Sbjct: 1287 PQPSESCPAPPKNSSKKRNNRRGNRRNTNEHIQANHEDSDSFSTSRSSSPSPPPPPPPPP 1346 Query: 1055 PPXXPXXNHPXPP 1093 PP P PP Sbjct: 1347 PPSDDLTPVPPPP 1359 >U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein R04E5.8a protein. Length = 997 Score = 32.3 bits (70), Expect = 0.63 Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 5/75 (6%) Frame = +2 Query: 884 STXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXAR----PPTXXXXXP-DPPXPXX 1048 S P P + A SP P P P R PP+ P PP P Sbjct: 121 SPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEP 180 Query: 1049 PRPPXXPXXNHPXPP 1093 PP P P PP Sbjct: 181 RNPPRTPPSPIPPPP 195 >Z75533-3|CAA99822.1| 868|Caenorhabditis elegans Hypothetical protein C54G4.4 protein. Length = 868 Score = 31.9 bits (69), Expect = 0.83 Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 1/77 (1%) Frame = +1 Query: 871 PXXXVHXXXPXGQRXPXXXRKPLCAXDRXXPXQTPQPQXLXRXXXHXQXXXTXP-SXPXX 1047 P +H P G++ P + P +P P + H T P + P Sbjct: 768 PNGNIHVTLPIGRQMGRPSLPPSMLFNPSIPPPSPTPSQILYSFDHEPIYDTPPDTIPYQ 827 Query: 1048 PTTPXRPXXKPPXPPPP 1098 P + P PPPP Sbjct: 828 PESVYERLPDRPAPPPP 844 >U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical protein C50F7.5 protein. Length = 309 Score = 31.9 bits (69), Expect = 0.83 Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 1/38 (2%) Frame = -2 Query: 137 PPRPXPXXXXXLXXPI-PPXPPXPPXPPTLX*RAPLXP 27 PP P P P PP PP PP PPT P P Sbjct: 226 PPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGP 263 Score = 30.3 bits (65), Expect = 2.5 Identities = 18/66 (27%), Positives = 24/66 (36%) Frame = +2 Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXPXX 1075 P P P+ P P + + P+ + + PP P PP P PP P Sbjct: 210 PSPGPVDPSEDPKPSEPPSPGPVD--PSDEPSPSDPP-GPPGPPGPPTRRPPGPPGPPTR 266 Query: 1076 NHPXPP 1093 P PP Sbjct: 267 RPPGPP 272 Score = 29.5 bits (63), Expect = 4.4 Identities = 25/91 (27%), Positives = 27/91 (29%), Gaps = 2/91 (2%) Frame = +2 Query: 827 SXPGPXIXXXXRXP--PXTXXSTXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXAR 1000 S PGP P P + K P P E P+ P Sbjct: 193 SSPGPVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPG- 251 Query: 1001 PPTXXXXXPDPPXPXXPRPPXXPXXNHPXPP 1093 PPT P PP P RPP P PP Sbjct: 252 PPTRRP--PGPPGPPTRRPPGPPGPPTRRPP 280 Score = 28.7 bits (61), Expect = 7.8 Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%) Frame = -2 Query: 140 PPPRPXPXXXXXLXXPIPPX--PPXPPXPPT 54 PP P P P PP PP PP PPT Sbjct: 246 PPGPPGPPTRRPPGPPGPPTRRPPGPPGPPT 276 >L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family protein 1, isoform d protein. Length = 759 Score = 31.9 bits (69), Expect = 0.83 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +1 Query: 58 GGXGGXGGXGGIGXXRXXYXXGXGRGGG 141 GG GG GG GG G + G G GG Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGGSGG 82 >Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical protein C15A11.1 protein. Length = 303 Score = 31.5 bits (68), Expect = 1.1 Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 3/60 (5%) Frame = -2 Query: 227 PXGRXGAXKPXAXTXXAXXXXLVXXGXAXP--PPRPX-PXXXXXLXXPIPPXPPXPPXPP 57 P G+ GA P A G P PP P P PP PP PP PP Sbjct: 158 PDGQPGAPGPNGQPGAAGTTSTNEPGSPGPAGPPGPAGPAGEDAAAPESPPGPPGPPGPP 217 >U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hedgehog-like family)protein 7 protein. Length = 401 Score = 31.5 bits (68), Expect = 1.1 Identities = 12/28 (42%), Positives = 12/28 (42%) Frame = -2 Query: 140 PPPRPXPXXXXXLXXPIPPXPPXPPXPP 57 PPP P P P PP PP PP Sbjct: 112 PPPAPYPQHAVPAPAPYQQQPPPPPPPP 139 Score = 28.7 bits (61), Expect = 7.8 Identities = 23/103 (22%), Positives = 24/103 (23%) Frame = +2 Query: 785 PRXXXPXXXDGXTXSXPGPXIXXXXRXPPXTXXSTXXPXPAKXCPAXXESPXAPXTEXXP 964 P P P P P P A PA +P P Sbjct: 51 PPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQHAVPAP 110 Query: 965 NKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXPXXNHPXPP 1093 P A P PP P P P P P PP Sbjct: 111 APPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPP 153 Score = 28.7 bits (61), Expect = 7.8 Identities = 18/86 (20%), Positives = 22/86 (25%) Frame = +2 Query: 833 PGPXIXXXXRXPPXTXXSTXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTX 1012 P P + + P P PA P P P + PP Sbjct: 80 PAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPP 139 Query: 1013 XXXXPDPPXPXXPRPPXXPXXNHPXP 1090 P P P P P +H P Sbjct: 140 HYPPPPPHYPPPPPAPHSAYIDHSAP 165 >Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical protein F23H12.4 protein. Length = 301 Score = 31.1 bits (67), Expect = 1.5 Identities = 19/58 (32%), Positives = 19/58 (32%) Frame = +2 Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXP 1069 P A P P AP T P K P PP PP P P PP P Sbjct: 109 PAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGP--PGPPGAP 164 >Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein T24B8.4 protein. Length = 866 Score = 31.1 bits (67), Expect = 1.5 Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 6/56 (10%) Frame = -2 Query: 161 VXXGXAXPPPRPX--PXXXXXLXXPIPPXPPX----PPXPPTLX*RAPLXPXXGVG 12 V G PPP P P IPP PP PP PP P P G+G Sbjct: 69 VPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124 >V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caenorhabditis elegansgene Col-1 coding for a collagen. ). Length = 296 Score = 31.1 bits (67), Expect = 1.5 Identities = 19/58 (32%), Positives = 19/58 (32%) Frame = +2 Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXP 1069 P A P P AP T P K P PP PP P P PP P Sbjct: 104 PAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGP--PGPPGAP 159 >J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.elegans (nematode)collagen 1 (col-1) gene, complete cds. ). Length = 296 Score = 31.1 bits (67), Expect = 1.5 Identities = 19/58 (32%), Positives = 19/58 (32%) Frame = +2 Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXP 1069 P A P P AP T P K P PP PP P P PP P Sbjct: 104 PAGAPGKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGP--PGPPGAP 159 >AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical protein Y37A1B.11 protein. Length = 691 Score = 31.1 bits (67), Expect = 1.5 Identities = 14/47 (29%), Positives = 17/47 (36%) Frame = +2 Query: 917 PAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRP 1057 P+ SP T P + P + P P PP P PRP Sbjct: 536 PSPEPSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPPPAKPRP 582 >Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical protein Y49E10.10 protein. Length = 425 Score = 30.7 bits (66), Expect = 1.9 Identities = 30/103 (29%), Positives = 33/103 (32%), Gaps = 3/103 (2%) Frame = +2 Query: 761 PPXRTXRXPRXXXPXXXDGXTXSXPGPXIXXXXRXPPXT--XXSTXXPXPAKXCPAXXES 934 PP T + P T P P PP T +T P P K P + Sbjct: 175 PPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAP-PPPTTNKEVTTVAPVP-KPAPVTAPA 232 Query: 935 PXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDP-PXPXXPRPP 1060 P P E K K A PP P P P P P PP Sbjct: 233 PNPPAPENTTAKVETTKPTKAAPPA---PTPVPNPVPSPPPPP 272 >U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein 33 protein. Length = 304 Score = 30.7 bits (66), Expect = 1.9 Identities = 25/93 (26%), Positives = 28/93 (30%), Gaps = 6/93 (6%) Frame = +2 Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXCPAXXESPXAP---XTEXXPNKRPNHKXXXAR 1000 PG P + PP P P K CP P P + N P A Sbjct: 125 PGAPGLPGNPGKPPVQPCEPITPPPCKPCPDGPAGPPGPPGAPGDAGTNGAPGAPGGDAP 184 Query: 1001 P-PTXXXXXPDPP-XPXXPRPPXXPXXNHPXPP 1093 P P PP P P P P + P P Sbjct: 185 PGEAGPKGPPGPPGSPGAPGEPGRPGDDAPSEP 217 >AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical protein Y48G9A.4 protein. Length = 1115 Score = 30.7 bits (66), Expect = 1.9 Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 3/31 (9%) Frame = -2 Query: 140 PPPRPXPXXXXXLXXPIPPXPPX---PPXPP 57 PPP P P P PP PP PP PP Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPPP 593 Score = 29.5 bits (63), Expect = 4.4 Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 4/32 (12%) Frame = -2 Query: 140 PPPRPXPXXXXXLXXPIPPXPPXP----PXPP 57 PPP P P P PP PP P P PP Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPP 592 >Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein C08B11.5 protein. Length = 388 Score = 30.3 bits (65), Expect = 2.5 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 3/32 (9%) Frame = -2 Query: 140 PPPRPXPXXXXXLXXPIPPXP---PXPPXPPT 54 PP P P + P+PP P P PP PP+ Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPS 292 Score = 29.1 bits (62), Expect = 5.9 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%) Frame = -2 Query: 134 PRPXPXXXXXLXXPIPPXPPX-PPXPPTLX*RAPLXPXXGVG 12 PRP P + P PP PP P PP + P P G Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 326 Score = 28.7 bits (61), Expect = 7.8 Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 1/56 (1%) Frame = +2 Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPP-XPXXPRPP 1060 P P P P P P P+ PP P PP P P PP Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320 >U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding protein protein. Length = 398 Score = 30.3 bits (65), Expect = 2.5 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 3/32 (9%) Frame = -2 Query: 140 PPPRPXPXXXXXLXXPIPPXP---PXPPXPPT 54 PP P P + P+PP P P PP PP+ Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPS 302 Score = 29.1 bits (62), Expect = 5.9 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%) Frame = -2 Query: 134 PRPXPXXXXXLXXPIPPXPPX-PPXPPTLX*RAPLXPXXGVG 12 PRP P + P PP PP P PP + P P G Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 336 Score = 28.7 bits (61), Expect = 7.8 Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 1/56 (1%) Frame = +2 Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPP-XPXXPRPP 1060 P P P P P P P+ PP P PP P P PP Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330 >AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein 51 protein. Length = 435 Score = 30.3 bits (65), Expect = 2.5 Identities = 13/32 (40%), Positives = 13/32 (40%) Frame = -2 Query: 152 GXAXPPPRPXPXXXXXLXXPIPPXPPXPPXPP 57 G A PP P P P PP PP PP Sbjct: 252 GPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPP 283 Score = 29.1 bits (62), Expect = 5.9 Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%) Frame = -2 Query: 152 GXAXPPPRPX-PXXXXXLXXPIPPXPPXPPXPP 57 G A P P P P PP PP PP PP Sbjct: 190 GNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPP 222 >U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cytoskeleton modulator)homolog protein 1, isoform b protein. Length = 781 Score = 29.9 bits (64), Expect = 3.4 Identities = 16/58 (27%), Positives = 18/58 (31%) Frame = -2 Query: 227 PXGRXGAXKPXAXTXXAXXXXLVXXGXAXPPPRPXPXXXXXLXXPIPPXPPXPPXPPT 54 P R A P + A PPP P P PP PP PP+ Sbjct: 601 PENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPS 658 >U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cytoskeleton modulator)homolog protein 1, isoform a protein. Length = 607 Score = 29.9 bits (64), Expect = 3.4 Identities = 16/58 (27%), Positives = 18/58 (31%) Frame = -2 Query: 227 PXGRXGAXKPXAXTXXAXXXXLVXXGXAXPPPRPXPXXXXXLXXPIPPXPPXPPXPPT 54 P R A P + A PPP P P PP PP PP+ Sbjct: 427 PENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPS 484 >U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd related) protein 6 protein. Length = 240 Score = 29.9 bits (64), Expect = 3.4 Identities = 18/60 (30%), Positives = 18/60 (30%) Frame = +2 Query: 914 CPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXPXXNHPXPP 1093 CP P P P P PP PP P P PP P P PP Sbjct: 30 CPTPMCQPRMPCAAPMPMPMP---MPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPP 86 >AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical protein H31G24.1 protein. Length = 109 Score = 29.9 bits (64), Expect = 3.4 Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 4/47 (8%) Frame = -2 Query: 146 AXPPPR----PXPXXXXXLXXPIPPXPPXPPXPPTLX*RAPLXPXXG 18 A PPP P P + PP PP PP P AP P G Sbjct: 62 AIPPPSYAQPPQPYAQSPIAAVPPPPPPPPPQPAPAQAPAPKYPSPG 108 >Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical protein K02E2.2 protein. Length = 1021 Score = 29.5 bits (63), Expect = 4.4 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -2 Query: 95 PIPPXPPXPPXPP 57 P+PP PP PP PP Sbjct: 784 PVPPPPPVPPPPP 796 >Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical protein F55C10.3 protein. Length = 266 Score = 29.5 bits (63), Expect = 4.4 Identities = 22/93 (23%), Positives = 27/93 (29%), Gaps = 6/93 (6%) Frame = +2 Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXC---PAXXESPXAPXTEXXPNKRPNHKXXXAR 1000 PG P + PP P P + C P P P + N P + Sbjct: 87 PGAPGLPGNPGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQ 146 Query: 1001 PPTXXXXXPDPP--XPXXPRPPXXPXXNHPXPP 1093 P P P P P P P + P P Sbjct: 147 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 179 >Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical protein F55C10.2 protein. Length = 299 Score = 29.5 bits (63), Expect = 4.4 Identities = 22/93 (23%), Positives = 27/93 (29%), Gaps = 6/93 (6%) Frame = +2 Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXC---PAXXESPXAPXTEXXPNKRPNHKXXXAR 1000 PG P + PP P P + C P P P + N P + Sbjct: 120 PGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQ 179 Query: 1001 PPTXXXXXPDPP--XPXXPRPPXXPXXNHPXPP 1093 P P P P P P P + P P Sbjct: 180 PGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEP 212 >U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein C34D4.11 protein. Length = 136 Score = 29.5 bits (63), Expect = 4.4 Identities = 22/78 (28%), Positives = 22/78 (28%) Frame = -1 Query: 1092 GGXGWFXXGXXGGRGXXGXGGSGXXXLXVGGRAXXXLWLGRLXGXXSVXGAXGLSXXAGX 913 G GW G GRG G G G G W G G G G G Sbjct: 44 GRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGG 103 Query: 912 SLAGXGXXVDXXVXGGXR 859 G G GG R Sbjct: 104 RGGGGGGRGGGGGGGGGR 121 >U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd related) protein 4 protein. Length = 210 Score = 29.5 bits (63), Expect = 4.4 Identities = 14/38 (36%), Positives = 16/38 (42%) Frame = -2 Query: 140 PPPRPXPXXXXXLXXPIPPXPPXPPXPPTLX*RAPLXP 27 PPP P P P+P PP P PP P+ P Sbjct: 27 PPPCPPPPPPMCAPPPLP-CPPPPICPPQFCPPPPMCP 63 Score = 28.7 bits (61), Expect = 7.8 Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%) Frame = -2 Query: 146 AXPP-PRPXPXXXXXLXXPIPPXPPXPPXPP 57 A PP P P P P PP P PP PP Sbjct: 39 APPPLPCPPPPICPPQFCPPPPMCPPPPPPP 69 >AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical protein Y116A8C.32 protein. Length = 699 Score = 29.5 bits (63), Expect = 4.4 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = -2 Query: 152 GXAXPPPRPXPXXXXXLXXPIPPXPPXPPXPPTLX*RAPLXP 27 G + P P P P P PP PP P +L AP P Sbjct: 656 GSSMPMPVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPP 697 >AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein protein. Length = 699 Score = 29.5 bits (63), Expect = 4.4 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = -2 Query: 152 GXAXPPPRPXPXXXXXLXXPIPPXPPXPPXPPTLX*RAPLXP 27 G + P P P P P PP PP P +L AP P Sbjct: 656 GSSMPMPVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPP 697 >Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical protein Y41E3.2 protein. Length = 289 Score = 29.1 bits (62), Expect = 5.9 Identities = 16/56 (28%), Positives = 17/56 (30%) Frame = +2 Query: 917 PAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXPXXNHP 1084 P P AP P + P PP PP P P P P N P Sbjct: 104 PGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGP--PGQPGIPGDNGP 157 >U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical protein F54D11.2 protein. Length = 1145 Score = 29.1 bits (62), Expect = 5.9 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%) Frame = -2 Query: 140 PPPRPXPXXXXXLXXPIPPXPPXP-PXPPTLX*RAPLXP 27 PPP P P + P+ PP P P PP R P+ P Sbjct: 1103 PPPPPLPILQNPVATPMSQQPPLPSPAPPPP--RGPVDP 1139 >U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical protein R144.4a protein. Length = 360 Score = 29.1 bits (62), Expect = 5.9 Identities = 12/31 (38%), Positives = 13/31 (41%) Frame = -2 Query: 146 AXPPPRPXPXXXXXLXXPIPPXPPXPPXPPT 54 A PPP P P P PP PP P+ Sbjct: 154 APPPPPPPPPVSVPSSKPTPPPPPPAQQKPS 184 >U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical protein R144.4b protein. Length = 362 Score = 29.1 bits (62), Expect = 5.9 Identities = 12/31 (38%), Positives = 13/31 (41%) Frame = -2 Query: 146 AXPPPRPXPXXXXXLXXPIPPXPPXPPXPPT 54 A PPP P P P PP PP P+ Sbjct: 154 APPPPPPPPPVSVPSSKPTPPPPPPAQQKPS 184 >Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical protein F14F7.1 protein. Length = 305 Score = 28.7 bits (61), Expect = 7.8 Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%) Frame = +2 Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPT--XXXXXPDPPXPXXPR 1054 P P K CP P P P RP RP T P PP P PR Sbjct: 146 PTPCKPCPGGRPGPPGP-----PG-RPGSDGQPGRPATGGGAAPRPGPPGPKGPR 194 >Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical protein ZC376.8 protein. Length = 278 Score = 28.7 bits (61), Expect = 7.8 Identities = 11/33 (33%), Positives = 14/33 (42%) Frame = +2 Query: 971 RPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXP 1069 +P K + P+ P PP P P PP P Sbjct: 36 KPKKKKDVSGAPSAESPPPPPPAPKVPEPPKAP 68 >Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical protein F54B11.2 protein. Length = 304 Score = 28.7 bits (61), Expect = 7.8 Identities = 17/55 (30%), Positives = 17/55 (30%) Frame = +2 Query: 896 PXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPP 1060 P P K CPA P P P A P P PP P P P Sbjct: 148 PPPCKPCPAGPPGPPGPDGPAGPAGPDGEAGSPAAP-----SPPGPPGPSGPAGP 197 >Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein W01B6.7 protein. Length = 301 Score = 28.7 bits (61), Expect = 7.8 Identities = 14/32 (43%), Positives = 14/32 (43%) Frame = +1 Query: 58 GGXGGXGGXGGIGXXRXXYXXGXGRGGGXAKP 153 GG GG GG GG G G GG KP Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKP 116 >Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical protein T05A1.2 protein. Length = 300 Score = 28.7 bits (61), Expect = 7.8 Identities = 17/59 (28%), Positives = 17/59 (28%) Frame = +2 Query: 917 PAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXPXXNHPXPP 1093 P P AP P K P PP P P P P P P P P Sbjct: 115 PGTPGRPGAPGAPGHPGKPPQSPCEPLTPPPCPACPPGP--PGAPGAPGKPGSEGPPGP 171 >V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caenorhabditis elegansgene Col-2 coding for a collagen. ). Length = 301 Score = 28.7 bits (61), Expect = 7.8 Identities = 14/32 (43%), Positives = 14/32 (43%) Frame = +1 Query: 58 GGXGGXGGXGGIGXXRXXYXXGXGRGGGXAKP 153 GG GG GG GG G G GG KP Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKP 116 >U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein 34 protein. Length = 299 Score = 28.7 bits (61), Expect = 7.8 Identities = 19/80 (23%), Positives = 22/80 (27%), Gaps = 1/80 (1%) Frame = +2 Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPT 1009 PG P + PP P P K CP P P + P + Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAA 179 Query: 1010 XXXXXPDPPXPXXPRPPXXP 1069 P P P P P P Sbjct: 180 PGEPGPKGP-PGPPGAPGAP 198 >U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein 43 protein. Length = 303 Score = 28.7 bits (61), Expect = 7.8 Identities = 16/51 (31%), Positives = 16/51 (31%) Frame = +2 Query: 917 PAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXP 1069 P P AP P K P PP PP P P PP P Sbjct: 118 PGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGP--PGPPGAP 166 >U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astacin protease protein15 protein. Length = 571 Score = 28.7 bits (61), Expect = 7.8 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = -2 Query: 95 PIPPXPPXPPXPPT 54 PI P PP PP PPT Sbjct: 419 PIQPLPPVPPLPPT 432 >J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans (nematode)collagen 2 (col-2) gene, complete cds. ). Length = 301 Score = 28.7 bits (61), Expect = 7.8 Identities = 14/32 (43%), Positives = 14/32 (43%) Frame = +1 Query: 58 GGXGGXGGXGGIGXXRXXYXXGXGRGGGXAKP 153 GG GG GG GG G G GG KP Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKP 116 >AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen structural gene, probabledorsal and ventral cuticle component, from embryo to adult,but maximal in dauer (28.0 kD) (col-2) protein. Length = 301 Score = 28.7 bits (61), Expect = 7.8 Identities = 14/32 (43%), Positives = 14/32 (43%) Frame = +1 Query: 58 GGXGGXGGXGGIGXXRXXYXXGXGRGGGXAKP 153 GG GG GG GG G G GG KP Sbjct: 85 GGAGGGGGGGGGGCDGCCNPGPPGPGGSPGKP 116 >AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular collagen RAM-4 protein. Length = 299 Score = 28.7 bits (61), Expect = 7.8 Identities = 19/80 (23%), Positives = 22/80 (27%), Gaps = 1/80 (1%) Frame = +2 Query: 833 PG-PXIXXXXRXPPXTXXSTXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPT 1009 PG P + PP P P K CP P P + P + Sbjct: 120 PGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAA 179 Query: 1010 XXXXXPDPPXPXXPRPPXXP 1069 P P P P P P Sbjct: 180 PGEPGPKGP-PGPPGAPGAP 198 >AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical protein ZC123.1 protein. Length = 730 Score = 28.7 bits (61), Expect = 7.8 Identities = 13/32 (40%), Positives = 13/32 (40%) Frame = -2 Query: 152 GXAXPPPRPXPXXXXXLXXPIPPXPPXPPXPP 57 G PP P P P P PP PP PP Sbjct: 120 GGVPAPPNP-PRTCCPPPTPAAPPPPPPPPPP 150 >AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform b protein. Length = 518 Score = 28.7 bits (61), Expect = 7.8 Identities = 20/70 (28%), Positives = 21/70 (30%) Frame = +2 Query: 884 STXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPX 1063 S P P K P S P + P PPT P PP P PP Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP--PPPPAGGSPPPPR 293 Query: 1064 XPXXNHPXPP 1093 P PP Sbjct: 294 AGSPPPPPPP 303 >AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform c protein. Length = 539 Score = 28.7 bits (61), Expect = 7.8 Identities = 20/70 (28%), Positives = 21/70 (30%) Frame = +2 Query: 884 STXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPX 1063 S P P K P S P + P PPT P PP P PP Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP--PPPPAGGSPPPPR 314 Query: 1064 XPXXNHPXPP 1093 P PP Sbjct: 315 AGSPPPPPPP 324 >AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 75, isoform a protein. Length = 524 Score = 28.7 bits (61), Expect = 7.8 Identities = 20/70 (28%), Positives = 21/70 (30%) Frame = +2 Query: 884 STXXPXPAKXCPAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPX 1063 S P P K P S P + P PPT P PP P PP Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP--PPPPAGGSPPPPR 299 Query: 1064 XPXXNHPXPP 1093 P PP Sbjct: 300 AGSPPPPPPP 309 >AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen protein. Length = 303 Score = 28.7 bits (61), Expect = 7.8 Identities = 16/51 (31%), Positives = 16/51 (31%) Frame = +2 Query: 917 PAXXESPXAPXTEXXPNKRPNHKXXXARPPTXXXXXPDPPXPXXPRPPXXP 1069 P P AP P K P PP PP P P PP P Sbjct: 118 PGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGP--PGPPGAP 166 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,527,401 Number of Sequences: 27780 Number of extensions: 191876 Number of successful extensions: 3162 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 813 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2441 length of database: 12,740,198 effective HSP length: 82 effective length of database: 10,462,238 effective search space used: 2960813354 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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