BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP05_F_H11 (871 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical ... 32 0.46 Z49937-6|CAA90185.2| 453|Caenorhabditis elegans Hypothetical pr... 31 1.1 Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical p... 30 1.9 Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical pr... 29 4.3 AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 29 4.3 Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical pr... 28 10.0 AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription... 28 10.0 AF047660-1|AAC04431.1| 900|Caenorhabditis elegans Osm-9 and cap... 28 10.0 >AF047657-7|AAK18943.1| 424|Caenorhabditis elegans Hypothetical protein F37B4.7 protein. Length = 424 Score = 32.3 bits (70), Expect = 0.46 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +2 Query: 710 IDWRKGVRRSLSQNDVMSYFMEDVDPNTYMYYLHM 814 ++W++ + L N+V E VD ++YM YL M Sbjct: 183 VEWKEAYEKKLEDNNVQGNLKEIVDQSSYMDYLRM 217 >Z49937-6|CAA90185.2| 453|Caenorhabditis elegans Hypothetical protein F14F3.3 protein. Length = 453 Score = 31.1 bits (67), Expect = 1.1 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +1 Query: 226 ILQPTMFEDIKEIAKEYNIEKSCDKYMNVDVVK-QFMEMYKMGMLPRGETFVHTNELQME 402 I+ PT ++ NIE S D +N+D+ K +F + ++ GM + L + Sbjct: 272 IMGPTDLNAFDKLKTRENIEMSSDAIVNLDIPKVEFSDGFRDGMKAWNRSVQTWLALYVH 331 Query: 403 EAVKVFRV 426 VKV RV Sbjct: 332 SRVKVMRV 339 >Z81542-10|CAB04419.4| 411|Caenorhabditis elegans Hypothetical protein F49A5.7 protein. Length = 411 Score = 30.3 bits (65), Expect = 1.9 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Frame = +2 Query: 488 STEACSSTLLLPRASTEPTARVS-TCPLLTRSIPTSSLTAMSSVKPL 625 + EA SST LL ST TA +S T ++RSI + TA ++++PL Sbjct: 91 TNEASSSTKLL---STSSTAEISSTTRTVSRSIKPETSTASTTIRPL 134 >Z77657-6|CAB01150.2| 607|Caenorhabditis elegans Hypothetical protein F08H9.1 protein. Length = 607 Score = 29.1 bits (62), Expect = 4.3 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = -2 Query: 468 RSPHENIEVLSVVEDSEDFD 409 R+P+ENI++L +DSED D Sbjct: 581 RAPYENIDLLLSTDDSEDID 600 >AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical protein K07D4.6 protein. Length = 389 Score = 29.1 bits (62), Expect = 4.3 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 3/78 (3%) Frame = +2 Query: 485 GSTEACSS---TLLLPRASTEPTARVSTCPLLTRSIPTSSLTAMSSVKPL**R*LKPPRT 655 G+TE S+ T +TEPT ST T ++PTS+ T ++ P T Sbjct: 257 GTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTT-----TTTPTT 311 Query: 656 RSSGNTTAITVTDDHLVV 709 ++ TT+ T +DD L V Sbjct: 312 TTT--TTSTTTSDDLLWV 327 >Z75541-6|CAA99857.2| 644|Caenorhabditis elegans Hypothetical protein F52B5.5a protein. Length = 644 Score = 27.9 bits (59), Expect = 10.0 Identities = 8/22 (36%), Positives = 16/22 (72%) Frame = +1 Query: 262 IAKEYNIEKSCDKYMNVDVVKQ 327 + + N+ + C+K+M +DV+KQ Sbjct: 212 VQSDMNLNEDCEKWMEIDVLKQ 233 >AF440800-1|AAL28139.1| 644|Caenorhabditis elegans transcription factor CEP-1 protein. Length = 644 Score = 27.9 bits (59), Expect = 10.0 Identities = 8/22 (36%), Positives = 16/22 (72%) Frame = +1 Query: 262 IAKEYNIEKSCDKYMNVDVVKQ 327 + + N+ + C+K+M +DV+KQ Sbjct: 212 VQSDMNLNEDCEKWMEIDVLKQ 233 >AF047660-1|AAC04431.1| 900|Caenorhabditis elegans Osm-9 and capsaicin receptor-relatedprotein 2 protein. Length = 900 Score = 27.9 bits (59), Expect = 10.0 Identities = 12/51 (23%), Positives = 28/51 (54%) Frame = -3 Query: 389 SLVWTKVSPRGSMPILYISMNCLTTSTFMYLSQLFSMLYSLAISLMSSNMV 237 + V T + G +LY ++ +T +++ ++ +L+ L +S+M NM+ Sbjct: 709 AFVRTFILTIGEFTVLYRNLALCPANTMVWIGKVVFILFELFVSIMQFNML 759 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,489,269 Number of Sequences: 27780 Number of extensions: 346189 Number of successful extensions: 920 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 879 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 920 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2181923744 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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