Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H10
         (966 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    25   0.88 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   8.2  

>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 9/29 (31%), Positives = 20/29 (68%)
 Frame = +3

Query: 177 FGLGSSRQLLQGS*KNGSEGSRTPVISAA 263
           +GL +  +++QG+  N  +GS+  ++S+A
Sbjct: 62  YGLSTKPKIMQGAISNHIQGSKPNILSSA 90


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 330 LWNNLSSILVRELWLLPGCRLLEPR 256
           +WN L+  +   +W+ P   LL+ R
Sbjct: 531 IWNPLTDTIPIHVWIHPWIPLLDTR 555


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = -3

Query: 145 NENFSRIXILYFSRNSKLQTYRA 77
           N NF +I  ++ +R+ +++ Y+A
Sbjct: 108 NNNFQQIDKIFKTRDDRVKVYQA 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,103
Number of Sequences: 336
Number of extensions: 2762
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27306312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)