Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_H10
(966 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.26
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.8
01_01_0083 + 631196-631675 31 1.8
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 29 4.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 5.5
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 5.5
07_01_0083 - 629819-630260,631695-631838,632906-633186 29 7.3
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 29 7.3
09_02_0495 + 9880714-9881196 28 9.7
04_04_0058 - 22416949-22418196 28 9.7
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 33.5 bits (73), Expect = 0.26
Identities = 20/56 (35%), Positives = 21/56 (37%)
Frame = -2
Query: 899 GYPPEFXGKPXXPPLXGXEXRXPPPXXXXGPXXXLXXGXGXGGXKXKXPXSPGGGG 732
G PP G P PL G R P GP G GG + P GGGG
Sbjct: 89 GLPPGGGGAPG--PLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGG 142
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -2
Query: 851 GXEXRXPPPXXXXGPXXXLXXGXGXGGXKXKXPXSPGGGGG 729
G PP G G G GG + P GGGGG
Sbjct: 154 GGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGG 194
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = -1
Query: 903 PGVSPRIXGKTXXPPXGGXGXPXXPPPXXXGAXXFXXXXKXXG-XPKKXXPXFPGGGGGV 727
P + I G PP GG G P PPP G P P GG GG
Sbjct: 1139 PPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGP 1198
Query: 726 XXXXRKPXP 700
P P
Sbjct: 1199 PTPPGAPAP 1207
Score = 28.7 bits (61), Expect = 7.3
Identities = 25/82 (30%), Positives = 25/82 (30%)
Frame = +1
Query: 649 PPXLGFLXFFPXSRGXGGXGFSXXXXNPPPPPGEXGXXFFXPPXPFPXXXKXXGPXXXXG 828
PP GF P GG PPPPP PP P P P G
Sbjct: 1164 PPPAGFRGGTPPPNAHGGVA-------PPPPPPRGHGGVGGPPTP-PGAPAPPMPPGVPG 1215
Query: 829 GGXRXSXPXXGGXXGFPXNSGG 894
G P G G P GG
Sbjct: 1216 G-----PPPPPGGRGLPAPPGG 1232
>01_01_0083 + 631196-631675
Length = 159
Score = 30.7 bits (66), Expect = 1.8
Identities = 21/69 (30%), Positives = 22/69 (31%)
Frame = -2
Query: 896 YPPEFXGKPXXPPLXGXEXRXPPPXXXXGPXXXLXXGXGXGGXKXKXPXSPGGGGGXXXX 717
YPP PP PPP G G G P + GGGGG
Sbjct: 57 YPPPSSSSSNTPPSSSSYWNYPPPQ-----------GGGGGYIPYYQPPAGGGGGGGGFN 105
Query: 716 XENPFPPXP 690
P PP P
Sbjct: 106 YPAPPPPNP 114
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 691 GXGGXGFSXXXXNPPPPP 744
G GG GFS PPPPP
Sbjct: 23 GGGGGGFSPTAAKPPPPP 40
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +1
Query: 730 PPPPPGEXGXXFFXPPXP-FPXXXKXXGP 813
PPPPPG G PP P P + GP
Sbjct: 370 PPPPPGAAGRGGGGPPPPALPGGPRARGP 398
Score = 28.3 bits (60), Expect = 9.7
Identities = 23/84 (27%), Positives = 25/84 (29%), Gaps = 6/84 (7%)
Frame = -2
Query: 893 PPEFXGKPXXPP------LXGXEXRXPPPXXXXGPXXXLXXGXGXGGXKXKXPXSPGGGG 732
PP P PP G PPP P G G G P + G GG
Sbjct: 324 PPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPG--PPPPPGAAGRGG 381
Query: 731 GXXXXXENPFPPXPRDXGKXKRKP 660
G P P R K+ P
Sbjct: 382 GGPPPPALPGGPRARGPPPFKKSP 405
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 29.1 bits (62), Expect = 5.5
Identities = 18/59 (30%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Frame = -2
Query: 896 YPPEFXGKPXXPPLXGXEXRXP---PPXXXXGPXXXLXXGXGXGGXKXKXPXSPGGGGG 729
YPP + P PP G PP G G G G GGGGG
Sbjct: 350 YPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPPPYHGGGGGGGG 408
>07_01_0083 - 629819-630260,631695-631838,632906-633186
Length = 288
Score = 28.7 bits (61), Expect = 7.3
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -2
Query: 197 PGAAETEAVAKTISETRKRKFFENXHFVFFAKFETSNVPSCNELEXXNFKVLRNCP 30
P AA TEA +K+++ +KR F F K E ++ K ++N P
Sbjct: 86 PAAASTEAASKSLTPGKKRA--RQPRFAFMTKSEIDHLEDGYRWRKYGQKAVKNSP 139
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2
Query: 236 TL*PIFSRSLKKLPGAAETEAVAKTIS 156
TL P+FS +LKKL + E+EA K+ S
Sbjct: 457 TLRPVFSSALKKLEESLESEATKKSKS 483
>09_02_0495 + 9880714-9881196
Length = 160
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 649 PPXLGFLXFFPXSRGXGGXGFSXXXXNPPPPPGEXGXXFFXP 774
PP G G GG G PPPPPG F P
Sbjct: 53 PPPAGSSSSSSSGGGDGGAGGLFGGTYPPPPPGVMPGAFAPP 94
>04_04_0058 - 22416949-22418196
Length = 415
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/66 (27%), Positives = 20/66 (30%)
Frame = +1
Query: 697 GGXGFSXXXXNPPPPPGEXGXXFFXPPXPFPXXXKXXGPXXXXGGGXRXSXPXXGGXXGF 876
GG G S +PPPP P P+ P G GG G
Sbjct: 17 GGYGCSSWPLSPPPPSVILTPFASPSPAPWACPPAFPAPSPSPLHGAAGGRRDQGGYHGS 76
Query: 877 PXNSGG 894
P GG
Sbjct: 77 PPGGGG 82
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,156,385
Number of Sequences: 37544
Number of extensions: 439337
Number of successful extensions: 1789
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1696
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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