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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_H09
         (1059 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.68 
SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05)               31   2.1  
SB_28064| Best HMM Match : DUF1174 (HMM E-Value=4.5)                   30   2.7  
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.7  
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)                  30   3.6  
SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.3  
SB_7446| Best HMM Match : SH2 (HMM E-Value=2.7e-22)                    29   6.3  
SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4)                      29   6.3  
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)                  29   6.3  
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.3  
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)                  29   6.3  
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)               29   6.3  
SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)                  29   8.3  
SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   8.3  

>SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 509

 Score = 32.3 bits (70), Expect = 0.68
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -2

Query: 713 LXGXGGXXGAGXWGXGXGXVGGIGGNXXXXVKGSXLXGG 597
           L G GG  G G  G G G +GG+GG       G+ + GG
Sbjct: 232 LGGLGGVGGLGGVG-GLGGIGGLGGGGVIAGAGAGIGGG 269


>SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05)
          Length = 267

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 17/55 (30%), Positives = 20/55 (36%)
 Frame = -2

Query: 707 GXGGXXGAGXWGXGXGXVGGIGGNXXXXVKGSXLXGGXXXXRTKXGASGNXRVAH 543
           G GG  G G  G G G  GG GG            GG    R +  +S +    H
Sbjct: 89  GGGGFGGGGGGGFGGGGGGGFGGGGGGGGGFGGGGGGGFGSRARPASSNSNACRH 143


>SB_28064| Best HMM Match : DUF1174 (HMM E-Value=4.5)
          Length = 404

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 16/50 (32%), Positives = 18/50 (36%)
 Frame = -2

Query: 707 GXGGXXGAGXWGXGXGXVGGIGGNXXXXVKGSXLXGGXXXXRTKXGASGN 558
           G  G  G G  G G     G+GGN      G+ L G         G  GN
Sbjct: 182 GLAGTKGIGEHGTGLAGTKGMGGNKGIGEHGTGLGGNKGIGEYGTGLGGN 231



 Score = 28.7 bits (61), Expect = 8.3
 Identities = 19/57 (33%), Positives = 23/57 (40%), Gaps = 7/57 (12%)
 Frame = -2

Query: 707 GXGGXXGAGXWGXGXGX---VG----GIGGNXXXXVKGSXLXGGXXXXRTKXGASGN 558
           G GG  G G +G G G    +G    G+GGN      G+ L G         G  GN
Sbjct: 240 GLGGNKGIGEYGTGLGGNKGIGEYGTGLGGNKGIGEHGTGLGGNKGKGEYGTGLGGN 296



 Score = 28.7 bits (61), Expect = 8.3
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 7/57 (12%)
 Frame = -2

Query: 707 GXGGXXGAGXWGXGXGX---VG----GIGGNXXXXVKGSXLXGGXXXXRTKXGASGN 558
           G GG  G G +G G G    +G    G+GGN      G+ L G         G +GN
Sbjct: 253 GLGGNKGIGEYGTGLGGNKGIGEHGTGLGGNKGKGEYGTGLGGNKGKCEYGTGLAGN 309


>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 290

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 20/72 (27%), Positives = 26/72 (36%)
 Frame = +2

Query: 599 HXPXXNPXXXPXXSHQSLQPXXXPDPXTPPLXXHPXXPTXVPLCALXSXSPPXPXPWXXI 778
           + P  NP   P  +  +  P   P+P  PP    P  P   P  A     PP P P   I
Sbjct: 187 YPPPPNPPYPPPPNAPNPPP---PNPPYPPPPNAPNPPYPPPPNAPNPPYPPPPNPQFAI 243

Query: 779 SXLXRXXPXPPD 814
           +      P  P+
Sbjct: 244 ALCLGHGPRSPE 255


>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
          Length = 248

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 14/32 (43%), Positives = 15/32 (46%)
 Frame = -2

Query: 707 GXGGXXGAGXWGXGXGXVGGIGGNXXXXVKGS 612
           G GG  G G +G G G  GG GG       GS
Sbjct: 206 GYGGGRGGGGYGGGRGGGGGYGGGRRDYGGGS 237


>SB_48719| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1880

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = -2

Query: 707 GXGGXXGAGXWGXGXGXVGGIGGNXXXXVKGSXLXGG 597
           G G   G G WG   G  GG GG      +G    GG
Sbjct: 152 GRGRGGGEGGWGGRGGNGGGRGGGEGGGGRGRGTGGG 188


>SB_7446| Best HMM Match : SH2 (HMM E-Value=2.7e-22)
          Length = 699

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 668 PDPXTPPLXXHPXXPTXVPLCALXSXSPPXPXPW 769
           P P  PP+  HP   +  P   + S  PP P P+
Sbjct: 383 PLPTPPPMSTHPEFTSKPPPPPVASKPPPKPVPY 416


>SB_1800| Best HMM Match : LEA_4 (HMM E-Value=7.4)
          Length = 186

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 18/49 (36%), Positives = 19/49 (38%)
 Frame = -2

Query: 707 GXGGXXGAGXWGXGXGXVGGIGGNXXXXVKGSXLXGGXXXXRTKXGASG 561
           G GG  G G  G G G  GG GG       G    GG        GA+G
Sbjct: 52  GGGGATGGGATGGGGGATGGGGGATGG--HGGATGGGGGATGDGGGATG 98


>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
          Length = 252

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = -2

Query: 707 GXGGXXGAGXWGXGXGXVGGIGGNXXXXVKGSXLXGG 597
           G GG  G G +G G G  GG GG       G    GG
Sbjct: 210 GYGGGRGGGGYGGGHGG-GGYGGGGRHDYGGGSKGGG 245


>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1212

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 16/52 (30%), Positives = 18/52 (34%)
 Frame = +3

Query: 534  PRTMGNPPVTGXTXFGSXXLPPTXQXRTLXXXPXVPTNPSNXSXXXTPXPRP 689
            P     PP        S  +PP  Q   +   P  PT P       TP PRP
Sbjct: 1066 PSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPAHPTEPPPRQPKPTPAPRP 1117


>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
          Length = 457

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 16/54 (29%), Positives = 18/54 (33%)
 Frame = +2

Query: 605 PXXNPXXXPXXSHQSLQPXXXPDPXTPPLXXHPXXPTXVPLCALXSXSPPXPXP 766
           P  +P   P     S  P   P P  PP    P  P   P     +  PP P P
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427



 Score = 28.7 bits (61), Expect = 8.3
 Identities = 16/54 (29%), Positives = 16/54 (29%)
 Frame = +2

Query: 605 PXXNPXXXPXXSHQSLQPXXXPDPXTPPLXXHPXXPTXVPLCALXSXSPPXPXP 766
           P   P   P       QP   P P  PP    P  P   P        PP P P
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431


>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
          Length = 867

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 18/61 (29%), Positives = 21/61 (34%)
 Frame = +2

Query: 638 SHQSLQPXXXPDPXTPPLXXHPXXPTXVPLCALXSXSPPXPXPWXXISXLXRXXPXPPDL 817
           SH +  P     P  PP    P  P   P  +     PP P P      L    P PP +
Sbjct: 193 SHPT-SPSQITQPPPPPPRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPI 251

Query: 818 P 820
           P
Sbjct: 252 P 252


>SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37)
          Length = 1063

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 15/37 (40%), Positives = 16/37 (43%)
 Frame = -2

Query: 707 GXGGXXGAGXWGXGXGXVGGIGGNXXXXVKGSXLXGG 597
           G GG  G G  G G G  GG GG+      G    GG
Sbjct: 780 GGGGDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGG 816



 Score = 28.7 bits (61), Expect = 8.3
 Identities = 17/50 (34%), Positives = 18/50 (36%)
 Frame = -2

Query: 707 GXGGXXGAGXWGXGXGXVGGIGGNXXXXVKGSXLXGGXXXXRTKXGASGN 558
           G GG  G G  G G G  GG GG       G    GG        G  G+
Sbjct: 783 GDGGGGGGGGGGGGGGGGGGDGGGYGDGDGGGGGGGGGGGGGGDGGGYGD 832


>SB_26646| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 152

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
 Frame = -2

Query: 707 GXGGXXGAGXWGXGXGXVGGIGGNXXXXVKGSXLXG-GXXXXRTKXGASGN 558
           G G   GAG  G G G  GG GG       G    G G        GA GN
Sbjct: 48  GAGNGVGAGGCGCGGGNDGGNGGGGAGNGGGGGGAGNGGAAGAAGAGAGGN 98


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,227,822
Number of Sequences: 59808
Number of extensions: 181542
Number of successful extensions: 723
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3189638717
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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